RNA–Protein interactions for RNA: ENST00000502404.5

UBE2D3-211, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-211ENST00000502404 VPS53Q5VIR6 699 aa13.07□□□□□ -0.32
UBE2D3-211ENST00000502404 FBXO16Q8IX29 292 aaPredicted RBP13.07□□□□□ -0.32
UBE2D3-211ENST00000502404 TMEM47Q9BQJ4 181 aa13.07□□□□□ -0.32
UBE2D3-211ENST00000502404 WDR11Q9BZH6 1224 aa13.07□□□□□ -0.32
UBE2D3-211ENST00000502404 MAF1Q9H063 256 aa13.07□□□□□ -0.32
UBE2D3-211ENST00000502404 PDGFCQ9NRA1 345 aa13.07□□□□□ -0.32
UBE2D3-211ENST00000502404 ASTN1O14525 1302 aa13.07□□□□□ -0.32
UBE2D3-211ENST00000502404 ZMYM6O95789 1325 aa13.07□□□□□ -0.32
UBE2D3-211ENST00000502404 SALL3Q9BXA9 1300 aa13.07□□□□□ -0.32
UBE2D3-211ENST00000502404 FOXP2O15409 715 aa13.06□□□□□ -0.32
UBE2D3-211ENST00000502404 PFKMP08237 780 aa13.06□□□□□ -0.32
UBE2D3-211ENST00000502404 HSPD1P10809 573 aaKnown RBP13.06□□□□□ -0.32
UBE2D3-211ENST00000502404 SSTR3P32745 418 aaPredicted RBP13.06□□□□□ -0.32
UBE2D3-211ENST00000502404 ALDH5A1P51649 535 aaPredicted RBP13.06□□□□□ -0.32
UBE2D3-211ENST00000502404 AKNAD1Q5T1N1 836 aa13.06□□□□□ -0.32
UBE2D3-211ENST00000502404 GPATCH4Q5T3I0 446 aaKnown RBP13.06□□□□□ -0.32
UBE2D3-211ENST00000502404 TTBK2Q6IQ55 1244 aa13.06□□□□□ -0.32
UBE2D3-211ENST00000502404 RNF207Q6ZRF8 634 aa13.06□□□□□ -0.32
UBE2D3-211ENST00000502404 ESR2Q92731 530 aa13.06□□□□□ -0.32
UBE2D3-211ENST00000502404 PBX4Q9BYU1 374 aa13.06□□□□□ -0.32
UBE2D3-211ENST00000502404 SLC28A3Q9HAS3 691 aa13.06□□□□□ -0.32
UBE2D3-211ENST00000502404 MCM3APO60318 1980 aa13.06□□□□□ -0.32
UBE2D3-211ENST00000502404 CALML3P27482 149 aa13.05□□□□□ -0.32
UBE2D3-211ENST00000502404 CCL23P55773 120 aa13.05□□□□□ -0.32
UBE2D3-211ENST00000502404 DNERQ8NFT8 737 aa13.05□□□□□ -0.32
UBE2D3-211ENST00000502404 OR6J1Q8NGC5 347 aa13.05□□□□□ -0.32
UBE2D3-211ENST00000502404 SCFD2Q8WU76 684 aa13.05□□□□□ -0.32
UBE2D3-211ENST00000502404 RILPL2Q969X0 211 aa13.05□□□□□ -0.32
UBE2D3-211ENST00000502404 FAM227BQ96M60 508 aa13.05□□□□□ -0.32
UBE2D3-211ENST00000502404 MTG1Q9BT17 334 aaPredicted RBP13.05□□□□□ -0.32
UBE2D3-211ENST00000502404 NOC4LQ9BVI4 516 aaKnown RBP13.05□□□□□ -0.32
UBE2D3-211ENST00000502404 TRPV6Q9H1D0 765 aa13.05□□□□□ -0.32
UBE2D3-211ENST00000502404 ALDH8A1Q9H2A2 487 aaPredicted RBP13.05□□□□□ -0.32
UBE2D3-211ENST00000502404 SLC4A7Q9Y6M7 1214 aa13.05□□□□□ -0.32
UBE2D3-211ENST00000502404 FRMPD2Q68DX3 1309 aaPredicted RBP13.05□□□□□ -0.32
UBE2D3-211ENST00000502404 WDR19Q8NEZ3 1342 aa13.05□□□□□ -0.32
UBE2D3-211ENST00000502404 RBM47A0AV96 593 aaKnown RBP13.04□□□□□ -0.32
UBE2D3-211ENST00000502404 NFIBO00712 420 aa13.04□□□□□ -0.32
UBE2D3-211ENST00000502404 ZNF213O14771 459 aa13.04□□□□□ -0.32
UBE2D3-211ENST00000502404 B4GALT4O60513 344 aa13.04□□□□□ -0.32
UBE2D3-211ENST00000502404 MYL3P08590 195 aa13.04□□□□□ -0.32
UBE2D3-211ENST00000502404 PDHBP11177 359 aa13.04□□□□□ -0.32
UBE2D3-211ENST00000502404 ACTN1P12814 892 aa13.04□□□□□ -0.32
UBE2D3-211ENST00000502404 PSMC6P62333 389 aa13.04□□□□□ -0.32
UBE2D3-211ENST00000502404 ZNF543Q08ER8 600 aa13.04□□□□□ -0.32
UBE2D3-211ENST00000502404 PPP2R5BQ15173 497 aa13.04□□□□□ -0.32
UBE2D3-211ENST00000502404 TJAP1Q5JTD0 557 aa13.04□□□□□ -0.32
UBE2D3-211ENST00000502404 OTOP2Q7RTS6 562 aa13.04□□□□□ -0.32
UBE2D3-211ENST00000502404 IQCA1Q86XH1 822 aa13.04□□□□□ -0.32
UBE2D3-211ENST00000502404 DGKHQ86XP1 1220 aa13.04□□□□□ -0.32
UBE2D3-211ENST00000502404 RETREG2Q8NC44 543 aa13.04□□□□□ -0.32
UBE2D3-211ENST00000502404 RGS22Q8NE09 1264 aa13.04□□□□□ -0.32
UBE2D3-211ENST00000502404 ANKK1Q8NFD2 765 aa13.04□□□□□ -0.32
UBE2D3-211ENST00000502404 RWDD1Q9H446 243 aaPredicted RBP13.04□□□□□ -0.32
UBE2D3-211ENST00000502404 GRIN2DO15399 1336 aa13.04□□□□□ -0.32
UBE2D3-211ENST00000502404 CCDC171Q6TFL3 1326 aa13.04□□□□□ -0.32
UBE2D3-211ENST00000502404 A0A0D9SFI3 127 aa13.03□□□□□ -0.32
UBE2D3-211ENST00000502404 GRXCR1A8MXD5 290 aa13.03□□□□□ -0.32
UBE2D3-211ENST00000502404 HIP1O00291 1037 aa13.03□□□□□ -0.32
UBE2D3-211ENST00000502404 RFC2P35250 354 aa13.03□□□□□ -0.32
UBE2D3-211ENST00000502404 HAND2P61296 217 aa13.03□□□□□ -0.32
UBE2D3-211ENST00000502404 RPS6P62753 249 aaKnown RBP13.03□□□□□ -0.32
UBE2D3-211ENST00000502404 PURAQ00577 322 aaKnown RBP13.03□□□□□ -0.32
UBE2D3-211ENST00000502404 PTPN11Q06124 597 aaPredicted RBP13.03□□□□□ -0.32
UBE2D3-211ENST00000502404 NMIQ13287 307 aaPredicted RBP13.03□□□□□ -0.32
UBE2D3-211ENST00000502404 IL27Q8NEV9 243 aa13.03□□□□□ -0.32
UBE2D3-211ENST00000502404 ATXN2LQ8WWM7 1075 aaKnown RBP13.03□□□□□ -0.32
UBE2D3-211ENST00000502404 CRBNQ96SW2 442 aa13.03□□□□□ -0.32
UBE2D3-211ENST00000502404 PRDM12Q9H4Q4 367 aa13.03□□□□□ -0.32
UBE2D3-211ENST00000502404 TNKSO95271 1327 aa13.03□□□□□ -0.32
UBE2D3-211ENST00000502404 UNC80Q8N2C7 3258 aa13.02□□□□□ -0.32
UBE2D3-211ENST00000502404 GOLGA8CPA6NN73 597 aa13.02□□□□□ -0.33
UBE2D3-211ENST00000502404 ZBBXA8MT70 800 aa13.02□□□□□ -0.33
UBE2D3-211ENST00000502404 SNHG28P0DPA3 235 aa13.02□□□□□ -0.33
UBE2D3-211ENST00000502404 CD46P15529 392 aa13.02□□□□□ -0.33
UBE2D3-211ENST00000502404 IGFBP4P22692 258 aa13.02□□□□□ -0.33
UBE2D3-211ENST00000502404 TTLL4Q14679 1199 aa13.02□□□□□ -0.33
UBE2D3-211ENST00000502404 FAM47CQ5HY64 1035 aa13.02□□□□□ -0.33
UBE2D3-211ENST00000502404 NFRKBQ6P4R8 1299 aa13.02□□□□□ -0.33
UBE2D3-211ENST00000502404 MCF2L2Q86YR7 1114 aa13.02□□□□□ -0.33
UBE2D3-211ENST00000502404 CLEC4DQ8WXI8 215 aa13.02□□□□□ -0.33
UBE2D3-211ENST00000502404 PPM1EQ8WY54 764 aa13.02□□□□□ -0.33
UBE2D3-211ENST00000502404 PURBQ96QR8 312 aaKnown RBP13.02□□□□□ -0.33
UBE2D3-211ENST00000502404 KAT14Q9H8E8 782 aa13.02□□□□□ -0.33
UBE2D3-211ENST00000502404 CXXC1Q9P0U4 656 aaPredicted RBP13.02□□□□□ -0.33
UBE2D3-211ENST00000502404 NOD1Q9Y239 953 aa13.02□□□□□ -0.33
UBE2D3-211ENST00000502404 PCDHA11Q9Y5I1 949 aa13.02□□□□□ -0.33
UBE2D3-211ENST00000502404 A6NJR5 290 aa13.01□□□□□ -0.33
UBE2D3-211ENST00000502404 DDX11L8A8MPP1 907 aa13.01□□□□□ -0.33
UBE2D3-211ENST00000502404 TXNP10599 105 aaKnown RBP13.01□□□□□ -0.33
UBE2D3-211ENST00000502404 ATP2A2P16615 1042 aaKnown RBP13.01□□□□□ -0.33
UBE2D3-211ENST00000502404 SDSP20132 328 aa13.01□□□□□ -0.33
UBE2D3-211ENST00000502404 BFSP2Q13515 415 aa13.01□□□□□ -0.33
UBE2D3-211ENST00000502404 SLC30A10Q6XR72 485 aa13.01□□□□□ -0.33
UBE2D3-211ENST00000502404 RASGRP2Q7LDG7 609 aa13.01□□□□□ -0.33
UBE2D3-211ENST00000502404 ZNF589Q86UQ0 364 aaPredicted RBP13.01□□□□□ -0.33
UBE2D3-211ENST00000502404 CCDC155Q8N6L0 562 aa13.01□□□□□ -0.33
UBE2D3-211ENST00000502404 FAM117AQ9C073 453 aa13.01□□□□□ -0.33
UBE2D3-211ENST00000502404 LNPKQ9C0E8 428 aa13.01□□□□□ -0.33
UBE2D3-211ENST00000502404 WNT8AQ9H1J5 351 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms