RNA–Protein interactions for RNA: ENST00000499006.6

LINC01550-201, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 1,458 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-201ENST00000499006 IGHA2P01877 340 aa22.22■■□□□ 1.15
LINC01550-201ENST00000499006 FAM86B2P0C5J1 330 aa22.22■■□□□ 1.15
LINC01550-201ENST00000499006 XRCC5P13010 732 aaKnown RBP22.22■■□□□ 1.15
LINC01550-201ENST00000499006 ATP2B1P20020 1258 aa22.22■■□□□ 1.15
LINC01550-201ENST00000499006 DNM1Q05193 864 aaKnown RBP22.22■■□□□ 1.15
LINC01550-201ENST00000499006 PRKCZQ05513 592 aa22.22■■□□□ 1.15
LINC01550-201ENST00000499006 ATL3Q6DD88 541 aa22.22■■□□□ 1.15
LINC01550-201ENST00000499006 CHAMP1Q96JM3 812 aa22.22■■□□□ 1.15
LINC01550-201ENST00000499006 USP28Q96RU2 1077 aa22.22■■□□□ 1.15
LINC01550-201ENST00000499006 NAP1L4Q99733 375 aaKnown RBP22.22■■□□□ 1.15
LINC01550-201ENST00000499006 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.22■■□□□ 1.15
LINC01550-201ENST00000499006 IGLV3-22A0A075B6J6 115 aa22.22■■□□□ 1.15
LINC01550-201ENST00000499006 B4DLN1 442 aa22.22■■□□□ 1.15
LINC01550-201ENST00000499006 STAM2O75886 525 aa22.22■■□□□ 1.15
LINC01550-201ENST00000499006 TDP2O95551 362 aa22.22■■□□□ 1.15
LINC01550-201ENST00000499006 MYCLP12524 364 aaPredicted RBP22.22■■□□□ 1.15
LINC01550-201ENST00000499006 GCFC2P16383 781 aaKnown RBP22.22■■□□□ 1.15
LINC01550-201ENST00000499006 CYP2B6P20813 491 aa22.22■■□□□ 1.15
LINC01550-201ENST00000499006 FLT3LGP49771 235 aa22.22■■□□□ 1.15
LINC01550-201ENST00000499006 ORC2Q13416 577 aaPredicted RBP22.22■■□□□ 1.15
LINC01550-201ENST00000499006 MSL3Q8N5Y2 521 aaKnown RBP22.22■■□□□ 1.15
LINC01550-201ENST00000499006 CYP2W1Q8TAV3 490 aa22.22■■□□□ 1.15
LINC01550-201ENST00000499006 ZNF396Q96N95 335 aaPredicted RBP22.22■■□□□ 1.15
LINC01550-201ENST00000499006 MPHOSPH6Q99547 160 aaKnown RBP22.22■■□□□ 1.15
LINC01550-201ENST00000499006 FTOQ9C0B1 505 aaKnown RBP eCLIP22.22■■□□□ 1.15
LINC01550-201ENST00000499006 POLR3EQ9NVU0 708 aa22.22■■□□□ 1.15
LINC01550-201ENST00000499006 SRRDQ9UH36 339 aa22.22■■□□□ 1.15
LINC01550-201ENST00000499006 UBIAD1Q9Y5Z9 338 aa22.22■■□□□ 1.15
LINC01550-201ENST00000499006 CLIC4Q9Y696 253 aa22.22■■□□□ 1.15
LINC01550-201ENST00000499006 ITGB5P18084 799 aa22.21■■□□□ 1.15
LINC01550-201ENST00000499006 HOXD10P28358 340 aa22.21■■□□□ 1.15
LINC01550-201ENST00000499006 ARHGEF6Q15052 776 aa22.21■■□□□ 1.15
LINC01550-201ENST00000499006 ZNF174Q15697 407 aa22.21■■□□□ 1.15
LINC01550-201ENST00000499006 STXBP2Q15833 593 aa22.21■■□□□ 1.15
LINC01550-201ENST00000499006 Q4G0T1 1027 aa22.21■■□□□ 1.15
LINC01550-201ENST00000499006 CEP55Q53EZ4 464 aa22.21■■□□□ 1.15
LINC01550-201ENST00000499006 ANO1Q5XXA6 986 aa22.21■■□□□ 1.15
LINC01550-201ENST00000499006 OLFML2BQ68BL8 750 aa22.21■■□□□ 1.15
LINC01550-201ENST00000499006 ARMCX2Q7L311 632 aa22.21■■□□□ 1.15
LINC01550-201ENST00000499006 LENG9Q96B70 501 aa22.21■■□□□ 1.15
LINC01550-201ENST00000499006 MXRA8Q9BRK3 442 aa22.21■■□□□ 1.15
LINC01550-201ENST00000499006 FLRT1Q9NZU1 646 aa22.21■■□□□ 1.15
LINC01550-201ENST00000499006 TFIP11Q9UBB9 837 aaKnown RBP22.21■■□□□ 1.15
LINC01550-201ENST00000499006 SYNGAP1Q96PV0 1343 aa22.2■■□□□ 1.14
LINC01550-201ENST00000499006 MEIS1O00470 390 aa22.2■■□□□ 1.14
LINC01550-201ENST00000499006 SLC37A4O43826 429 aa22.2■■□□□ 1.14
LINC01550-201ENST00000499006 EIF3JO75822 258 aaKnown RBP22.2■■□□□ 1.14
LINC01550-201ENST00000499006 RGS20O76081 388 aa22.2■■□□□ 1.14
LINC01550-201ENST00000499006 MCM7P33993 719 aa22.2■■□□□ 1.14
LINC01550-201ENST00000499006 NASPP49321 788 aaPredicted RBP22.2■■□□□ 1.14
LINC01550-201ENST00000499006 PDE4DQ08499 809 aa22.2■■□□□ 1.14
LINC01550-201ENST00000499006 SF3A1Q15459 793 aaKnown RBP22.2■■□□□ 1.14
LINC01550-201ENST00000499006 CLEC17AQ6ZS10 378 aa22.2■■□□□ 1.14
LINC01550-201ENST00000499006 NIPA1Q7RTP0 329 aa22.2■■□□□ 1.14
LINC01550-201ENST00000499006 ZFP91Q96JP5 570 aaPredicted RBP22.2■■□□□ 1.14
LINC01550-201ENST00000499006 INPP4AQ96PE3 977 aaPredicted RBP22.2■■□□□ 1.14
LINC01550-201ENST00000499006 TINF2Q9BSI4 451 aa22.2■■□□□ 1.14
LINC01550-201ENST00000499006 RTEL1Q9NZ71 1219 aa22.2■■□□□ 1.14
LINC01550-201ENST00000499006 FOXN1O15353 648 aa22.19■■□□□ 1.14
LINC01550-201ENST00000499006 HSPA8P11142 646 aaKnown RBP22.19■■□□□ 1.14
LINC01550-201ENST00000499006 ZNF76P36508 570 aa22.19■■□□□ 1.14
LINC01550-201ENST00000499006 IRF5Q13568 498 aa22.19■■□□□ 1.14
LINC01550-201ENST00000499006 PTPAQ15257 358 aa22.19■■□□□ 1.14
LINC01550-201ENST00000499006 CCL14Q16627 93 aa22.19■■□□□ 1.14
LINC01550-201ENST00000499006 C4orf32Q8N8J7 132 aa22.19■■□□□ 1.14
LINC01550-201ENST00000499006 JADE2Q9NQC1 790 aa22.19■■□□□ 1.14
LINC01550-201ENST00000499006 DDX25Q9UHL0 483 aaKnown RBP22.19■■□□□ 1.14
LINC01550-201ENST00000499006 CFAP45Q9UL16 551 aa22.19■■□□□ 1.14
LINC01550-201ENST00000499006 WDR81Q562E7 1941 aa22.19■■□□□ 1.14
LINC01550-201ENST00000499006 SNAI1O95863 264 aaPredicted RBP22.18■■□□□ 1.14
LINC01550-201ENST00000499006 KRT85P78386 507 aa22.18■■□□□ 1.14
LINC01550-201ENST00000499006 WDR11Q9BZH6 1224 aa22.18■■□□□ 1.14
LINC01550-201ENST00000499006 NEMFO60524 1076 aa22.17■■□□□ 1.14
LINC01550-201ENST00000499006 HSPA1AP0DMV8 641 aaKnown RBP22.17■■□□□ 1.14
LINC01550-201ENST00000499006 HSPA1BP0DMV9 641 aaKnown RBP22.17■■□□□ 1.14
LINC01550-201ENST00000499006 SETQ01105 290 aaPredicted RBP22.17■■□□□ 1.14
LINC01550-201ENST00000499006 CEBPZQ03701 1054 aaKnown RBP22.17■■□□□ 1.14
LINC01550-201ENST00000499006 PRR16Q569H4 304 aa22.17■■□□□ 1.14
LINC01550-201ENST00000499006 POTEDQ86YR6 584 aa22.17■■□□□ 1.14
LINC01550-201ENST00000499006 KATNBL1Q9H079 304 aa22.17■■□□□ 1.14
LINC01550-201ENST00000499006 TMEM60Q9H2L4 133 aa22.17■■□□□ 1.14
LINC01550-201ENST00000499006 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.17■■□□□ 1.14
LINC01550-201ENST00000499006 MORC2Q9Y6X9 1032 aaPredicted RBP22.17■■□□□ 1.14
LINC01550-201ENST00000499006 BAG4O95429 457 aaKnown RBP22.16■■□□□ 1.14
LINC01550-201ENST00000499006 YEATS4O95619 227 aa22.16■■□□□ 1.14
LINC01550-201ENST00000499006 PRMT2P55345 433 aa22.16■■□□□ 1.14
LINC01550-201ENST00000499006 PTGDRQ13258 359 aa22.16■■□□□ 1.14
LINC01550-201ENST00000499006 OTOP1Q7RTM1 612 aa22.16■■□□□ 1.14
LINC01550-201ENST00000499006 PLA2G4DQ86XP0 818 aa22.16■■□□□ 1.14
LINC01550-201ENST00000499006 LINC00301Q8NCQ3 95 aa22.16■■□□□ 1.14
LINC01550-201ENST00000499006 ETNPPLQ8TBG4 499 aa22.16■■□□□ 1.14
LINC01550-201ENST00000499006 GPRASP2Q96D09 838 aa22.16■■□□□ 1.14
LINC01550-201ENST00000499006 MTMR9Q96QG7 549 aa22.16■■□□□ 1.14
LINC01550-201ENST00000499006 KCNMB3Q9NPA1 279 aa22.16■■□□□ 1.14
LINC01550-201ENST00000499006 CEP131Q9UPN4 1083 aa22.16■■□□□ 1.14
LINC01550-201ENST00000499006 CNPY2Q9Y2B0 182 aa22.16■■□□□ 1.14
LINC01550-201ENST00000499006 BMP15O95972 392 aa22.15■■□□□ 1.14
LINC01550-201ENST00000499006 ARP10275 920 aa22.15■■□□□ 1.14
LINC01550-201ENST00000499006 ATP2C1P98194 919 aaPredicted RBP22.15■■□□□ 1.14
LINC01550-201ENST00000499006 SEMA3FQ13275 785 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms