RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 SRGAP3O43295 1099 aa4.43□□□□□ -1.7
USP46-205ENST00000504078 ADAMTS4O75173 837 aa4.43□□□□□ -1.7
USP46-205ENST00000504078 IDH1O75874 414 aaKnown RBP4.43□□□□□ -1.7
USP46-205ENST00000504078 FLOT1O75955 427 aa4.43□□□□□ -1.7
USP46-205ENST00000504078 CSPG5O95196 566 aa4.43□□□□□ -1.7
USP46-205ENST00000504078 CA3P07451 260 aa4.43□□□□□ -1.7
USP46-205ENST00000504078 LDHCP07864 332 aa4.43□□□□□ -1.7
USP46-205ENST00000504078 C6orf222P0C671 652 aaPredicted RBP4.43□□□□□ -1.7
USP46-205ENST00000504078 CYP7A1P22680 504 aa4.43□□□□□ -1.7
USP46-205ENST00000504078 ARID4AP29374 1257 aaPredicted RBP4.43□□□□□ -1.7
USP46-205ENST00000504078 SHMT1P34896 483 aa4.43□□□□□ -1.7
USP46-205ENST00000504078 ZAP70P43403 619 aa4.43□□□□□ -1.7
USP46-205ENST00000504078 MRE11P49959 708 aa4.43□□□□□ -1.7
USP46-205ENST00000504078 ACLYP53396 1101 aa4.43□□□□□ -1.7
USP46-205ENST00000504078 BEX3Q00994 111 aa4.43□□□□□ -1.7
USP46-205ENST00000504078 PPIGQ13427 754 aaKnown RBP eCLIP4.43□□□□□ -1.7
USP46-205ENST00000504078 ABCB5Q2M3G0 1257 aa4.43□□□□□ -1.7
USP46-205ENST00000504078 PRSS36Q5K4E3 855 aa4.43□□□□□ -1.7
USP46-205ENST00000504078 TTC39AQ5SRH9 613 aa4.43□□□□□ -1.7
USP46-205ENST00000504078 AKNAD1Q5T1N1 836 aa4.43□□□□□ -1.7
USP46-205ENST00000504078 LBX2Q6XYB7 198 aa4.43□□□□□ -1.7
USP46-205ENST00000504078 RNF180Q86T96 592 aa4.43□□□□□ -1.7
USP46-205ENST00000504078 WDR63Q8IWG1 891 aa4.43□□□□□ -1.7
USP46-205ENST00000504078 FAM9BQ8IZU0 186 aa4.43□□□□□ -1.7
USP46-205ENST00000504078 GDPD5Q8WTR4 605 aa4.43□□□□□ -1.7
USP46-205ENST00000504078 CHMP4CQ96CF2 233 aa4.43□□□□□ -1.7
USP46-205ENST00000504078 SCLYQ96I15 445 aa4.43□□□□□ -1.7
USP46-205ENST00000504078 OCSTAMPQ9BR26 566 aa4.43□□□□□ -1.7
USP46-205ENST00000504078 C1QTNF1Q9BXJ1 281 aa4.43□□□□□ -1.7
USP46-205ENST00000504078 KIAA1683Q9H0B3 1180 aa4.43□□□□□ -1.7
USP46-205ENST00000504078 CD320Q9NPF0 282 aa4.43□□□□□ -1.7
USP46-205ENST00000504078 TPSG1Q9NRR2 321 aa4.43□□□□□ -1.7
USP46-205ENST00000504078 MSRAQ9UJ68 235 aa4.43□□□□□ -1.7
USP46-205ENST00000504078 TANC1Q9C0D5 1861 aa4.43□□□□□ -1.7
USP46-205ENST00000504078 SCN5AQ14524 2016 aa4.43□□□□□ -1.7
USP46-205ENST00000504078 CHD9Q3L8U1 2897 aa4.43□□□□□ -1.7
USP46-205ENST00000504078 TTC28Q96AY4 2481 aa4.43□□□□□ -1.7
USP46-205ENST00000504078 PTPRSQ13332 1948 aa4.42□□□□□ -1.7
USP46-205ENST00000504078 ROBO3Q96MS0 1386 aa4.42□□□□□ -1.7
USP46-205ENST00000504078 MCM3APO60318 1980 aa4.42□□□□□ -1.7
USP46-205ENST00000504078 CYP2D7A0A087X1C5 515 aa4.42□□□□□ -1.7
USP46-205ENST00000504078 PNMA6EA0A0J9YXQ4 647 aa4.42□□□□□ -1.7
USP46-205ENST00000504078 E9PSI1 815 aa4.42□□□□□ -1.7
USP46-205ENST00000504078 AP1G2O75843 785 aa4.42□□□□□ -1.7
USP46-205ENST00000504078 BAG3O95817 575 aa4.42□□□□□ -1.7
USP46-205ENST00000504078 TIMP1P01033 207 aa4.42□□□□□ -1.7
USP46-205ENST00000504078 IGHA2P01877 340 aa4.42□□□□□ -1.7
USP46-205ENST00000504078 CYP2E1P05181 493 aaPredicted RBP4.42□□□□□ -1.7
USP46-205ENST00000504078 THBS1P07996 1170 aa4.42□□□□□ -1.7
USP46-205ENST00000504078 ZNF865P0CJ78 1059 aaPredicted RBP4.42□□□□□ -1.7
USP46-205ENST00000504078 ARAFP10398 606 aa4.42□□□□□ -1.7
USP46-205ENST00000504078 AKR1A1P14550 325 aa4.42□□□□□ -1.7
USP46-205ENST00000504078 PLCD1P51178 756 aa4.42□□□□□ -1.7
USP46-205ENST00000504078 USP14P54578 494 aa4.42□□□□□ -1.7
USP46-205ENST00000504078 PSMC6P62333 389 aa4.42□□□□□ -1.7
USP46-205ENST00000504078 TMEM132BQ14DG7 1078 aa4.42□□□□□ -1.7
USP46-205ENST00000504078 RAB30Q15771 203 aa4.42□□□□□ -1.7
USP46-205ENST00000504078 KCNA10Q16322 511 aa4.42□□□□□ -1.7
USP46-205ENST00000504078 SLFNL1Q499Z3 407 aa4.42□□□□□ -1.7
USP46-205ENST00000504078 CERKLQ49MI3 558 aaPredicted RBP4.42□□□□□ -1.7
USP46-205ENST00000504078 MFSD5Q6N075 450 aa4.42□□□□□ -1.7
USP46-205ENST00000504078 PSRC1Q6PGN9 363 aaPredicted RBP4.42□□□□□ -1.7
USP46-205ENST00000504078 CYP2U1Q7Z449 544 aa4.42□□□□□ -1.7
USP46-205ENST00000504078 TMCO2Q7Z6W1 182 aaPredicted RBP4.42□□□□□ -1.7
USP46-205ENST00000504078 DEFB128Q7Z7B8 93 aa4.42□□□□□ -1.7
USP46-205ENST00000504078 RNF135Q8IUD6 432 aa4.42□□□□□ -1.7
USP46-205ENST00000504078 STK11IPQ8N1F8 1099 aa4.42□□□□□ -1.7
USP46-205ENST00000504078 MAGEB6Q8N7X4 407 aa4.42□□□□□ -1.7
USP46-205ENST00000504078 ARNTL2Q8WYA1 636 aa4.42□□□□□ -1.7
USP46-205ENST00000504078 DYNLL2Q96FJ2 89 aa4.42□□□□□ -1.7
USP46-205ENST00000504078 SNX27Q96L92 541 aa4.42□□□□□ -1.7
USP46-205ENST00000504078 NUP88Q99567 741 aaPredicted RBP4.42□□□□□ -1.7
USP46-205ENST00000504078 WNT8AQ9H1J5 351 aa4.42□□□□□ -1.7
USP46-205ENST00000504078 DHX36Q9H2U1 1008 aaKnown RBP4.42□□□□□ -1.7
USP46-205ENST00000504078 HIPK3Q9H422 1215 aa4.42□□□□□ -1.7
USP46-205ENST00000504078 C1orf115Q9H7X2 142 aa4.42□□□□□ -1.7
USP46-205ENST00000504078 SLC28A3Q9HAS3 691 aa4.42□□□□□ -1.7
USP46-205ENST00000504078 SERPINB13Q9UIV8 391 aa4.42□□□□□ -1.7
USP46-205ENST00000504078 MTUS1Q9ULD2 1270 aa4.42□□□□□ -1.7
USP46-205ENST00000504078 SYNGAP1Q96PV0 1343 aa4.42□□□□□ -1.7
USP46-205ENST00000504078 BAZ2AQ9UIF9 1905 aaKnown RBP4.41□□□□□ -1.7
USP46-205ENST00000504078 A0A0U1RQG5 324 aaPredicted RBP4.41□□□□□ -1.7
USP46-205ENST00000504078 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.41□□□□□ -1.7
USP46-205ENST00000504078 LCHNA4D1U4 455 aa4.41□□□□□ -1.7
USP46-205ENST00000504078 SPDYE3A6NKU9 549 aa4.41□□□□□ -1.7
USP46-205ENST00000504078 C2CD2LO14523 706 aa4.41□□□□□ -1.7
USP46-205ENST00000504078 PAX4O43316 350 aa4.41□□□□□ -1.7
USP46-205ENST00000504078 HYAL3O43820 417 aaPredicted RBP4.41□□□□□ -1.7
USP46-205ENST00000504078 ASGR1P07306 291 aa4.41□□□□□ -1.7
USP46-205ENST00000504078 FCER1AP12319 257 aa4.41□□□□□ -1.7
USP46-205ENST00000504078 AKR1B1P15121 316 aa4.41□□□□□ -1.7
USP46-205ENST00000504078 ICA1Q05084 483 aa4.41□□□□□ -1.7
USP46-205ENST00000504078 OS9Q13438 667 aaPredicted RBP4.41□□□□□ -1.7
USP46-205ENST00000504078 TTLL4Q14679 1199 aa4.41□□□□□ -1.7
USP46-205ENST00000504078 FAM83BQ5T0W9 1011 aa4.41□□□□□ -1.7
USP46-205ENST00000504078 TMEM63BQ5T3F8 832 aa4.41□□□□□ -1.7
USP46-205ENST00000504078 RASIP1Q5U651 963 aa4.41□□□□□ -1.7
USP46-205ENST00000504078 RNF20Q5VTR2 975 aa4.41□□□□□ -1.7
USP46-205ENST00000504078 CXCL17Q6UXB2 119 aa4.41□□□□□ -1.7
USP46-205ENST00000504078 NOL8Q76FK4 1167 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms