RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 IL31RAQ8NI17 732 aa12.73□□□□□ -0.37
VCAN-205ENST00000503923 PGBD1Q96JS3 809 aa12.73□□□□□ -0.37
VCAN-205ENST00000503923 PDGFCQ9NRA1 345 aa12.73□□□□□ -0.37
VCAN-205ENST00000503923 KIAA1217Q5T5P2 1943 aa12.72□□□□□ -0.37
VCAN-205ENST00000503923 POTEFA5A3E0 1075 aa12.72□□□□□ -0.37
VCAN-205ENST00000503923 ADAMTS3O15072 1205 aa12.72□□□□□ -0.37
VCAN-205ENST00000503923 DUSP11O75319 330 aaKnown RBP12.72□□□□□ -0.37
VCAN-205ENST00000503923 TFRCP02786 760 aaKnown RBP12.72□□□□□ -0.37
VCAN-205ENST00000503923 SREBF1P36956 1147 aa12.72□□□□□ -0.37
VCAN-205ENST00000503923 ADCYAP1R1P41586 468 aa12.72□□□□□ -0.37
VCAN-205ENST00000503923 MRPS9P82933 396 aaKnown RBP12.72□□□□□ -0.37
VCAN-205ENST00000503923 TNFAIP2Q03169 654 aa12.72□□□□□ -0.37
VCAN-205ENST00000503923 TTLL4Q14679 1199 aa12.72□□□□□ -0.37
VCAN-205ENST00000503923 NPY5RQ15761 445 aa12.72□□□□□ -0.37
VCAN-205ENST00000503923 GNPTABQ3T906 1256 aa12.72□□□□□ -0.37
VCAN-205ENST00000503923 SEPT14Q6ZU15 432 aa12.72□□□□□ -0.37
VCAN-205ENST00000503923 RASGRP4Q8TDF6 673 aa12.72□□□□□ -0.37
VCAN-205ENST00000503923 SCFD2Q8WU76 684 aa12.72□□□□□ -0.37
VCAN-205ENST00000503923 C8orf76Q96K31 380 aa12.72□□□□□ -0.37
VCAN-205ENST00000503923 CRISPLD2Q9H0B8 497 aa12.72□□□□□ -0.37
VCAN-205ENST00000503923 BRMS1Q9HCU9 246 aa12.72□□□□□ -0.37
VCAN-205ENST00000503923 GJB4Q9NTQ9 266 aa12.72□□□□□ -0.37
VCAN-205ENST00000503923 OGDHLQ9ULD0 1010 aa12.72□□□□□ -0.37
VCAN-205ENST00000503923 SMC3Q9UQE7 1217 aa12.72□□□□□ -0.37
VCAN-205ENST00000503923 FRMPD3Q5JV73 1810 aa12.72□□□□□ -0.37
VCAN-205ENST00000503923 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.71□□□□□ -0.37
VCAN-205ENST00000503923 M0R2N6 131 aa12.71□□□□□ -0.37
VCAN-205ENST00000503923 NKRFO15226 690 aaKnown RBP eCLIP12.71□□□□□ -0.37
VCAN-205ENST00000503923 MMP1P03956 469 aa12.71□□□□□ -0.37
VCAN-205ENST00000503923 SMPD1P17405 629 aa12.71□□□□□ -0.37
VCAN-205ENST00000503923 KRT2P35908 639 aa12.71□□□□□ -0.37
VCAN-205ENST00000503923 FOSBP53539 338 aa12.71□□□□□ -0.37
VCAN-205ENST00000503923 SOX10P56693 466 aa12.71□□□□□ -0.37
VCAN-205ENST00000503923 DUSP28Q4G0W2 176 aa12.71□□□□□ -0.37
VCAN-205ENST00000503923 ANO1Q5XXA6 986 aa12.71□□□□□ -0.37
VCAN-205ENST00000503923 KRT40Q6A162 431 aa12.71□□□□□ -0.37
VCAN-205ENST00000503923 KCNV1Q6PIU1 500 aa12.71□□□□□ -0.37
VCAN-205ENST00000503923 WDR11Q9BZH6 1224 aa12.71□□□□□ -0.37
VCAN-205ENST00000503923 XPNPEP3Q9NQH7 507 aa12.71□□□□□ -0.37
VCAN-205ENST00000503923 Q9Y3F1 56 aa12.71□□□□□ -0.37
VCAN-205ENST00000503923 MRVI1Q9Y6F6 885 aa12.71□□□□□ -0.37
VCAN-205ENST00000503923 ADCY6O43306 1168 aa12.7□□□□□ -0.38
VCAN-205ENST00000503923 RGS20O76081 388 aa12.7□□□□□ -0.38
VCAN-205ENST00000503923 CYP3A4P08684 503 aa12.7□□□□□ -0.38
VCAN-205ENST00000503923 TXNP10599 105 aaKnown RBP12.7□□□□□ -0.38
VCAN-205ENST00000503923 TGFB3P10600 412 aa12.7□□□□□ -0.38
VCAN-205ENST00000503923 EN2P19622 333 aaPredicted RBP12.7□□□□□ -0.38
VCAN-205ENST00000503923 GJB2P29033 226 aa12.7□□□□□ -0.38
VCAN-205ENST00000503923 ICAM3P32942 547 aa12.7□□□□□ -0.38
VCAN-205ENST00000503923 ARHGAP4P98171 946 aa12.7□□□□□ -0.38
VCAN-205ENST00000503923 SAFBQ15424 915 aaKnown RBP eCLIP12.7□□□□□ -0.38
VCAN-205ENST00000503923 KRT25Q7Z3Z0 450 aa12.7□□□□□ -0.38
VCAN-205ENST00000503923 NLRX1Q86UT6 975 aa12.7□□□□□ -0.38
VCAN-205ENST00000503923 ANKLE1Q8NAG6 615 aa12.7□□□□□ -0.38
VCAN-205ENST00000503923 ARRDC4Q8NCT1 418 aa12.7□□□□□ -0.38
VCAN-205ENST00000503923 FBXO18Q8NFZ0 1043 aa12.7□□□□□ -0.38
VCAN-205ENST00000503923 LENG1Q96BZ8 264 aaPredicted RBP12.7□□□□□ -0.38
VCAN-205ENST00000503923 INTS4Q96HW7 963 aaKnown RBP12.7□□□□□ -0.38
VCAN-205ENST00000503923 ZFP91Q96JP5 570 aaPredicted RBP12.7□□□□□ -0.38
VCAN-205ENST00000503923 INPP4AQ96PE3 977 aaPredicted RBP12.7□□□□□ -0.38
VCAN-205ENST00000503923 SPC25Q9HBM1 224 aa12.7□□□□□ -0.38
VCAN-205ENST00000503923 RTEL1Q9NZ71 1219 aa12.7□□□□□ -0.38
VCAN-205ENST00000503923 GNEQ9Y223 722 aaKnown RBP12.7□□□□□ -0.38
VCAN-205ENST00000503923 BRCA2P51587 3418 aa12.69□□□□□ -0.38
VCAN-205ENST00000503923 SYNRGQ9UMZ2 1314 aa12.69□□□□□ -0.38
VCAN-205ENST00000503923 MYH7BA7E2Y1 1941 aa12.69□□□□□ -0.38
VCAN-205ENST00000503923 CCDC194A0A1B0GVG4 234 aa12.69□□□□□ -0.38
VCAN-205ENST00000503923 FIBPO43427 364 aa12.69□□□□□ -0.38
VCAN-205ENST00000503923 ARIH2O95376 493 aa12.69□□□□□ -0.38
VCAN-205ENST00000503923 ZNF76P36508 570 aa12.69□□□□□ -0.38
VCAN-205ENST00000503923 GJA9P57773 515 aa12.69□□□□□ -0.38
VCAN-205ENST00000503923 NONOQ15233 471 aaKnown RBP eCLIP12.69□□□□□ -0.38
VCAN-205ENST00000503923 CCDC62Q6P9F0 684 aa12.69□□□□□ -0.38
VCAN-205ENST00000503923 RNF180Q86T96 592 aa12.69□□□□□ -0.38
VCAN-205ENST00000503923 TLK2Q86UE8 772 aa12.69□□□□□ -0.38
VCAN-205ENST00000503923 DIS3L2Q8IYB7 885 aaKnown RBP12.69□□□□□ -0.38
VCAN-205ENST00000503923 OXER1Q8TDS5 423 aa12.69□□□□□ -0.38
VCAN-205ENST00000503923 CRYGNQ8WXF5 182 aa12.69□□□□□ -0.38
VCAN-205ENST00000503923 GPRASP2Q96D09 838 aa12.69□□□□□ -0.38
VCAN-205ENST00000503923 CDHR1Q96JP9 859 aa12.69□□□□□ -0.38
VCAN-205ENST00000503923 MXRA8Q9BRK3 442 aa12.69□□□□□ -0.38
VCAN-205ENST00000503923 AP5M1Q9H0R1 490 aa12.69□□□□□ -0.38
VCAN-205ENST00000503923 UPF3AQ9H1J1 476 aaKnown RBP12.69□□□□□ -0.38
VCAN-205ENST00000503923 JADE2Q9NQC1 790 aa12.69□□□□□ -0.38
VCAN-205ENST00000503923 DDX41Q9UJV9 622 aaKnown RBP12.69□□□□□ -0.38
VCAN-205ENST00000503923 UBIAD1Q9Y5Z9 338 aa12.69□□□□□ -0.38
VCAN-205ENST00000503923 BTBD18B2RXH4 712 aa12.68□□□□□ -0.38
VCAN-205ENST00000503923 SPATA31C2B4DYI2 1134 aa12.68□□□□□ -0.38
VCAN-205ENST00000503923 DNM1LO00429 736 aa12.68□□□□□ -0.38
VCAN-205ENST00000503923 MAFGO15525 162 aa12.68□□□□□ -0.38
VCAN-205ENST00000503923 DYNC1LI2O43237 492 aaPredicted RBP12.68□□□□□ -0.38
VCAN-205ENST00000503923 ADAMTS4O75173 837 aa12.68□□□□□ -0.38
VCAN-205ENST00000503923 PGK1P00558 417 aa12.68□□□□□ -0.38
VCAN-205ENST00000503923 ITGB5P18084 799 aa12.68□□□□□ -0.38
VCAN-205ENST00000503923 USP11P51784 963 aa12.68□□□□□ -0.38
VCAN-205ENST00000503923 GUCY1B3Q02153 619 aa12.68□□□□□ -0.38
VCAN-205ENST00000503923 MTMR1Q13613 665 aa12.68□□□□□ -0.38
VCAN-205ENST00000503923 LRRC41Q15345 812 aa12.68□□□□□ -0.38
VCAN-205ENST00000503923 LY6KQ17RY6 165 aa12.68□□□□□ -0.38
VCAN-205ENST00000503923 CEP55Q53EZ4 464 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms