RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 IWS1Q96ST2 819 aa15.44■□□□□ 0.06
CPNE1-227ENST00000498056 ZSCAN16Q9H4T2 348 aaPredicted RBP15.44■□□□□ 0.06
CPNE1-227ENST00000498056 CHMP5Q9NZZ3 219 aa15.44■□□□□ 0.06
CPNE1-227ENST00000498056 ZHX1Q9UKY1 873 aaPredicted RBP15.44■□□□□ 0.06
CPNE1-227ENST00000498056 PTCH2Q9Y6C5 1203 aa15.44■□□□□ 0.06
CPNE1-227ENST00000498056 SYNGAP1Q96PV0 1343 aa15.43■□□□□ 0.06
CPNE1-227ENST00000498056 LOC102724159A0A0B4J2E5 919 aa15.43■□□□□ 0.06
CPNE1-227ENST00000498056 ADCY3O60266 1144 aa15.43■□□□□ 0.06
CPNE1-227ENST00000498056 CCNT1O60563 726 aaKnown RBP15.43■□□□□ 0.06
CPNE1-227ENST00000498056 XRCC5P13010 732 aaKnown RBP15.43■□□□□ 0.06
CPNE1-227ENST00000498056 EDNRBP24530 442 aa15.43■□□□□ 0.06
CPNE1-227ENST00000498056 CYP2C19P33261 490 aa15.43■□□□□ 0.06
CPNE1-227ENST00000498056 IRF5Q13568 498 aa15.43■□□□□ 0.06
CPNE1-227ENST00000498056 NBR1Q14596 966 aa15.43■□□□□ 0.06
CPNE1-227ENST00000498056 PWP2Q15269 919 aaKnown RBP15.43■□□□□ 0.06
CPNE1-227ENST00000498056 STXBP2Q15833 593 aa15.43■□□□□ 0.06
CPNE1-227ENST00000498056 OLFML2BQ68BL8 750 aa15.43■□□□□ 0.06
CPNE1-227ENST00000498056 CTU1Q7Z7A3 348 aaKnown RBP15.43■□□□□ 0.06
CPNE1-227ENST00000498056 TINF2Q9BSI4 451 aa15.43■□□□□ 0.06
CPNE1-227ENST00000498056 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.43■□□□□ 0.06
CPNE1-227ENST00000498056 RTEL1Q9NZ71 1219 aa15.43■□□□□ 0.06
CPNE1-227ENST00000498056 CNPY2Q9Y2B0 182 aa15.43■□□□□ 0.06
CPNE1-227ENST00000498056 ZDHHC9Q9Y397 364 aa15.43■□□□□ 0.06
CPNE1-227ENST00000498056 HTTP42858 3142 aa15.42■□□□□ 0.06
CPNE1-227ENST00000498056 WNT7AO00755 349 aa15.42■□□□□ 0.06
CPNE1-227ENST00000498056 HMGCRP04035 888 aa15.42■□□□□ 0.06
CPNE1-227ENST00000498056 MRPS9P82933 396 aaKnown RBP15.42■□□□□ 0.06
CPNE1-227ENST00000498056 PRR16Q569H4 304 aa15.42■□□□□ 0.06
CPNE1-227ENST00000498056 RILPL1Q5EBL4 403 aa15.42■□□□□ 0.06
CPNE1-227ENST00000498056 TRMT44Q8IYL2 757 aaKnown RBP15.42■□□□□ 0.06
CPNE1-227ENST00000498056 MSL3Q8N5Y2 521 aaKnown RBP15.42■□□□□ 0.06
CPNE1-227ENST00000498056 SLAIN1Q8ND83 568 aa15.42■□□□□ 0.06
CPNE1-227ENST00000498056 CRYGNQ8WXF5 182 aa15.42■□□□□ 0.06
CPNE1-227ENST00000498056 NAP1L4Q99733 375 aaKnown RBP15.42■□□□□ 0.06
CPNE1-227ENST00000498056 DDX25Q9UHL0 483 aaKnown RBP15.42■□□□□ 0.06
CPNE1-227ENST00000498056 LOXHD1Q8IVV2 1947 aa15.41■□□□□ 0.06
CPNE1-227ENST00000498056 SLC37A4O43826 429 aa15.41■□□□□ 0.06
CPNE1-227ENST00000498056 NEMFO60524 1076 aa15.41■□□□□ 0.06
CPNE1-227ENST00000498056 CYP3A4P08684 503 aa15.41■□□□□ 0.06
CPNE1-227ENST00000498056 GCFC2P16383 781 aaKnown RBP15.41■□□□□ 0.06
CPNE1-227ENST00000498056 NCLP19338 710 aaKnown RBP15.41■□□□□ 0.06
CPNE1-227ENST00000498056 MCM7P33993 719 aa15.41■□□□□ 0.06
CPNE1-227ENST00000498056 TRAPPC10P48553 1259 aa15.41■□□□□ 0.06
CPNE1-227ENST00000498056 SETQ01105 290 aaPredicted RBP15.41■□□□□ 0.06
CPNE1-227ENST00000498056 MTMR1Q13613 665 aa15.41■□□□□ 0.06
CPNE1-227ENST00000498056 GNPTABQ3T906 1256 aa15.41■□□□□ 0.06
CPNE1-227ENST00000498056 MFSD14CQ5VZR4 134 aa15.41■□□□□ 0.06
CPNE1-227ENST00000498056 XRRA1Q6P2D8 792 aa15.41■□□□□ 0.06
CPNE1-227ENST00000498056 MAMDC4Q6UXC1 1216 aa15.41■□□□□ 0.06
CPNE1-227ENST00000498056 SEPT14Q6ZU15 432 aa15.41■□□□□ 0.06
CPNE1-227ENST00000498056 NLRX1Q86UT6 975 aa15.41■□□□□ 0.06
CPNE1-227ENST00000498056 POTEDQ86YR6 584 aa15.41■□□□□ 0.06
CPNE1-227ENST00000498056 MORC4Q8TE76 937 aa15.41■□□□□ 0.06
CPNE1-227ENST00000498056 FTOQ9C0B1 505 aaKnown RBP eCLIP15.41■□□□□ 0.06
CPNE1-227ENST00000498056 VTA1Q9NP79 307 aa15.41■□□□□ 0.06
CPNE1-227ENST00000498056 PKD2L1Q9P0L9 805 aa15.41■□□□□ 0.06
CPNE1-227ENST00000498056 PTPN22Q9Y2R2 807 aa15.41■□□□□ 0.06
CPNE1-227ENST00000498056 PCDHB6Q9Y5E3 794 aa15.41■□□□□ 0.06
CPNE1-227ENST00000498056 FAM86B1E9PN63 330 aa15.4■□□□□ 0.06
CPNE1-227ENST00000498056 EIF3JO75822 258 aaKnown RBP15.4■□□□□ 0.06
CPNE1-227ENST00000498056 STAM2O75886 525 aa15.4■□□□□ 0.06
CPNE1-227ENST00000498056 FAM86B2P0C5J1 330 aa15.4■□□□□ 0.06
CPNE1-227ENST00000498056 PRKAR2AP13861 404 aaKnown RBP15.4■□□□□ 0.06
CPNE1-227ENST00000498056 TOB1P50616 345 aaPredicted RBP15.4■□□□□ 0.06
CPNE1-227ENST00000498056 USP11P51784 963 aa15.4■□□□□ 0.06
CPNE1-227ENST00000498056 CEBPZQ03701 1054 aaKnown RBP15.4■□□□□ 0.06
CPNE1-227ENST00000498056 TRIM32Q13049 653 aa15.4■□□□□ 0.06
CPNE1-227ENST00000498056 CEP55Q53EZ4 464 aa15.4■□□□□ 0.06
CPNE1-227ENST00000498056 MOXD1Q6UVY6 613 aa15.4■□□□□ 0.06
CPNE1-227ENST00000498056 VSIG10LQ86VR7 867 aa15.4■□□□□ 0.06
CPNE1-227ENST00000498056 PLA2G4DQ86XP0 818 aa15.4■□□□□ 0.06
CPNE1-227ENST00000498056 INPP4AQ96PE3 977 aaPredicted RBP15.4■□□□□ 0.06
CPNE1-227ENST00000498056 UIMC1Q96RL1 719 aa15.4■□□□□ 0.06
CPNE1-227ENST00000498056 MXRA8Q9BRK3 442 aa15.4■□□□□ 0.06
CPNE1-227ENST00000498056 ATP6V1DQ9Y5K8 247 aa15.4■□□□□ 0.06
CPNE1-227ENST00000498056 UBIAD1Q9Y5Z9 338 aa15.4■□□□□ 0.06
CPNE1-227ENST00000498056 MRVI1Q9Y6F6 885 aa15.4■□□□□ 0.06
CPNE1-227ENST00000498056 ARID2Q68CP9 1835 aa15.4■□□□□ 0.06
CPNE1-227ENST00000498056 IGLV3-22A0A075B6J6 115 aa15.39■□□□□ 0.05
CPNE1-227ENST00000498056 FIBPO43427 364 aa15.39■□□□□ 0.05
CPNE1-227ENST00000498056 SNAI1O95863 264 aaPredicted RBP15.39■□□□□ 0.05
CPNE1-227ENST00000498056 INHAP05111 366 aa15.39■□□□□ 0.05
CPNE1-227ENST00000498056 ITGB5P18084 799 aa15.39■□□□□ 0.05
CPNE1-227ENST00000498056 GRK4P32298 578 aa15.39■□□□□ 0.05
CPNE1-227ENST00000498056 CIITAP33076 1130 aa15.39■□□□□ 0.05
CPNE1-227ENST00000498056 ZNF174Q15697 407 aa15.39■□□□□ 0.05
CPNE1-227ENST00000498056 SLC9C1Q4G0N8 1177 aa15.39■□□□□ 0.05
CPNE1-227ENST00000498056 CYP2W1Q8TAV3 490 aa15.39■□□□□ 0.05
CPNE1-227ENST00000498056 PXYLP1Q8TE99 480 aa15.39■□□□□ 0.05
CPNE1-227ENST00000498056 SH3TC2Q8TF17 1288 aa15.39■□□□□ 0.05
CPNE1-227ENST00000498056 GPRASP2Q96D09 838 aa15.39■□□□□ 0.05
CPNE1-227ENST00000498056 ZNF396Q96N95 335 aaPredicted RBP15.39■□□□□ 0.05
CPNE1-227ENST00000498056 WDR11Q9BZH6 1224 aa15.39■□□□□ 0.05
CPNE1-227ENST00000498056 ABHD16BQ9H3Z7 469 aa15.39■□□□□ 0.05
CPNE1-227ENST00000498056 CENPFP49454 3210 aa15.38■□□□□ 0.05
CPNE1-227ENST00000498056 MARCH6O60337 910 aa15.38■□□□□ 0.05
CPNE1-227ENST00000498056 RGS20O76081 388 aa15.38■□□□□ 0.05
CPNE1-227ENST00000498056 CYBAP13498 195 aa15.38■□□□□ 0.05
CPNE1-227ENST00000498056 DNM1Q05193 864 aaKnown RBP15.38■□□□□ 0.05
CPNE1-227ENST00000498056 ACVR2BQ13705 512 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms