RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 CATSPER4Q7RTX7 472 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 MILR1Q7Z6M3 343 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 DAAM2Q86T65 1068 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 CARNMT1Q8N4J0 409 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 RBBP8NLQ8NC74 664 aaPredicted RBP4.29□□□□□ -1.72
SUB1-202ENST00000502453 MAP3K14Q99558 947 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 MENTQ9BUN1 341 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 SLC13A1Q9BZW2 595 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 ATP8A2Q9NTI2 1148 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 ZSWIM5Q9P217 1185 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 TRAF6Q9Y4K3 522 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 TISP43B9A030 160 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 B9A039 149 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 PCDHGA12O60330 932 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 ASLP04424 464 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 PABPC1P11940 636 aaKnown RBP4.28□□□□□ -1.72
SUB1-202ENST00000502453 ACPPP15309 386 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 CTCFP49711 727 aaPredicted RBP4.28□□□□□ -1.72
SUB1-202ENST00000502453 MRPS35P82673 323 aaKnown RBP4.28□□□□□ -1.72
SUB1-202ENST00000502453 SLC14A2Q15849 920 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 UNC5DQ6UXZ4 953 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 CEP57L1Q8IYX8 460 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 SAMD14Q8IZD0 417 aaPredicted RBP4.28□□□□□ -1.72
SUB1-202ENST00000502453 GRIN3AQ8TCU5 1115 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 JAKMIP1Q96N16 626 aaKnown RBP4.28□□□□□ -1.72
SUB1-202ENST00000502453 BHMT2Q9H2M3 363 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 SEL1LQ9UBV2 794 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 POLR3KQ9Y2Y1 108 aaPredicted RBP4.28□□□□□ -1.72
SUB1-202ENST00000502453 PCDHGA9Q9Y5G4 932 aaKnown RBP4.28□□□□□ -1.72
SUB1-202ENST00000502453 PCDHGA8Q9Y5G5 932 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 PCDHGA7Q9Y5G6 932 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 PCDHGA6Q9Y5G7 932 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 PCDHGA3Q9Y5H0 932 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 PCDHGA2Q9Y5H1 932 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 SNCAIPQ9Y6H5 919 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 IKBKGQ9Y6K9 419 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 TGFBR3LH3BV60 316 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 CILPO75339 1184 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 TPPPO94811 219 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 KRT10P13645 584 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 HOXD10P28358 340 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 ERVK-21P61565 698 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 ICA1Q05084 483 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 TIGD6Q17RP2 521 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 INF2Q27J81 1249 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 RRP12Q5JTH9 1297 aaKnown RBP4.28□□□□□ -1.72
SUB1-202ENST00000502453 KLHL10Q6JEL2 608 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 ASAP3Q8TDY4 903 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 TGFBRAP1Q8WUH2 860 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 WNT2BQ93097 391 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 PAIP2Q9BPZ3 127 aaKnown RBP4.28□□□□□ -1.72
SUB1-202ENST00000502453 FAM167BQ9BTA0 163 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 POLR3CQ9BUI4 534 aaPredicted RBP4.28□□□□□ -1.72
SUB1-202ENST00000502453 MRPL9Q9BYD2 267 aaKnown RBP4.28□□□□□ -1.72
SUB1-202ENST00000502453 EMC7Q9NPA0 242 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 SEC31BQ9NQW1 1179 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 SAMD15Q9P1V8 674 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 LRFN1Q9P244 771 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 SNX13Q9Y5W8 968 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.28□□□□□ -1.72
SUB1-202ENST00000502453 TMEM110-MUSTN1A8MSY1 372 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 POTECB2RU33 542 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 FZD9O00144 591 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 DDX3XO00571 662 aaKnown RBP eCLIP4.28□□□□□ -1.72
SUB1-202ENST00000502453 KIF1CO43896 1103 aaKnown RBP4.28□□□□□ -1.72
SUB1-202ENST00000502453 GAS7O60861 476 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 NPTXRO95502 500 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 CFBP00751 764 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 GRIA4P48058 902 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 TM4SF4P48230 202 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 PIP4K2BP78356 416 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 KRT32Q14532 448 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 XKR5Q6UX68 686 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 B3GNT9Q6UX72 402 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 CCBE1Q6UXH8 406 aaPredicted RBP4.28□□□□□ -1.72
SUB1-202ENST00000502453 EPN3Q9H201 632 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 TRIT1Q9H3H1 467 aaKnown RBP4.28□□□□□ -1.72
SUB1-202ENST00000502453 PHAXQ9H814 394 aaKnown RBP4.28□□□□□ -1.72
SUB1-202ENST00000502453 SPTLC3Q9NUV7 552 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 DCAF16Q9NXF7 216 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 PDP2Q9P2J9 529 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 KLHL3Q9UH77 587 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 PTPN22Q9Y2R2 807 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 KCNMB2Q9Y691 235 aa4.28□□□□□ -1.72
SUB1-202ENST00000502453 A6NLC8 198 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 PHF20L1A8MW92 1017 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 CNOT4O95628 575 aaKnown RBP4.27□□□□□ -1.73
SUB1-202ENST00000502453 CYP11A1P05108 521 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 ACRP10323 421 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 ACTN2P35609 894 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 PDE6CP51160 858 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 MMP16P51512 607 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 ARSDP51689 593 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 BTKQ06187 659 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 BICDL1Q6ZP65 573 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 KRT25Q7Z3Z0 450 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 LAPTM4BQ86VI4 370 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 ARHGEF25Q86VW2 580 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 ZNF527Q8NB42 609 aa4.27□□□□□ -1.73
SUB1-202ENST00000502453 DIO2Q92813 273 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms