RNA–Protein interactions for RNA: ENST00000503080.1

UBE2B-203, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 2

Gene UBE2B, Length 657 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-203ENST00000503080 SGSM3Q96HU1 749 aa6.56□□□□□ -1.36
UBE2B-203ENST00000503080 CHAMP1Q96JM3 812 aa6.56□□□□□ -1.36
UBE2B-203ENST00000503080 KCNC2Q96PR1 638 aa6.56□□□□□ -1.36
UBE2B-203ENST00000503080 FBXL7Q9UJT9 491 aa6.56□□□□□ -1.36
UBE2B-203ENST00000503080 PMF1-BGLAPU3KQ54 211 aa6.56□□□□□ -1.36
UBE2B-203ENST00000503080 X6R8D5 127 aa6.56□□□□□ -1.36
UBE2B-203ENST00000503080 IQCA1LA6NCM1 817 aa6.55□□□□□ -1.36
UBE2B-203ENST00000503080 FFAR3O14843 346 aa6.55□□□□□ -1.36
UBE2B-203ENST00000503080 U2SURPO15042 1029 aaKnown RBP6.55□□□□□ -1.36
UBE2B-203ENST00000503080 DLX3O60479 287 aa6.55□□□□□ -1.36
UBE2B-203ENST00000503080 CACNB2Q08289 660 aaPredicted RBP6.55□□□□□ -1.36
UBE2B-203ENST00000503080 LSAMPQ13449 338 aa6.55□□□□□ -1.36
UBE2B-203ENST00000503080 RIOX2Q8IUF8 465 aa6.55□□□□□ -1.36
UBE2B-203ENST00000503080 Q8N1Y9 231 aa6.55□□□□□ -1.36
UBE2B-203ENST00000503080 SMARCC2Q8TAQ2 1214 aa6.55□□□□□ -1.36
UBE2B-203ENST00000503080 NPFFR2Q9Y5X5 522 aa6.55□□□□□ -1.36
UBE2B-203ENST00000503080 HOXA5P20719 270 aa6.54□□□□□ -1.36
UBE2B-203ENST00000503080 SLC6A11P48066 632 aa6.54□□□□□ -1.36
UBE2B-203ENST00000503080 LCE1DQ5T752 114 aa6.54□□□□□ -1.36
UBE2B-203ENST00000503080 MILR1Q7Z6M3 343 aa6.54□□□□□ -1.36
UBE2B-203ENST00000503080 TP53I13Q8NBR0 393 aaPredicted RBP6.54□□□□□ -1.36
UBE2B-203ENST00000503080 SEC14L1Q92503 715 aa6.54□□□□□ -1.36
UBE2B-203ENST00000503080 C8orf37Q96NL8 207 aa6.54□□□□□ -1.36
UBE2B-203ENST00000503080 AARSD1Q9BTE6 412 aaKnown RBP6.54□□□□□ -1.36
UBE2B-203ENST00000503080 RAPGEFL1Q9UHV5 662 aa6.54□□□□□ -1.36
UBE2B-203ENST00000503080 PALD1Q9ULE6 856 aa6.54□□□□□ -1.36
UBE2B-203ENST00000503080 COA3Q9Y2R0 106 aaPredicted RBP6.54□□□□□ -1.36
UBE2B-203ENST00000503080 H7BY64 318 aa6.53□□□□□ -1.36
UBE2B-203ENST00000503080 PRODHO43272 600 aa6.53□□□□□ -1.36
UBE2B-203ENST00000503080 SASH1O94885 1247 aa6.53□□□□□ -1.36
UBE2B-203ENST00000503080 GTF2F1P35269 517 aaKnown RBP eCLIP6.53□□□□□ -1.36
UBE2B-203ENST00000503080 HTRA3P83110 453 aa6.53□□□□□ -1.36
UBE2B-203ENST00000503080 CAP1Q01518 475 aa6.53□□□□□ -1.36
UBE2B-203ENST00000503080 VWA3BQ502W6 1294 aa6.53□□□□□ -1.36
UBE2B-203ENST00000503080 LILRA6Q6PI73 481 aa6.53□□□□□ -1.36
UBE2B-203ENST00000503080 ETV3LQ6ZN32 361 aa6.53□□□□□ -1.36
UBE2B-203ENST00000503080 USP53Q70EK8 1073 aa6.53□□□□□ -1.36
UBE2B-203ENST00000503080 ADGRG2Q8IZP9 1017 aa6.53□□□□□ -1.36
UBE2B-203ENST00000503080 NOX5Q96PH1 765 aa6.53□□□□□ -1.36
UBE2B-203ENST00000503080 ARHGEF4Q9NR80 690 aa6.53□□□□□ -1.36
UBE2B-203ENST00000503080 CLDND1Q9NY35 253 aa6.53□□□□□ -1.36
UBE2B-203ENST00000503080 CCDC85CA6NKD9 419 aa6.52□□□□□ -1.37
UBE2B-203ENST00000503080 NSMFQ6X4W1 530 aa6.52□□□□□ -1.37
UBE2B-203ENST00000503080 SAPCD2Q86UD0 394 aa6.52□□□□□ -1.37
UBE2B-203ENST00000503080 LRRC47Q8N1G4 583 aaKnown RBP6.52□□□□□ -1.37
UBE2B-203ENST00000503080 SYT8Q8NBV8 401 aa6.52□□□□□ -1.37
UBE2B-203ENST00000503080 ZNF526Q8TF50 670 aaPredicted RBP6.52□□□□□ -1.37
UBE2B-203ENST00000503080 DDX11Q96FC9 970 aa6.52□□□□□ -1.37
UBE2B-203ENST00000503080 C20orf173Q96LM9 149 aa6.52□□□□□ -1.37
UBE2B-203ENST00000503080 GPR27Q9NS67 375 aa6.52□□□□□ -1.37
UBE2B-203ENST00000503080 MSRB2Q9Y3D2 182 aa6.52□□□□□ -1.37
UBE2B-203ENST00000503080 TRAV20A0A0B4J274 112 aa6.51□□□□□ -1.37
UBE2B-203ENST00000503080 A0A1B0GTL3 188 aa6.51□□□□□ -1.37
UBE2B-203ENST00000503080 OTOL1A6NHN0 477 aaPredicted RBP6.51□□□□□ -1.37
UBE2B-203ENST00000503080 PDPK1O15530 556 aa6.51□□□□□ -1.37
UBE2B-203ENST00000503080 C8BP07358 591 aa6.51□□□□□ -1.37
UBE2B-203ENST00000503080 CYP2C8P10632 490 aa6.51□□□□□ -1.37
UBE2B-203ENST00000503080 FGFR1P11362 822 aa6.51□□□□□ -1.37
UBE2B-203ENST00000503080 PABPC1P11940 636 aaKnown RBP6.51□□□□□ -1.37
UBE2B-203ENST00000503080 CTSWP56202 376 aa6.51□□□□□ -1.37
UBE2B-203ENST00000503080 YOD1Q5VVQ6 348 aaPredicted RBP6.51□□□□□ -1.37
UBE2B-203ENST00000503080 CD300LDQ6UXZ3 194 aa6.51□□□□□ -1.37
UBE2B-203ENST00000503080 SPATC1Q76KD6 591 aa6.51□□□□□ -1.37
UBE2B-203ENST00000503080 MIB1Q86YT6 1006 aa6.51□□□□□ -1.37
UBE2B-203ENST00000503080 SP8Q8IXZ3 490 aa6.51□□□□□ -1.37
UBE2B-203ENST00000503080 ZDHHC14Q8IZN3 488 aa6.51□□□□□ -1.37
UBE2B-203ENST00000503080 FAM26EQ8N5C1 309 aa6.51□□□□□ -1.37
UBE2B-203ENST00000503080 FEZF2Q8TBJ5 459 aa6.51□□□□□ -1.37
UBE2B-203ENST00000503080 OSBP2Q969R2 916 aa6.51□□□□□ -1.37
UBE2B-203ENST00000503080 ZBTB8AQ96BR9 441 aa6.51□□□□□ -1.37
UBE2B-203ENST00000503080 PHF20Q9BVI0 1012 aa6.51□□□□□ -1.37
UBE2B-203ENST00000503080 XYLT2Q9H1B5 865 aa6.51□□□□□ -1.37
UBE2B-203ENST00000503080 LUC7LQ9NQ29 371 aaKnown RBP6.51□□□□□ -1.37
UBE2B-203ENST00000503080 HGSO14964 777 aaPredicted RBP6.5□□□□□ -1.37
UBE2B-203ENST00000503080 MSCO60682 206 aa6.5□□□□□ -1.37
UBE2B-203ENST00000503080 DGKIO75912 1065 aa6.5□□□□□ -1.37
UBE2B-203ENST00000503080 SLURP1P55000 103 aa6.5□□□□□ -1.37
UBE2B-203ENST00000503080 DLX2Q07687 328 aaPredicted RBP6.5□□□□□ -1.37
UBE2B-203ENST00000503080 CHRNA2Q15822 529 aa6.5□□□□□ -1.37
UBE2B-203ENST00000503080 NBPF6Q5VWK0 638 aa6.5□□□□□ -1.37
UBE2B-203ENST00000503080 STEAP3Q658P3 488 aa6.5□□□□□ -1.37
UBE2B-203ENST00000503080 ZNF669Q96BR6 464 aaPredicted RBP6.5□□□□□ -1.37
UBE2B-203ENST00000503080 NBPF4Q96M43 638 aa6.5□□□□□ -1.37
UBE2B-203ENST00000503080 SYT3Q9BQG1 590 aa6.5□□□□□ -1.37
UBE2B-203ENST00000503080 SPATA9Q9BWV2 254 aa6.5□□□□□ -1.37
UBE2B-203ENST00000503080 CCDC113Q9H0I3 377 aa6.5□□□□□ -1.37
UBE2B-203ENST00000503080 CDIP1Q9H305 208 aa6.5□□□□□ -1.37
UBE2B-203ENST00000503080 EPB41L1Q9H4G0 881 aa6.5□□□□□ -1.37
UBE2B-203ENST00000503080 A0A0G2JLL6 359 aaPredicted RBP6.49□□□□□ -1.37
UBE2B-203ENST00000503080 BLACEA4D250 179 aa6.49□□□□□ -1.37
UBE2B-203ENST00000503080 SH3D21A4FU49 640 aa6.49□□□□□ -1.37
UBE2B-203ENST00000503080 KCNC1P48547 511 aa6.49□□□□□ -1.37
UBE2B-203ENST00000503080 SMAD4Q13485 552 aaKnown RBP6.49□□□□□ -1.37
UBE2B-203ENST00000503080 RASGRF1Q13972 1273 aa6.49□□□□□ -1.37
UBE2B-203ENST00000503080 NTRK3Q16288 839 aa6.49□□□□□ -1.37
UBE2B-203ENST00000503080 MTERF2Q49AM1 385 aa6.49□□□□□ -1.37
UBE2B-203ENST00000503080 KCNT2Q6UVM3 1135 aa6.49□□□□□ -1.37
UBE2B-203ENST00000503080 RSPO2Q6UXX9 243 aaPredicted RBP6.49□□□□□ -1.37
UBE2B-203ENST00000503080 LIPIQ6XZB0 460 aa6.49□□□□□ -1.37
UBE2B-203ENST00000503080 ZC3H18Q86VM9 953 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms