RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 IGKV6D-41A0A0C4DH26 115 aa10.74□□□□□ -0.69
DHFR-202ENST00000504396 M0R2C6 588 aa10.74□□□□□ -0.69
DHFR-202ENST00000504396 CTAGE5O15320 804 aa10.74□□□□□ -0.69
DHFR-202ENST00000504396 RNF113AO15541 343 aaKnown RBP10.74□□□□□ -0.69
DHFR-202ENST00000504396 B4GALT4O60513 344 aa10.74□□□□□ -0.69
DHFR-202ENST00000504396 ZFYP08048 801 aaPredicted RBP10.74□□□□□ -0.69
DHFR-202ENST00000504396 SMPD1P17405 629 aa10.74□□□□□ -0.69
DHFR-202ENST00000504396 SLC19A1P41440 591 aa10.74□□□□□ -0.69
DHFR-202ENST00000504396 SNAP25P60880 206 aa10.74□□□□□ -0.69
DHFR-202ENST00000504396 LRRFIP1Q32MZ4 808 aaKnown RBP10.74□□□□□ -0.69
DHFR-202ENST00000504396 DEFB128Q7Z7B8 93 aa10.74□□□□□ -0.69
DHFR-202ENST00000504396 FAM160B2Q86V87 743 aa10.74□□□□□ -0.69
DHFR-202ENST00000504396 FAM133AQ8N9E0 248 aa10.74□□□□□ -0.69
DHFR-202ENST00000504396 KBTBD3Q8NAB2 608 aa10.74□□□□□ -0.69
DHFR-202ENST00000504396 CHURC1Q8WUH1 139 aa10.74□□□□□ -0.69
DHFR-202ENST00000504396 NOC4LQ9BVI4 516 aaKnown RBP10.74□□□□□ -0.69
DHFR-202ENST00000504396 KATNBL1Q9H079 304 aa10.74□□□□□ -0.69
DHFR-202ENST00000504396 EPB41L4AQ9HCS5 686 aaPredicted RBP10.74□□□□□ -0.69
DHFR-202ENST00000504396 PDGFCQ9NRA1 345 aa10.74□□□□□ -0.69
DHFR-202ENST00000504396 STX8Q9UNK0 236 aa10.74□□□□□ -0.69
DHFR-202ENST00000504396 ASTN1O14525 1302 aa10.74□□□□□ -0.69
DHFR-202ENST00000504396 TTC28Q96AY4 2481 aa10.73□□□□□ -0.69
DHFR-202ENST00000504396 ATP2A2P16615 1042 aaKnown RBP10.73□□□□□ -0.69
DHFR-202ENST00000504396 MCCP23508 829 aa10.73□□□□□ -0.69
DHFR-202ENST00000504396 TFAP4Q01664 338 aa10.73□□□□□ -0.69
DHFR-202ENST00000504396 TFF2Q03403 129 aa10.73□□□□□ -0.69
DHFR-202ENST00000504396 AAK1Q2M2I8 961 aa10.73□□□□□ -0.69
DHFR-202ENST00000504396 CCDC96Q2M329 555 aa10.73□□□□□ -0.69
DHFR-202ENST00000504396 TKFCQ3LXA3 575 aa10.73□□□□□ -0.69
DHFR-202ENST00000504396 FAM47CQ5HY64 1035 aa10.73□□□□□ -0.69
DHFR-202ENST00000504396 KIAA1211Q6ZU35 1233 aa10.73□□□□□ -0.69
DHFR-202ENST00000504396 KCTD1Q719H9 257 aa10.73□□□□□ -0.69
DHFR-202ENST00000504396 FAM122AQ96E09 287 aa10.73□□□□□ -0.69
DHFR-202ENST00000504396 NAPBQ9H115 298 aa10.73□□□□□ -0.69
DHFR-202ENST00000504396 WNT8AQ9H1J5 351 aa10.73□□□□□ -0.69
DHFR-202ENST00000504396 CERS4Q9HA82 394 aa10.73□□□□□ -0.69
DHFR-202ENST00000504396 CCPG1Q9ULG6 757 aa10.73□□□□□ -0.69
DHFR-202ENST00000504396 GNEQ9Y223 722 aaKnown RBP10.73□□□□□ -0.69
DHFR-202ENST00000504396 PLIN4Q96Q06 1357 aa10.73□□□□□ -0.69
DHFR-202ENST00000504396 TCF20Q9UGU0 1960 aaKnown RBP10.72□□□□□ -0.69
DHFR-202ENST00000504396 TSPY2A6NKD2 308 aa10.72□□□□□ -0.69
DHFR-202ENST00000504396 MYL3P08590 195 aa10.72□□□□□ -0.69
DHFR-202ENST00000504396 CHMP4BP1P59074 171 aa10.72□□□□□ -0.69
DHFR-202ENST00000504396 MSS51Q4VC12 460 aa10.72□□□□□ -0.69
DHFR-202ENST00000504396 TMEM67Q5HYA8 995 aa10.72□□□□□ -0.69
DHFR-202ENST00000504396 LIAT1Q6ZQX7 453 aa10.72□□□□□ -0.69
DHFR-202ENST00000504396 SLC43A3Q8NBI5 491 aa10.72□□□□□ -0.69
DHFR-202ENST00000504396 NEDD1Q8NHV4 660 aa10.72□□□□□ -0.69
DHFR-202ENST00000504396 STAG1Q8WVM7 1258 aa10.72□□□□□ -0.69
DHFR-202ENST00000504396 ALDH8A1Q9H2A2 487 aaPredicted RBP10.72□□□□□ -0.69
DHFR-202ENST00000504396 FCF1Q9Y324 198 aaKnown RBP10.72□□□□□ -0.69
DHFR-202ENST00000504396 PCDHA11Q9Y5I1 949 aa10.72□□□□□ -0.69
DHFR-202ENST00000504396 ZNF536O15090 1300 aa10.71□□□□□ -0.69
DHFR-202ENST00000504396 GRIN2DO15399 1336 aa10.71□□□□□ -0.69
DHFR-202ENST00000504396 PATL2C9JE40 543 aaKnown RBP10.71□□□□□ -0.69
DHFR-202ENST00000504396 PLA2G6O60733 806 aa10.71□□□□□ -0.69
DHFR-202ENST00000504396 CA3P07451 260 aa10.71□□□□□ -0.69
DHFR-202ENST00000504396 SUPT20HL2P0C7V6 817 aa10.71□□□□□ -0.69
DHFR-202ENST00000504396 CYP2C9P11712 490 aa10.71□□□□□ -0.69
DHFR-202ENST00000504396 ACTN1P12814 892 aa10.71□□□□□ -0.69
DHFR-202ENST00000504396 PLA2G5P39877 138 aa10.71□□□□□ -0.69
DHFR-202ENST00000504396 KCNQ1P51787 676 aa10.71□□□□□ -0.69
DHFR-202ENST00000504396 PPARAQ07869 468 aa10.71□□□□□ -0.69
DHFR-202ENST00000504396 TTLL4Q14679 1199 aa10.71□□□□□ -0.69
DHFR-202ENST00000504396 MUM1L1Q5H9M0 696 aa10.71□□□□□ -0.69
DHFR-202ENST00000504396 IQSEC1Q6DN90 963 aa10.71□□□□□ -0.69
DHFR-202ENST00000504396 IFNL3Q8IZI9 196 aa10.71□□□□□ -0.69
DHFR-202ENST00000504396 GMCL1Q96IK5 515 aa10.71□□□□□ -0.69
DHFR-202ENST00000504396 USB1Q9BQ65 265 aaKnown RBP10.71□□□□□ -0.69
DHFR-202ENST00000504396 FSD1Q9BTV5 496 aa10.71□□□□□ -0.69
DHFR-202ENST00000504396 FTOQ9C0B1 505 aaKnown RBP eCLIP10.71□□□□□ -0.699e-18■■■■■ 29.4
DHFR-202ENST00000504396 VTA1Q9NP79 307 aa10.71□□□□□ -0.69
DHFR-202ENST00000504396 TRMT13Q9NUP7 481 aaKnown RBP10.71□□□□□ -0.69
DHFR-202ENST00000504396 CYP39A1Q9NYL5 469 aa10.71□□□□□ -0.69
DHFR-202ENST00000504396 MYO9BQ13459 2157 aa10.71□□□□□ -0.7
DHFR-202ENST00000504396 MUC3AQ02505 3323 aa10.7□□□□□ -0.7
DHFR-202ENST00000504396 TNKSO95271 1327 aa10.7□□□□□ -0.7
DHFR-202ENST00000504396 PTPDC1A2A3K4 754 aa10.7□□□□□ -0.7
DHFR-202ENST00000504396 RFXAPO00287 272 aa10.7□□□□□ -0.7
DHFR-202ENST00000504396 PFKMP08237 780 aa10.7□□□□□ -0.7
DHFR-202ENST00000504396 NDUFV2P19404 249 aa10.7□□□□□ -0.7
DHFR-202ENST00000504396 CPT1AP50416 773 aa10.7□□□□□ -0.7
DHFR-202ENST00000504396 TMEM63BQ5T3F8 832 aa10.7□□□□□ -0.7
DHFR-202ENST00000504396 RASGRP2Q7LDG7 609 aa10.7□□□□□ -0.7
DHFR-202ENST00000504396 OR6J1Q8NGC5 347 aa10.7□□□□□ -0.7
DHFR-202ENST00000504396 ARNTL2Q8WYA1 636 aa10.7□□□□□ -0.7
DHFR-202ENST00000504396 PURBQ96QR8 312 aaKnown RBP10.7□□□□□ -0.7
DHFR-202ENST00000504396 SEC62Q99442 399 aaKnown RBP10.7□□□□□ -0.7
DHFR-202ENST00000504396 C1QTNF1Q9BXJ1 281 aa10.7□□□□□ -0.7
DHFR-202ENST00000504396 TOMM22Q9NS69 142 aa10.7□□□□□ -0.7
DHFR-202ENST00000504396 POLR3EQ9NVU0 708 aa10.7□□□□□ -0.7
DHFR-202ENST00000504396 ADD3Q9UEY8 706 aaKnown RBP10.7□□□□□ -0.7
DHFR-202ENST00000504396 PRR12Q9ULL5 1215 aa10.7□□□□□ -0.7
DHFR-202ENST00000504396 NOD1Q9Y239 953 aa10.7□□□□□ -0.7
DHFR-202ENST00000504396 Q9Y3F1 56 aa10.7□□□□□ -0.7
DHFR-202ENST00000504396 RAD50Q92878 1312 aa10.69□□□□□ -0.7
DHFR-202ENST00000504396 SCN5AQ14524 2016 aa10.69□□□□□ -0.7
DHFR-202ENST00000504396 LOC102724159A0A0B4J2E5 919 aa10.69□□□□□ -0.7
DHFR-202ENST00000504396 RANBP6O60518 1105 aaKnown RBP10.69□□□□□ -0.7
DHFR-202ENST00000504396 NMT2O60551 498 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms