RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 IRX5P78411 483 aaPredicted RBP20.93■□□□□ 0.94
PDLIM7-209ENST00000503346 SSRP1Q08945 709 aaKnown RBP20.93■□□□□ 0.94
PDLIM7-209ENST00000503346 UBE2SQ16763 222 aa20.93■□□□□ 0.94
PDLIM7-209ENST00000503346 XRRA1Q6P2D8 792 aa20.93■□□□□ 0.94
PDLIM7-209ENST00000503346 SEPT14Q6ZU15 432 aa20.93■□□□□ 0.94
PDLIM7-209ENST00000503346 PCSK9Q8NBP7 692 aaKnown RBP20.93■□□□□ 0.94
PDLIM7-209ENST00000503346 CCDC12Q8WUD4 166 aaPredicted RBP20.93■□□□□ 0.94
PDLIM7-209ENST00000503346 STAM2O75886 525 aa20.92■□□□□ 0.94
PDLIM7-209ENST00000503346 CDKL5O76039 1030 aa20.92■□□□□ 0.94
PDLIM7-209ENST00000503346 ARIH2O95376 493 aa20.92■□□□□ 0.94
PDLIM7-209ENST00000503346 TXNP10599 105 aaKnown RBP20.92■□□□□ 0.94
PDLIM7-209ENST00000503346 ACLYP53396 1101 aa20.92■□□□□ 0.94
PDLIM7-209ENST00000503346 KCNA10Q16322 511 aa20.92■□□□□ 0.94
PDLIM7-209ENST00000503346 ME3Q16798 604 aa20.92■□□□□ 0.94
PDLIM7-209ENST00000503346 GNASQ5JWF2 1037 aa20.92■□□□□ 0.94
PDLIM7-209ENST00000503346 DPF3Q92784 378 aa20.92■□□□□ 0.94
PDLIM7-209ENST00000503346 ZMYND12Q9H0C1 365 aa20.92■□□□□ 0.94
PDLIM7-209ENST00000503346 PCDHA6Q9UN73 950 aa20.92■□□□□ 0.94
PDLIM7-209ENST00000503346 PCDHA8Q9Y5H6 950 aa20.92■□□□□ 0.94
PDLIM7-209ENST00000503346 SPDYE3A6NKU9 549 aa20.91■□□□□ 0.94
PDLIM7-209ENST00000503346 DEXIO95424 95 aa20.91■□□□□ 0.94
PDLIM7-209ENST00000503346 CLK2P49760 499 aaKnown RBP20.91■□□□□ 0.94
PDLIM7-209ENST00000503346 MRPS9P82933 396 aaKnown RBP20.91■□□□□ 0.94
PDLIM7-209ENST00000503346 FSCN1Q16658 493 aaKnown RBP20.91■□□□□ 0.94
PDLIM7-209ENST00000503346 PCNX4Q63HM2 1172 aa20.91■□□□□ 0.94
PDLIM7-209ENST00000503346 GTF3C6Q969F1 213 aa20.91■□□□□ 0.94
PDLIM7-209ENST00000503346 SH3GLB2Q9NR46 395 aa20.91■□□□□ 0.94
PDLIM7-209ENST00000503346 DDX41Q9UJV9 622 aaKnown RBP20.91■□□□□ 0.94
PDLIM7-209ENST00000503346 A0A1W2PQ45 241 aaPredicted RBP20.9■□□□□ 0.94
PDLIM7-209ENST00000503346 A0A1W2PQY0 241 aa20.9■□□□□ 0.94
PDLIM7-209ENST00000503346 LARGE1O95461 756 aa20.9■□□□□ 0.94
PDLIM7-209ENST00000503346 FOSP01100 380 aaPredicted RBP20.9■□□□□ 0.94
PDLIM7-209ENST00000503346 BEX3Q00994 111 aa20.9■□□□□ 0.94
PDLIM7-209ENST00000503346 AP3B2Q13367 1082 aa20.9■□□□□ 0.94
PDLIM7-209ENST00000503346 SNX17Q15036 470 aa20.9■□□□□ 0.94
PDLIM7-209ENST00000503346 LRRC26Q2I0M4 334 aa20.9■□□□□ 0.94
PDLIM7-209ENST00000503346 KCNV1Q6PIU1 500 aa20.9■□□□□ 0.94
PDLIM7-209ENST00000503346 CCDC148Q8NFR7 591 aa20.9■□□□□ 0.94
PDLIM7-209ENST00000503346 OR6J1Q8NGC5 347 aa20.9■□□□□ 0.94
PDLIM7-209ENST00000503346 FERMT2Q96AC1 680 aa20.9■□□□□ 0.94
PDLIM7-209ENST00000503346 TBC1D32Q96NH3 1257 aa20.9■□□□□ 0.94
PDLIM7-209ENST00000503346 INPP4AQ96PE3 977 aaPredicted RBP20.9■□□□□ 0.94
PDLIM7-209ENST00000503346 EHMT1Q9H9B1 1298 aa20.9■□□□□ 0.94
PDLIM7-209ENST00000503346 MRVI1Q9Y6F6 885 aa20.9■□□□□ 0.94
PDLIM7-209ENST00000503346 STK36Q9NRP7 1315 aa20.89■□□□□ 0.93
PDLIM7-209ENST00000503346 ZEB2O60315 1214 aa20.89■□□□□ 0.93
PDLIM7-209ENST00000503346 ASGR1P07306 291 aa20.89■□□□□ 0.93
PDLIM7-209ENST00000503346 TGFB3P10600 412 aa20.89■□□□□ 0.93
PDLIM7-209ENST00000503346 GNA11P29992 359 aa20.89■□□□□ 0.93
PDLIM7-209ENST00000503346 RABEP1Q15276 862 aa20.89■□□□□ 0.93
PDLIM7-209ENST00000503346 LY6KQ17RY6 165 aa20.89■□□□□ 0.93
PDLIM7-209ENST00000503346 C1orf53Q5VUE5 145 aa20.89■□□□□ 0.93
PDLIM7-209ENST00000503346 SLC39A5Q6ZMH5 540 aa20.89■□□□□ 0.93
PDLIM7-209ENST00000503346 FAM177A1Q8N128 213 aaPredicted RBP20.89■□□□□ 0.93
PDLIM7-209ENST00000503346 NECAB1Q8N987 351 aa20.89■□□□□ 0.93
PDLIM7-209ENST00000503346 IL27Q8NEV9 243 aa20.89■□□□□ 0.93
PDLIM7-209ENST00000503346 COPS5Q92905 334 aa20.89■□□□□ 0.93
PDLIM7-209ENST00000503346 BACH2Q9BYV9 841 aa20.89■□□□□ 0.93
PDLIM7-209ENST00000503346 C6orf50Q9HD87 102 aa20.89■□□□□ 0.93
PDLIM7-209ENST00000503346 VPS54Q9P1Q0 977 aa20.89■□□□□ 0.93
PDLIM7-209ENST00000503346 LIMCH1Q9UPQ0 1083 aa20.89■□□□□ 0.93
PDLIM7-209ENST00000503346 EVI5O60447 810 aa20.88■□□□□ 0.93
PDLIM7-209ENST00000503346 CTDNEP1O95476 244 aa20.88■□□□□ 0.93
PDLIM7-209ENST00000503346 ICAM3P32942 547 aa20.88■□□□□ 0.93
PDLIM7-209ENST00000503346 CPT1AP50416 773 aa20.88■□□□□ 0.93
PDLIM7-209ENST00000503346 ATN1P54259 1190 aaPredicted RBP20.88■□□□□ 0.93
PDLIM7-209ENST00000503346 GNPTABQ3T906 1256 aa20.88■□□□□ 0.93
PDLIM7-209ENST00000503346 ZFP91Q96JP5 570 aaPredicted RBP20.88■□□□□ 0.93
PDLIM7-209ENST00000503346 ELP1O95163 1332 aa20.87■□□□□ 0.93
PDLIM7-209ENST00000503346 A6NJR5 290 aa20.87■□□□□ 0.93
PDLIM7-209ENST00000503346 GH1P01241 217 aa20.87■□□□□ 0.93
PDLIM7-209ENST00000503346 ARHGAP1Q07960 439 aa20.87■□□□□ 0.93
PDLIM7-209ENST00000503346 MCTP2Q6DN12 878 aa20.87■□□□□ 0.93
PDLIM7-209ENST00000503346 BICD2Q8TD16 824 aa20.87■□□□□ 0.93
PDLIM7-209ENST00000503346 EMID1Q96A84 441 aaPredicted RBP20.87■□□□□ 0.93
PDLIM7-209ENST00000503346 GLT1D1Q96MS3 346 aa20.87■□□□□ 0.93
PDLIM7-209ENST00000503346 ANO3Q9BYT9 981 aa20.87■□□□□ 0.93
PDLIM7-209ENST00000503346 STARD7Q9NQZ5 370 aa20.87■□□□□ 0.93
PDLIM7-209ENST00000503346 TMEM260Q9NX78 707 aa20.87■□□□□ 0.93
PDLIM7-209ENST00000503346 RTEL1Q9NZ71 1219 aa20.87■□□□□ 0.93
PDLIM7-209ENST00000503346 NR2E3Q9Y5X4 410 aa20.87■□□□□ 0.93
PDLIM7-209ENST00000503346 SPATA31C2B4DYI2 1134 aa20.86■□□□□ 0.93
PDLIM7-209ENST00000503346 FIBPO43427 364 aa20.86■□□□□ 0.93
PDLIM7-209ENST00000503346 CABYRO75952 493 aa20.86■□□□□ 0.93
PDLIM7-209ENST00000503346 BRDTQ58F21 947 aaPredicted RBP20.86■□□□□ 0.93
PDLIM7-209ENST00000503346 NLRX1Q86UT6 975 aa20.86■□□□□ 0.93
PDLIM7-209ENST00000503346 REXO1Q8N1G1 1221 aaKnown RBP20.86■□□□□ 0.93
PDLIM7-209ENST00000503346 ADAMTS3O15072 1205 aa20.85■□□□□ 0.93
PDLIM7-209ENST00000503346 UBA1P22314 1058 aaKnown RBP20.85■□□□□ 0.93
PDLIM7-209ENST00000503346 SREBF1P36956 1147 aa20.85■□□□□ 0.93
PDLIM7-209ENST00000503346 RTP1P59025 263 aa20.85■□□□□ 0.93
PDLIM7-209ENST00000503346 NLRP5P59047 1200 aa20.85■□□□□ 0.93
PDLIM7-209ENST00000503346 SP2Q02086 613 aa20.85■□□□□ 0.93
PDLIM7-209ENST00000503346 ST3GAL1Q11201 340 aa20.85■□□□□ 0.93
PDLIM7-209ENST00000503346 SEMA3FQ13275 785 aa20.85■□□□□ 0.93
PDLIM7-209ENST00000503346 LAMC2Q13753 1193 aa20.85■□□□□ 0.93
PDLIM7-209ENST00000503346 PRPF38BQ5VTL8 546 aaKnown RBP20.85■□□□□ 0.93
PDLIM7-209ENST00000503346 JAKMIP3Q5VZ66 844 aa20.85■□□□□ 0.93
PDLIM7-209ENST00000503346 CXCL17Q6UXB2 119 aa20.85■□□□□ 0.93
PDLIM7-209ENST00000503346 C7orf61Q8IZ16 206 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 222.8 ms