RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 ARFGAP3Q9NP61 516 aa13.91□□□□□ -0.18
AFF3-215ENST00000498090 KBTBD4Q9NVX7 518 aa13.91□□□□□ -0.18
AFF3-215ENST00000498090 ZBTB21Q9ULJ3 1066 aa13.91□□□□□ -0.18
AFF3-215ENST00000498090 PCDHA6Q9UN73 950 aa13.91□□□□□ -0.18
AFF3-215ENST00000498090 STX8Q9UNK0 236 aa13.91□□□□□ -0.18
AFF3-215ENST00000498090 PCDHA8Q9Y5H6 950 aa13.91□□□□□ -0.18
AFF3-215ENST00000498090 CEP350Q5VT06 3117 aa13.91□□□□□ -0.18
AFF3-215ENST00000498090 BICDL2A1A5D9 508 aa13.91□□□□□ -0.18
AFF3-215ENST00000498090 CCDC151A5D8V7 595 aa13.91□□□□□ -0.18
AFF3-215ENST00000498090 CAP2P40123 477 aa13.91□□□□□ -0.18
AFF3-215ENST00000498090 AMPD3Q01432 767 aa13.91□□□□□ -0.18
AFF3-215ENST00000498090 PTPN21Q16825 1174 aa13.91□□□□□ -0.18
AFF3-215ENST00000498090 TSR1Q2NL82 804 aaKnown RBP13.91□□□□□ -0.18
AFF3-215ENST00000498090 TEX35Q5T0J7 233 aa13.91□□□□□ -0.18
AFF3-215ENST00000498090 SIAH1Q8IUQ4 282 aa13.91□□□□□ -0.18
AFF3-215ENST00000498090 FAM114A1Q8IWE2 563 aa13.91□□□□□ -0.18
AFF3-215ENST00000498090 SMYD4Q8IYR2 804 aaPredicted RBP13.91□□□□□ -0.18
AFF3-215ENST00000498090 RBM46Q8TBY0 533 aaKnown RBP13.91□□□□□ -0.18
AFF3-215ENST00000498090 CDCA5Q96FF9 252 aa13.91□□□□□ -0.18
AFF3-215ENST00000498090 NUP88Q99567 741 aaPredicted RBP13.91□□□□□ -0.18
AFF3-215ENST00000498090 DESI2Q9BSY9 194 aa13.91□□□□□ -0.18
AFF3-215ENST00000498090 NUP58Q9BVL2 599 aa13.91□□□□□ -0.18
AFF3-215ENST00000498090 ZMYND12Q9H0C1 365 aa13.91□□□□□ -0.18
AFF3-215ENST00000498090 MAGEC2Q9UBF1 373 aaPredicted RBP13.91□□□□□ -0.18
AFF3-215ENST00000498090 ZNF112Q9UJU3 913 aa13.91□□□□□ -0.18
AFF3-215ENST00000498090 STXBP3O00186 592 aa13.9□□□□□ -0.18
AFF3-215ENST00000498090 CASP1P29466 404 aa13.9□□□□□ -0.18
AFF3-215ENST00000498090 INPP5BP32019 993 aa13.9□□□□□ -0.18
AFF3-215ENST00000498090 PRCPP42785 496 aa13.9□□□□□ -0.18
AFF3-215ENST00000498090 FXR1P51114 621 aaKnown RBP eCLIP13.9□□□□□ -0.18
AFF3-215ENST00000498090 CHMP4BP1P59074 171 aa13.9□□□□□ -0.18
AFF3-215ENST00000498090 KARSQ15046 597 aaKnown RBP13.9□□□□□ -0.18
AFF3-215ENST00000498090 WHAMMP3Q1A5X7 153 aa13.9□□□□□ -0.18
AFF3-215ENST00000498090 COBLL1Q53SF7 1204 aa13.9□□□□□ -0.18
AFF3-215ENST00000498090 DCAF15Q66K64 600 aa13.9□□□□□ -0.18
AFF3-215ENST00000498090 ZNF662Q6ZS27 426 aa13.9□□□□□ -0.18
AFF3-215ENST00000498090 LRRC47Q8N1G4 583 aaKnown RBP13.9□□□□□ -0.18
AFF3-215ENST00000498090 MSL3Q8N5Y2 521 aaKnown RBP13.9□□□□□ -0.18
AFF3-215ENST00000498090 GIMAP8Q8ND71 665 aaPredicted RBP13.9□□□□□ -0.18
AFF3-215ENST00000498090 RASSF8Q8NHQ8 419 aa13.9□□□□□ -0.18
AFF3-215ENST00000498090 CPLX3Q8WVH0 158 aa13.9□□□□□ -0.18
AFF3-215ENST00000498090 HNRNPLLQ8WVV9 542 aaKnown RBP13.9□□□□□ -0.18
AFF3-215ENST00000498090 ZNF341Q9BYN7 854 aa13.9□□□□□ -0.18
AFF3-215ENST00000498090 C6orf50Q9HD87 102 aa13.9□□□□□ -0.18
AFF3-215ENST00000498090 PAPPA2Q9BXP8 1791 aa13.9□□□□□ -0.18
AFF3-215ENST00000498090 POLR2AP24928 1970 aaKnown RBP13.9□□□□□ -0.18
AFF3-215ENST00000498090 LGALS16A8MUM7 142 aa13.89□□□□□ -0.19
AFF3-215ENST00000498090 TTLL1O95922 423 aa13.89□□□□□ -0.19
AFF3-215ENST00000498090 EEF2P13639 858 aaKnown RBP13.89□□□□□ -0.19
AFF3-215ENST00000498090 CCT6AP40227 531 aaKnown RBP13.89□□□□□ -0.19
AFF3-215ENST00000498090 DNM2P50570 870 aa13.89□□□□□ -0.19
AFF3-215ENST00000498090 ICA1Q05084 483 aa13.89□□□□□ -0.19
AFF3-215ENST00000498090 MTF1Q14872 753 aa13.89□□□□□ -0.19
AFF3-215ENST00000498090 MAP1SQ66K74 1059 aaPredicted RBP13.89□□□□□ -0.19
AFF3-215ENST00000498090 CC2D1AQ6P1N0 951 aaPredicted RBP13.89□□□□□ -0.19
AFF3-215ENST00000498090 CCDC84Q86UT8 332 aaPredicted RBP13.89□□□□□ -0.19
AFF3-215ENST00000498090 EHBP1Q8NDI1 1231 aa13.89□□□□□ -0.19
AFF3-215ENST00000498090 OR8K1Q8NGG5 319 aa13.89□□□□□ -0.19
AFF3-215ENST00000498090 LZTFL1Q9NQ48 299 aa13.89□□□□□ -0.19
AFF3-215ENST00000498090 ESYT2A0FGR8 921 aa13.88□□□□□ -0.19
AFF3-215ENST00000498090 PARP1P09874 1014 aaKnown RBP13.88□□□□□ -0.19
AFF3-215ENST00000498090 KRT9P35527 623 aa13.88□□□□□ -0.19
AFF3-215ENST00000498090 UBXN1Q04323 297 aa13.88□□□□□ -0.19
AFF3-215ENST00000498090 NONOQ15233 471 aaKnown RBP eCLIP13.88□□□□□ -0.19
AFF3-215ENST00000498090 SUPT20HL1Q3ZLR7 823 aa13.88□□□□□ -0.19
AFF3-215ENST00000498090 HEATR3Q7Z4Q2 680 aa13.88□□□□□ -0.19
AFF3-215ENST00000498090 MB21D1Q8N884 522 aa13.88□□□□□ -0.19
AFF3-215ENST00000498090 STAMQ92783 540 aa13.88□□□□□ -0.19
AFF3-215ENST00000498090 GPKOWQ92917 476 aaPredicted RBP eCLIP13.88□□□□□ -0.19
AFF3-215ENST00000498090 HOOK2Q96ED9 719 aa13.88□□□□□ -0.19
AFF3-215ENST00000498090 WRNIP1Q96S55 665 aa13.88□□□□□ -0.19
AFF3-215ENST00000498090 DNAJC7Q99615 494 aa13.88□□□□□ -0.19
AFF3-215ENST00000498090 NAPGQ99747 312 aaPredicted RBP13.88□□□□□ -0.19
AFF3-215ENST00000498090 VPS16Q9H269 839 aa13.88□□□□□ -0.19
AFF3-215ENST00000498090 HAUS4Q9H6D7 363 aa13.88□□□□□ -0.19
AFF3-215ENST00000498090 KANSL2Q9H9L4 492 aa13.88□□□□□ -0.19
AFF3-215ENST00000498090 NYAP2Q9P242 653 aa13.88□□□□□ -0.19
AFF3-215ENST00000498090 CLEC11AQ9Y240 323 aa13.88□□□□□ -0.19
AFF3-215ENST00000498090 A0A1W2PRG0 241 aa13.88□□□□□ -0.19
AFF3-215ENST00000498090 CCDC66A2RUB6 948 aa13.88□□□□□ -0.19
AFF3-215ENST00000498090 ERLIN1O75477 346 aa13.88□□□□□ -0.19
AFF3-215ENST00000498090 OR52Z1P0C646 297 aa13.88□□□□□ -0.19
AFF3-215ENST00000498090 KRT83P78385 493 aa13.88□□□□□ -0.19
AFF3-215ENST00000498090 ATP2B2Q01814 1243 aa13.88□□□□□ -0.19
AFF3-215ENST00000498090 PRKG1Q13976 671 aa13.88□□□□□ -0.19
AFF3-215ENST00000498090 NAALADL2Q58DX5 795 aa13.88□□□□□ -0.19
AFF3-215ENST00000498090 ZNF569Q5MCW4 686 aa13.88□□□□□ -0.19
AFF3-215ENST00000498090 LDHDQ86WU2 507 aa13.88□□□□□ -0.19
AFF3-215ENST00000498090 STAG2Q8N3U4 1231 aa13.88□□□□□ -0.19
AFF3-215ENST00000498090 KLRG1Q96E93 195 aa13.88□□□□□ -0.19
AFF3-215ENST00000498090 RRP36Q96EU6 259 aaKnown RBP13.88□□□□□ -0.19
AFF3-215ENST00000498090 C7orf25Q9BPX7 421 aa13.88□□□□□ -0.19
AFF3-215ENST00000498090 PARD6BQ9BYG5 372 aa13.88□□□□□ -0.19
AFF3-215ENST00000498090 UBXN6Q9BZV1 441 aa13.88□□□□□ -0.19
AFF3-215ENST00000498090 GBP3Q9H0R5 595 aa13.88□□□□□ -0.19
AFF3-215ENST00000498090 TAB2Q9NYJ8 693 aa13.88□□□□□ -0.19
AFF3-215ENST00000498090 SEC63Q9UGP8 760 aaKnown RBP13.88□□□□□ -0.19
AFF3-215ENST00000498090 CAPN11Q9UMQ6 739 aa13.88□□□□□ -0.19
AFF3-215ENST00000498090 MTMR7Q9Y216 660 aa13.88□□□□□ -0.19
AFF3-215ENST00000498090 LUC7L2Q9Y383 392 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms