RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 TADA3O75528 432 aa10.68□□□□□ -0.7
PDLIM5-207ENST00000503974 USP2O75604 605 aaPredicted RBP10.68□□□□□ -0.7
PDLIM5-207ENST00000503974 SLURP2P0DP57 97 aa10.68□□□□□ -0.7
PDLIM5-207ENST00000503974 CDK8P49336 464 aa10.68□□□□□ -0.7
PDLIM5-207ENST00000503974 MCM2P49736 904 aa10.68□□□□□ -0.7
PDLIM5-207ENST00000503974 KIAA0753Q2KHM9 967 aa10.68□□□□□ -0.7
PDLIM5-207ENST00000503974 SLC4A8Q2Y0W8 1093 aa10.68□□□□□ -0.7
PDLIM5-207ENST00000503974 CEP85LQ5SZL2 805 aa10.68□□□□□ -0.7
PDLIM5-207ENST00000503974 CEP112Q8N8E3 955 aa10.68□□□□□ -0.7
PDLIM5-207ENST00000503974 KLRG1Q96E93 195 aa10.68□□□□□ -0.7
PDLIM5-207ENST00000503974 ZNF341Q9BYN7 854 aa10.68□□□□□ -0.7
PDLIM5-207ENST00000503974 BRD8Q9H0E9 1235 aa10.68□□□□□ -0.7
PDLIM5-207ENST00000503974 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.68□□□□□ -0.7
PDLIM5-207ENST00000503974 NRBP1Q9UHY1 535 aa10.68□□□□□ -0.7
PDLIM5-207ENST00000503974 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.68□□□□□ -0.7
PDLIM5-207ENST00000503974 PLIN4Q96Q06 1357 aa10.68□□□□□ -0.7
PDLIM5-207ENST00000503974 GOLGA6L10A6NI86 522 aa10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 UNCXA6NJT0 531 aa10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 EFCAB8A8MWE9 144 aa10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 EBAG9O00559 213 aa10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 TUBB4AP04350 444 aa10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 SLC3A2P08195 630 aaKnown RBP10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 HAND2P61296 217 aa10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 CTDSPL2Q05D32 466 aa10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 ADCY1Q08828 1119 aa10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 NOL9Q5SY16 702 aaKnown RBP10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 CST9Q5W186 159 aa10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 BRAPQ7Z569 592 aa10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 CCDC65Q8IXS2 484 aa10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 CRACR2BQ8N4Y2 399 aaPredicted RBP10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 ATP11CQ8NB49 1132 aa10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 SLC44A5Q8NCS7 719 aa10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.67□□□□□ -0.71e-6■■■□□ 17.2
PDLIM5-207ENST00000503974 UHMK1Q8TAS1 419 aaKnown RBP10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 SPIRE2Q8WWL2 714 aa10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 DTNBP1Q96EV8 351 aa10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 CORO1BQ9BR76 489 aa10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 RNF41Q9H4P4 317 aaPredicted RBP10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 CORO1CQ9ULV4 474 aaPredicted RBP10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 FAN1Q9Y2M0 1017 aa10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 TAF6LQ9Y6J9 622 aa10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 PHIPQ8WWQ0 1821 aa10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 FAM196BA6NMK8 535 aa10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 EIF3FO00303 357 aaPredicted RBP10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 PPP1R12BO60237 982 aaPredicted RBP10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 PPFIA3O75145 1194 aa10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 SMNDC1O75940 238 aaKnown RBP eCLIP10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 CELF2O95319 508 aaKnown RBP10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 RASA1P20936 1047 aa10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 GBP2P32456 591 aaPredicted RBP10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 PDE4BQ07343 736 aa10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 ACTN3Q08043 901 aaPredicted RBP10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 PTK7Q13308 1070 aa10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 RRP1BQ14684 758 aaKnown RBP10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 CCDC70Q6NSX1 233 aa10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 STOX1Q6ZVD7 989 aa10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 MIGA2Q7L4E1 593 aa10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 ANKRD13BQ86YJ7 626 aa10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 CCAR2Q8N163 923 aaKnown RBP10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 TRIML1Q8N9V2 468 aa10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 RSRC1Q96IZ7 334 aaKnown RBP10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 ZNF287Q9HBT7 754 aa10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 SENP2Q9HC62 589 aa10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 GBA2Q9HCG7 927 aaPredicted RBP10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 PAPOLBQ9NRJ5 636 aaKnown RBP10.67□□□□□ -0.7
PDLIM5-207ENST00000503974 SMTNP53814 917 aa10.66□□□□□ -0.7
PDLIM5-207ENST00000503974 NSUN2Q08J23 767 aaKnown RBP eCLIP10.66□□□□□ -0.7
PDLIM5-207ENST00000503974 CLPPQ16740 277 aaPredicted RBP10.66□□□□□ -0.7
PDLIM5-207ENST00000503974 LDLRAD1Q5T700 205 aa10.66□□□□□ -0.7
PDLIM5-207ENST00000503974 OLFML1Q6UWY5 402 aa10.66□□□□□ -0.7
PDLIM5-207ENST00000503974 CCDC170Q8IYT3 715 aa10.66□□□□□ -0.7
PDLIM5-207ENST00000503974 RASEFQ8IZ41 740 aa10.66□□□□□ -0.7
PDLIM5-207ENST00000503974 GPR161Q8N6U8 529 aaKnown RBP10.66□□□□□ -0.7
PDLIM5-207ENST00000503974 CCDC150Q8NCX0 1101 aa10.66□□□□□ -0.7
PDLIM5-207ENST00000503974 CCDC17Q96LX7 622 aa10.66□□□□□ -0.7
PDLIM5-207ENST00000503974 PDE11AQ9HCR9 933 aa10.66□□□□□ -0.7
PDLIM5-207ENST00000503974 GINM1Q9NU53 330 aa10.66□□□□□ -0.7
PDLIM5-207ENST00000503974 NEDD4P46934 1319 aa10.66□□□□□ -0.7
PDLIM5-207ENST00000503974 E7EWF7 191 aa10.65□□□□□ -0.7
PDLIM5-207ENST00000503974 CTNND1O60716 968 aaKnown RBP10.65□□□□□ -0.7
PDLIM5-207ENST00000503974 RASSF9O75901 435 aa10.65□□□□□ -0.7
PDLIM5-207ENST00000503974 CAP2P40123 477 aa10.65□□□□□ -0.7
PDLIM5-207ENST00000503974 IREB2P48200 963 aaKnown RBP10.65□□□□□ -0.7
PDLIM5-207ENST00000503974 ZFYVE27Q5T4F4 411 aa10.65□□□□□ -0.7
PDLIM5-207ENST00000503974 CCDC50Q8IVM0 306 aa10.65□□□□□ -0.7
PDLIM5-207ENST00000503974 TRIM58Q8NG06 486 aa10.65□□□□□ -0.7
PDLIM5-207ENST00000503974 FZD1Q9UP38 647 aa10.65□□□□□ -0.7
PDLIM5-207ENST00000503974 GADD45BO75293 160 aaPredicted RBP10.65□□□□□ -0.7
PDLIM5-207ENST00000503974 ABL1P00519 1130 aa10.65□□□□□ -0.7
PDLIM5-207ENST00000503974 MYCLP1P12525 358 aaPredicted RBP10.65□□□□□ -0.7
PDLIM5-207ENST00000503974 KCNA2P16389 499 aa10.65□□□□□ -0.7
PDLIM5-207ENST00000503974 SMARCA1P28370 1054 aa10.65□□□□□ -0.7
PDLIM5-207ENST00000503974 HDAC4P56524 1084 aa10.65□□□□□ -0.7
PDLIM5-207ENST00000503974 BTG3Q14201 252 aaPredicted RBP10.65□□□□□ -0.7
PDLIM5-207ENST00000503974 LONRF2Q1L5Z9 754 aa10.65□□□□□ -0.7
PDLIM5-207ENST00000503974 CCDC92Q53HC0 331 aaPredicted RBP10.65□□□□□ -0.7
PDLIM5-207ENST00000503974 PACS1Q6VY07 963 aa10.65□□□□□ -0.7
PDLIM5-207ENST00000503974 MFSD6Q6ZSS7 791 aa10.65□□□□□ -0.7
PDLIM5-207ENST00000503974 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.65□□□□□ -0.7
PDLIM5-207ENST00000503974 OTUD6AQ7L8S5 288 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms