RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 CREB3L3Q68CJ9 461 aa22.52■■□□□ 1.2
UBE2D3-215ENST00000503418 FCHSD1Q86WN1 690 aa22.52■■□□□ 1.2
UBE2D3-215ENST00000503418 SAMD3Q8N6K7 520 aa22.52■■□□□ 1.2
UBE2D3-215ENST00000503418 CDX2Q99626 313 aaPredicted RBP22.52■■□□□ 1.2
UBE2D3-215ENST00000503418 WNT8AQ9H1J5 351 aa22.52■■□□□ 1.2
UBE2D3-215ENST00000503418 CCDC69A6NI79 296 aa22.51■■□□□ 1.19
UBE2D3-215ENST00000503418 DNAJB2P25686 324 aa22.51■■□□□ 1.19
UBE2D3-215ENST00000503418 KIF5BP33176 963 aa22.51■■□□□ 1.19
UBE2D3-215ENST00000503418 BMP2KLQ5H9B9 411 aa22.51■■□□□ 1.19
UBE2D3-215ENST00000503418 NFRKBQ6P4R8 1299 aa22.51■■□□□ 1.19
UBE2D3-215ENST00000503418 SCLYQ96I15 445 aa22.51■■□□□ 1.19
UBE2D3-215ENST00000503418 DDX41Q9UJV9 622 aaKnown RBP22.51■■□□□ 1.19
UBE2D3-215ENST00000503418 SH2B2O14492 632 aaPredicted RBP22.5■■□□□ 1.19
UBE2D3-215ENST00000503418 FGBP02675 491 aa22.5■■□□□ 1.19
UBE2D3-215ENST00000503418 PGM5Q15124 567 aa22.5■■□□□ 1.19
UBE2D3-215ENST00000503418 IL31RAQ8NI17 732 aa22.5■■□□□ 1.19
UBE2D3-215ENST00000503418 TMEM87BQ96K49 555 aa22.5■■□□□ 1.19
UBE2D3-215ENST00000503418 MTA3Q9BTC8 594 aa22.5■■□□□ 1.19
UBE2D3-215ENST00000503418 MTIF3Q9H2K0 278 aaKnown RBP22.5■■□□□ 1.19
UBE2D3-215ENST00000503418 TMEM265A0A087WTH1 108 aa22.49■■□□□ 1.19
UBE2D3-215ENST00000503418 CCND2P30279 289 aa22.49■■□□□ 1.19
UBE2D3-215ENST00000503418 COL9A3Q14050 684 aaPredicted RBP22.49■■□□□ 1.19
UBE2D3-215ENST00000503418 NECTIN1Q15223 517 aa22.49■■□□□ 1.19
UBE2D3-215ENST00000503418 RASIP1Q5U651 963 aa22.49■■□□□ 1.19
UBE2D3-215ENST00000503418 OTOP2Q7RTS6 562 aa22.49■■□□□ 1.19
UBE2D3-215ENST00000503418 HERVK_113Q902F9 699 aa22.49■■□□□ 1.19
UBE2D3-215ENST00000503418 RRP36Q96EU6 259 aaKnown RBP22.49■■□□□ 1.19
UBE2D3-215ENST00000503418 MAP3K14Q99558 947 aa22.49■■□□□ 1.19
UBE2D3-215ENST00000503418 NOD1Q9Y239 953 aa22.49■■□□□ 1.19
UBE2D3-215ENST00000503418 SCN5AQ14524 2016 aa22.48■■□□□ 1.19
UBE2D3-215ENST00000503418 GRXCR1A8MXD5 290 aa22.48■■□□□ 1.19
UBE2D3-215ENST00000503418 SORBS3O60504 671 aa22.48■■□□□ 1.19
UBE2D3-215ENST00000503418 RXRAP19793 462 aa22.48■■□□□ 1.19
UBE2D3-215ENST00000503418 CASTP20810 708 aaKnown RBP22.48■■□□□ 1.19
UBE2D3-215ENST00000503418 PTPN11Q06124 597 aaPredicted RBP22.48■■□□□ 1.19
UBE2D3-215ENST00000503418 DGKDQ16760 1214 aa22.48■■□□□ 1.19
UBE2D3-215ENST00000503418 DHX37Q8IY37 1157 aaKnown RBP22.48■■□□□ 1.19
UBE2D3-215ENST00000503418 RPUSD2Q8IZ73 545 aaKnown RBP22.48■■□□□ 1.19
UBE2D3-215ENST00000503418 TMTC2Q8N394 836 aa22.48■■□□□ 1.19
UBE2D3-215ENST00000503418 MYLIPQ8WY64 445 aa22.48■■□□□ 1.19
UBE2D3-215ENST00000503418 TIFAQ96CG3 184 aa22.48■■□□□ 1.19
UBE2D3-215ENST00000503418 ZFP91Q96JP5 570 aaPredicted RBP22.48■■□□□ 1.19
UBE2D3-215ENST00000503418 SPZ1Q9BXG8 430 aa22.48■■□□□ 1.19
UBE2D3-215ENST00000503418 LRRC2Q9BYS8 371 aa22.48■■□□□ 1.19
UBE2D3-215ENST00000503418 CXXC1Q9P0U4 656 aaPredicted RBP22.48■■□□□ 1.19
UBE2D3-215ENST00000503418 SEC63Q9UGP8 760 aaKnown RBP22.48■■□□□ 1.19
UBE2D3-215ENST00000503418 RGS20O76081 388 aa22.47■■□□□ 1.19
UBE2D3-215ENST00000503418 LAMC2Q13753 1193 aa22.47■■□□□ 1.19
UBE2D3-215ENST00000503418 VSIG10LQ86VR7 867 aa22.47■■□□□ 1.19
UBE2D3-215ENST00000503418 RAB11FIP4Q86YS3 637 aa22.47■■□□□ 1.19
UBE2D3-215ENST00000503418 GBF1Q92538 1859 aa22.46■■□□□ 1.19
UBE2D3-215ENST00000503418 TANC1Q9C0D5 1861 aa22.46■■□□□ 1.19
UBE2D3-215ENST00000503418 PLEKHA8P1O95397 391 aa22.46■■□□□ 1.19
UBE2D3-215ENST00000503418 PBX2P40425 430 aa22.46■■□□□ 1.19
UBE2D3-215ENST00000503418 GNAQP50148 359 aa22.46■■□□□ 1.19
UBE2D3-215ENST00000503418 RNF20Q5VTR2 975 aa22.46■■□□□ 1.19
UBE2D3-215ENST00000503418 KCNV1Q6PIU1 500 aa22.46■■□□□ 1.19
UBE2D3-215ENST00000503418 DEFB128Q7Z7B8 93 aa22.46■■□□□ 1.19
UBE2D3-215ENST00000503418 CMTR1Q8N1G2 835 aaKnown RBP22.46■■□□□ 1.19
UBE2D3-215ENST00000503418 PPTC7Q8NI37 304 aa22.46■■□□□ 1.19
UBE2D3-215ENST00000503418 KAT2BQ92831 832 aa22.46■■□□□ 1.19
UBE2D3-215ENST00000503418 EMID1Q96A84 441 aaPredicted RBP22.46■■□□□ 1.19
UBE2D3-215ENST00000503418 LZTS2Q9BRK4 669 aa22.46■■□□□ 1.19
UBE2D3-215ENST00000503418 PBX4Q9BYU1 374 aa22.46■■□□□ 1.19
UBE2D3-215ENST00000503418 TRIP12Q14669 1992 aaPredicted RBP22.45■■□□□ 1.18
UBE2D3-215ENST00000503418 ZBBXA8MT70 800 aa22.45■■□□□ 1.18
UBE2D3-215ENST00000503418 ZNF286BP0CG31 522 aa22.45■■□□□ 1.18
UBE2D3-215ENST00000503418 CALM1P0DP23 149 aa22.45■■□□□ 1.18
UBE2D3-215ENST00000503418 CALM2P0DP24 149 aa22.45■■□□□ 1.18
UBE2D3-215ENST00000503418 CALM3P0DP25 149 aa22.45■■□□□ 1.18
UBE2D3-215ENST00000503418 LIFRP42702 1097 aa22.45■■□□□ 1.18
UBE2D3-215ENST00000503418 PTGISQ16647 500 aa22.45■■□□□ 1.18
UBE2D3-215ENST00000503418 SRBD1Q8N5C6 995 aaKnown RBP22.45■■□□□ 1.18
UBE2D3-215ENST00000503418 RETREG2Q8NC44 543 aa22.45■■□□□ 1.18
UBE2D3-215ENST00000503418 SMARCC2Q8TAQ2 1214 aa22.45■■□□□ 1.18
UBE2D3-215ENST00000503418 CUL5Q93034 780 aa22.45■■□□□ 1.18
UBE2D3-215ENST00000503418 ZNF576Q9H609 170 aa22.45■■□□□ 1.18
UBE2D3-215ENST00000503418 SLC12A7Q9Y666 1083 aa22.45■■□□□ 1.18
UBE2D3-215ENST00000503418 GGPS1O95749 300 aa22.44■■□□□ 1.18
UBE2D3-215ENST00000503418 FOSL2P15408 326 aa22.44■■□□□ 1.18
UBE2D3-215ENST00000503418 SMARCA1P28370 1054 aa22.44■■□□□ 1.18
UBE2D3-215ENST00000503418 BFSP2Q13515 415 aa22.44■■□□□ 1.18
UBE2D3-215ENST00000503418 CELF3Q5SZQ8 465 aaKnown RBP22.44■■□□□ 1.18
UBE2D3-215ENST00000503418 GPKOWQ92917 476 aaPredicted RBP eCLIP22.44■■□□□ 1.18
UBE2D3-215ENST00000503418 SPATA33Q96N06 139 aa22.44■■□□□ 1.18
UBE2D3-215ENST00000503418 ALG1Q9BT22 464 aa22.44■■□□□ 1.18
UBE2D3-215ENST00000503418 KATNAL1Q9BW62 490 aa22.44■■□□□ 1.18
UBE2D3-215ENST00000503418 CDH23Q9H251 3354 aa22.43■■□□□ 1.18
UBE2D3-215ENST00000503418 PITPNM1O00562 1244 aa22.43■■□□□ 1.18
UBE2D3-215ENST00000503418 CDC45O75419 566 aa22.43■■□□□ 1.18
UBE2D3-215ENST00000503418 PFKMP08237 780 aa22.43■■□□□ 1.18
UBE2D3-215ENST00000503418 UBA1P22314 1058 aaKnown RBP22.43■■□□□ 1.18
UBE2D3-215ENST00000503418 PSEN2P49810 448 aa22.43■■□□□ 1.18
UBE2D3-215ENST00000503418 MFSD10Q14728 455 aa22.43■■□□□ 1.18
UBE2D3-215ENST00000503418 GRIN2CQ14957 1233 aa22.43■■□□□ 1.18
UBE2D3-215ENST00000503418 MYSM1Q5VVJ2 828 aa22.43■■□□□ 1.18
UBE2D3-215ENST00000503418 GDF6Q6KF10 455 aaPredicted RBP22.43■■□□□ 1.18
UBE2D3-215ENST00000503418 MICU3Q86XE3 530 aa22.43■■□□□ 1.18
UBE2D3-215ENST00000503418 C7orf31Q8N865 590 aa22.43■■□□□ 1.18
UBE2D3-215ENST00000503418 VWCEQ96DN2 955 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 155.7 ms