RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 XBP1P17861 261 aa12.31□□□□□ -0.44
UBE2D3-212ENST00000502563 EN2P19622 333 aaPredicted RBP12.31□□□□□ -0.44
UBE2D3-212ENST00000502563 CCND2P30279 289 aa12.31□□□□□ -0.44
UBE2D3-212ENST00000502563 ICAM3P32942 547 aa12.31□□□□□ -0.44
UBE2D3-212ENST00000502563 ADCY7P51828 1080 aa12.31□□□□□ -0.44
UBE2D3-212ENST00000502563 SOX10P56693 466 aa12.31□□□□□ -0.44
UBE2D3-212ENST00000502563 TTLL4Q14679 1199 aa12.31□□□□□ -0.44
UBE2D3-212ENST00000502563 CCSAPQ6IQ19 270 aaPredicted RBP12.31□□□□□ -0.44
UBE2D3-212ENST00000502563 RNF180Q86T96 592 aa12.31□□□□□ -0.44
UBE2D3-212ENST00000502563 KLHDC9Q8NEP7 349 aa12.31□□□□□ -0.44
UBE2D3-212ENST00000502563 PHKBQ93100 1093 aa12.31□□□□□ -0.44
UBE2D3-212ENST00000502563 PURBQ96QR8 312 aaKnown RBP12.31□□□□□ -0.44
UBE2D3-212ENST00000502563 SLC26A6Q9BXS9 759 aa12.31□□□□□ -0.44
UBE2D3-212ENST00000502563 SPC25Q9HBM1 224 aa12.31□□□□□ -0.44
UBE2D3-212ENST00000502563 C6orf50Q9HD87 102 aa12.31□□□□□ -0.44
UBE2D3-212ENST00000502563 ZHX1Q9UKY1 873 aaPredicted RBP12.31□□□□□ -0.44
UBE2D3-212ENST00000502563 KIAA1217Q5T5P2 1943 aa12.31□□□□□ -0.44
UBE2D3-212ENST00000502563 MKI67P46013 3256 aaKnown RBP12.31□□□□□ -0.44
UBE2D3-212ENST00000502563 SPDYE3A6NKU9 549 aa12.3□□□□□ -0.44
UBE2D3-212ENST00000502563 FARP2O94887 1054 aaPredicted RBP12.3□□□□□ -0.44
UBE2D3-212ENST00000502563 CTDNEP1O95476 244 aa12.3□□□□□ -0.44
UBE2D3-212ENST00000502563 CNGA1P29973 690 aa12.3□□□□□ -0.44
UBE2D3-212ENST00000502563 HOXA13P31271 388 aaPredicted RBP12.3□□□□□ -0.44
UBE2D3-212ENST00000502563 SREBF1P36956 1147 aa12.3□□□□□ -0.44
UBE2D3-212ENST00000502563 HMGN5P82970 282 aaKnown RBP12.3□□□□□ -0.44
UBE2D3-212ENST00000502563 TNFAIP2Q03169 654 aa12.3□□□□□ -0.44
UBE2D3-212ENST00000502563 GNPTABQ3T906 1256 aa12.3□□□□□ -0.44
UBE2D3-212ENST00000502563 PRAMEF19Q5SWL8 479 aa12.3□□□□□ -0.44
UBE2D3-212ENST00000502563 CCDC62Q6P9F0 684 aa12.3□□□□□ -0.44
UBE2D3-212ENST00000502563 USP17L6PQ6QN14 398 aa12.3□□□□□ -0.44
UBE2D3-212ENST00000502563 NECAB2Q7Z6G3 386 aa12.3□□□□□ -0.44
UBE2D3-212ENST00000502563 FBXO16Q8IX29 292 aaPredicted RBP12.3□□□□□ -0.44
UBE2D3-212ENST00000502563 PCSK9Q8NBP7 692 aaKnown RBP12.3□□□□□ -0.44
UBE2D3-212ENST00000502563 NSUN7Q8NE18 718 aaKnown RBP12.3□□□□□ -0.44
UBE2D3-212ENST00000502563 CRYGNQ8WXF5 182 aa12.3□□□□□ -0.44
UBE2D3-212ENST00000502563 GPKOWQ92917 476 aaPredicted RBP eCLIP12.3□□□□□ -0.44
UBE2D3-212ENST00000502563 CDHR1Q96JP9 859 aa12.3□□□□□ -0.44
UBE2D3-212ENST00000502563 SENP7Q9BQF6 1050 aa12.3□□□□□ -0.44
UBE2D3-212ENST00000502563 XPNPEP3Q9NQH7 507 aa12.3□□□□□ -0.44
UBE2D3-212ENST00000502563 SYNRGQ9UMZ2 1314 aa12.3□□□□□ -0.44
UBE2D3-212ENST00000502563 hCG_1642624A0A1W2PR95 340 aa12.29□□□□□ -0.44
UBE2D3-212ENST00000502563 M0R2N6 131 aa12.29□□□□□ -0.44
UBE2D3-212ENST00000502563 ADCY6O43306 1168 aa12.29□□□□□ -0.44
UBE2D3-212ENST00000502563 CYP3A4P08684 503 aa12.29□□□□□ -0.44
UBE2D3-212ENST00000502563 EIF2AK2P19525 551 aaKnown RBP12.29□□□□□ -0.44
UBE2D3-212ENST00000502563 SNX17Q15036 470 aa12.29□□□□□ -0.44
UBE2D3-212ENST00000502563 LRRC41Q15345 812 aa12.29□□□□□ -0.44
UBE2D3-212ENST00000502563 NIPA1Q7RTP0 329 aa12.29□□□□□ -0.44
UBE2D3-212ENST00000502563 PIBF1Q8WXW3 757 aa12.29□□□□□ -0.44
UBE2D3-212ENST00000502563 GPRASP2Q96D09 838 aa12.29□□□□□ -0.44
UBE2D3-212ENST00000502563 WDR11Q9BZH6 1224 aa12.29□□□□□ -0.44
UBE2D3-212ENST00000502563 PCDHA6Q9UN73 950 aa12.29□□□□□ -0.44
UBE2D3-212ENST00000502563 PHF24Q9UPV7 400 aa12.29□□□□□ -0.44
UBE2D3-212ENST00000502563 PCDHA8Q9Y5H6 950 aa12.29□□□□□ -0.44
UBE2D3-212ENST00000502563 A6NJR5 290 aa12.28□□□□□ -0.44
UBE2D3-212ENST00000502563 KBTBD13C9JR72 458 aa12.28□□□□□ -0.44
UBE2D3-212ENST00000502563 CTAGE5O15320 804 aa12.28□□□□□ -0.44
UBE2D3-212ENST00000502563 FIBPO43427 364 aa12.28□□□□□ -0.44
UBE2D3-212ENST00000502563 CABYRO75952 493 aa12.28□□□□□ -0.44
UBE2D3-212ENST00000502563 RGS20O76081 388 aa12.28□□□□□ -0.44
UBE2D3-212ENST00000502563 LARGE1O95461 756 aa12.28□□□□□ -0.44
UBE2D3-212ENST00000502563 HOXD8P13378 290 aaPredicted RBP12.28□□□□□ -0.44
UBE2D3-212ENST00000502563 FDPSP14324 419 aaKnown RBP12.28□□□□□ -0.44
UBE2D3-212ENST00000502563 SMPD1P17405 629 aa12.28□□□□□ -0.44
UBE2D3-212ENST00000502563 ADCYAP1R1P41586 468 aa12.28□□□□□ -0.44
UBE2D3-212ENST00000502563 MRPS9P82933 396 aaKnown RBP12.28□□□□□ -0.44
UBE2D3-212ENST00000502563 ST3GAL1Q11201 340 aa12.28□□□□□ -0.44
UBE2D3-212ENST00000502563 STK3Q13188 491 aa12.28□□□□□ -0.44
UBE2D3-212ENST00000502563 NPY5RQ15761 445 aa12.28□□□□□ -0.44
UBE2D3-212ENST00000502563 TLK2Q86UE8 772 aa12.28□□□□□ -0.44
UBE2D3-212ENST00000502563 FCHSD1Q86WN1 690 aa12.28□□□□□ -0.44
UBE2D3-212ENST00000502563 REXO1Q8N1G1 1221 aaKnown RBP12.28□□□□□ -0.44
UBE2D3-212ENST00000502563 HTATIP2Q9BUP3 242 aa12.28□□□□□ -0.44
UBE2D3-212ENST00000502563 PHF20Q9BVI0 1012 aa12.28□□□□□ -0.44
UBE2D3-212ENST00000502563 DDX41Q9UJV9 622 aaKnown RBP12.28□□□□□ -0.44
UBE2D3-212ENST00000502563 PCDHA4Q9UN74 947 aa12.28□□□□□ -0.44
UBE2D3-212ENST00000502563 ELP1O95163 1332 aa12.28□□□□□ -0.44
UBE2D3-212ENST00000502563 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.27□□□□□ -0.45
UBE2D3-212ENST00000502563 SPATA31C2B4DYI2 1134 aa12.27□□□□□ -0.45
UBE2D3-212ENST00000502563 ZEB2O60315 1214 aa12.27□□□□□ -0.45
UBE2D3-212ENST00000502563 KPNA6O60684 536 aa12.27□□□□□ -0.45
UBE2D3-212ENST00000502563 MYCP01106 439 aaPredicted RBP12.27□□□□□ -0.45
UBE2D3-212ENST00000502563 CIITAP33076 1130 aa12.27□□□□□ -0.45
UBE2D3-212ENST00000502563 CPT1AP50416 773 aa12.27□□□□□ -0.45
UBE2D3-212ENST00000502563 USP11P51784 963 aa12.27□□□□□ -0.45
UBE2D3-212ENST00000502563 MLLT1Q03111 559 aaPredicted RBP12.27□□□□□ -0.45
UBE2D3-212ENST00000502563 MOXD1Q6UVY6 613 aa12.27□□□□□ -0.45
UBE2D3-212ENST00000502563 NLRX1Q86UT6 975 aa12.27□□□□□ -0.45
UBE2D3-212ENST00000502563 GIMAP8Q8ND71 665 aaPredicted RBP12.27□□□□□ -0.45
UBE2D3-212ENST00000502563 IL31RAQ8NI17 732 aa12.27□□□□□ -0.45
UBE2D3-212ENST00000502563 LARP6Q9BRS8 491 aaKnown RBP12.27□□□□□ -0.45
UBE2D3-212ENST00000502563 ANO3Q9BYT9 981 aa12.27□□□□□ -0.45
UBE2D3-212ENST00000502563 C11orf49Q9H6J7 331 aa12.27□□□□□ -0.45
UBE2D3-212ENST00000502563 PDGFCQ9NRA1 345 aa12.27□□□□□ -0.45
UBE2D3-212ENST00000502563 ORC3Q9UBD5 711 aaPredicted RBP12.27□□□□□ -0.45
UBE2D3-212ENST00000502563 UBIAD1Q9Y5Z9 338 aa12.27□□□□□ -0.45
UBE2D3-212ENST00000502563 GH1P01241 217 aa12.26□□□□□ -0.45
UBE2D3-212ENST00000502563 TXNP10599 105 aaKnown RBP12.26□□□□□ -0.45
UBE2D3-212ENST00000502563 LAMC2Q13753 1193 aa12.26□□□□□ -0.45
UBE2D3-212ENST00000502563 NEDD9Q14511 834 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms