RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 CMTR1Q8N1G2 835 aaKnown RBP17.68■□□□□ 0.42
NUP50-219ENST00000497960 KCNB2Q92953 911 aa17.68■□□□□ 0.42
NUP50-219ENST00000497960 LRCH3Q96II8 777 aa17.68■□□□□ 0.42
NUP50-219ENST00000497960 RBM28Q9NW13 759 aaKnown RBP17.68■□□□□ 0.42
NUP50-219ENST00000497960 MRVI1Q9Y6F6 885 aa17.68■□□□□ 0.42
NUP50-219ENST00000497960 ZBTB43O43298 467 aa17.67■□□□□ 0.42
NUP50-219ENST00000497960 SEC24BO95487 1268 aa17.67■□□□□ 0.42
NUP50-219ENST00000497960 CCND2P30279 289 aa17.67■□□□□ 0.42
NUP50-219ENST00000497960 FPGSQ05932 587 aa17.67■□□□□ 0.42
NUP50-219ENST00000497960 RTN1Q16799 776 aa17.67■□□□□ 0.42
NUP50-219ENST00000497960 KCNV1Q6PIU1 500 aa17.67■□□□□ 0.42
NUP50-219ENST00000497960 CCDC82Q8N4S0 544 aa17.67■□□□□ 0.42
NUP50-219ENST00000497960 SMARCC2Q8TAQ2 1214 aa17.67■□□□□ 0.42
NUP50-219ENST00000497960 JAKMIP1Q96N16 626 aaKnown RBP17.67■□□□□ 0.42
NUP50-219ENST00000497960 UPF2Q9HAU5 1272 aaKnown RBP17.67■□□□□ 0.42
NUP50-219ENST00000497960 DDX41Q9UJV9 622 aaKnown RBP17.67■□□□□ 0.42
NUP50-219ENST00000497960 LTBP2Q14767 1821 aa17.67■□□□□ 0.42
NUP50-219ENST00000497960 GRIN2DO15399 1336 aa17.67■□□□□ 0.42
NUP50-219ENST00000497960 CD4P01730 458 aa17.66■□□□□ 0.42
NUP50-219ENST00000497960 SHHQ15465 462 aa17.66■□□□□ 0.42
NUP50-219ENST00000497960 BLOC1S2Q6QNY1 142 aa17.66■□□□□ 0.42
NUP50-219ENST00000497960 AFG1LQ8WV93 481 aa17.66■□□□□ 0.42
NUP50-219ENST00000497960 BRPF3Q9ULD4 1205 aa17.66■□□□□ 0.42
NUP50-219ENST00000497960 NAP1L2Q9ULW6 460 aaPredicted RBP17.66■□□□□ 0.42
NUP50-219ENST00000497960 SNX14Q9Y5W7 946 aa17.66■□□□□ 0.42
NUP50-219ENST00000497960 KLF18A0A0U1RQI7 1052 aa17.65■□□□□ 0.42
NUP50-219ENST00000497960 PSMA5P28066 241 aa17.65■□□□□ 0.42
NUP50-219ENST00000497960 ARHGAP1Q07960 439 aa17.65■□□□□ 0.42
NUP50-219ENST00000497960 LAMC2Q13753 1193 aa17.65■□□□□ 0.42
NUP50-219ENST00000497960 MFSD5Q6N075 450 aa17.65■□□□□ 0.42
NUP50-219ENST00000497960 GPR153Q6NV75 609 aa17.65■□□□□ 0.42
NUP50-219ENST00000497960 DHX37Q8IY37 1157 aaKnown RBP17.65■□□□□ 0.42
NUP50-219ENST00000497960 TMEM199Q8N511 208 aa17.65■□□□□ 0.42
NUP50-219ENST00000497960 IL31RAQ8NI17 732 aa17.65■□□□□ 0.42
NUP50-219ENST00000497960 PPP1R12CQ9BZL4 782 aa17.65■□□□□ 0.42
NUP50-219ENST00000497960 PSTPIP2Q9H939 334 aa17.65■□□□□ 0.42
NUP50-219ENST00000497960 hCG_1642624A0A1W2PR95 340 aa17.64■□□□□ 0.41
NUP50-219ENST00000497960 GOLGA8AA7E2F4 631 aa17.64■□□□□ 0.41
NUP50-219ENST00000497960 GOLGA8BA8MQT2 603 aa17.64■□□□□ 0.41
NUP50-219ENST00000497960 PIK3CDO00329 1044 aa17.64■□□□□ 0.41
NUP50-219ENST00000497960 STAM2O75886 525 aa17.64■□□□□ 0.41
NUP50-219ENST00000497960 MMP3P08254 477 aa17.64■□□□□ 0.41
NUP50-219ENST00000497960 SUPT20HL2P0C7V6 817 aa17.64■□□□□ 0.41
NUP50-219ENST00000497960 TGFB3P10600 412 aa17.64■□□□□ 0.41
NUP50-219ENST00000497960 CASTP20810 708 aaKnown RBP17.64■□□□□ 0.41
NUP50-219ENST00000497960 RCAN1P53805 252 aa17.64■□□□□ 0.41
NUP50-219ENST00000497960 PPIGQ13427 754 aaKnown RBP eCLIP17.64■□□□□ 0.41
NUP50-219ENST00000497960 NBPF20Q3BBV1 942 aa17.64■□□□□ 0.41
NUP50-219ENST00000497960 GNPTABQ3T906 1256 aa17.64■□□□□ 0.41
NUP50-219ENST00000497960 FAM47CQ5HY64 1035 aa17.64■□□□□ 0.41
NUP50-219ENST00000497960 C9orf50Q5SZB4 431 aa17.64■□□□□ 0.41
NUP50-219ENST00000497960 USP17L6PQ6QN14 398 aa17.64■□□□□ 0.41
NUP50-219ENST00000497960 HEATR3Q7Z4Q2 680 aa17.64■□□□□ 0.41
NUP50-219ENST00000497960 EMID1Q96A84 441 aaPredicted RBP17.64■□□□□ 0.41
NUP50-219ENST00000497960 TRPV6Q9H1D0 765 aa17.64■□□□□ 0.41
NUP50-219ENST00000497960 ALDH8A1Q9H2A2 487 aaPredicted RBP17.64■□□□□ 0.41
NUP50-219ENST00000497960 HIPK3Q9H422 1215 aa17.64■□□□□ 0.41
NUP50-219ENST00000497960 KIAA1217Q5T5P2 1943 aa17.63■□□□□ 0.41
NUP50-219ENST00000497960 B4GALT4O60513 344 aa17.63■□□□□ 0.41
NUP50-219ENST00000497960 RGS20O76081 388 aa17.63■□□□□ 0.41
NUP50-219ENST00000497960 CPA1P15085 419 aa17.63■□□□□ 0.41
NUP50-219ENST00000497960 CHMP4BP1P59074 171 aa17.63■□□□□ 0.41
NUP50-219ENST00000497960 DGKDQ16760 1214 aa17.63■□□□□ 0.41
NUP50-219ENST00000497960 NFRKBQ6P4R8 1299 aa17.63■□□□□ 0.41
NUP50-219ENST00000497960 Q6ZUG5 572 aa17.63■□□□□ 0.41
NUP50-219ENST00000497960 FRMPD4Q14CM0 1322 aa17.63■□□□□ 0.41
NUP50-219ENST00000497960 CCDC196A0A1B0GTZ2 297 aa17.62■□□□□ 0.41
NUP50-219ENST00000497960 MEIS2O14770 477 aa17.62■□□□□ 0.41
NUP50-219ENST00000497960 CYP2C18P33260 490 aa17.62■□□□□ 0.41
NUP50-219ENST00000497960 EPHB4P54760 987 aa17.62■□□□□ 0.41
NUP50-219ENST00000497960 PTPN11Q06124 597 aaPredicted RBP17.62■□□□□ 0.41
NUP50-219ENST00000497960 CELF3Q5SZQ8 465 aaKnown RBP17.62■□□□□ 0.41
NUP50-219ENST00000497960 XRRA1Q6P2D8 792 aa17.62■□□□□ 0.41
NUP50-219ENST00000497960 PPTC7Q8NI37 304 aa17.62■□□□□ 0.41
NUP50-219ENST00000497960 BRF1Q92994 677 aa17.62■□□□□ 0.41
NUP50-219ENST00000497960 ZFP91Q96JP5 570 aaPredicted RBP17.62■□□□□ 0.41
NUP50-219ENST00000497960 RNPC3Q96LT9 517 aaKnown RBP17.62■□□□□ 0.41
NUP50-219ENST00000497960 TRMT13Q9NUP7 481 aaKnown RBP17.62■□□□□ 0.41
NUP50-219ENST00000497960 CNTNAP5Q8WYK1 1306 aa17.62■□□□□ 0.41
NUP50-219ENST00000497960 SCN10AQ9Y5Y9 1956 aa17.62■□□□□ 0.41
NUP50-219ENST00000497960 GGPS1O95749 300 aa17.61■□□□□ 0.41
NUP50-219ENST00000497960 UBA1P22314 1058 aaKnown RBP17.61■□□□□ 0.41
NUP50-219ENST00000497960 RPS6KB1P23443 525 aa17.61■□□□□ 0.41
NUP50-219ENST00000497960 METAP2P50579 478 aaKnown RBP eCLIP17.61■□□□□ 0.41
NUP50-219ENST00000497960 APOBRQ0VD83 1088 aa17.61■□□□□ 0.41
NUP50-219ENST00000497960 GPKOWQ92917 476 aaPredicted RBP eCLIP17.61■□□□□ 0.41
NUP50-219ENST00000497960 SPATA33Q96N06 139 aa17.61■□□□□ 0.41
NUP50-219ENST00000497960 NOC4LQ9BVI4 516 aaKnown RBP17.61■□□□□ 0.41
NUP50-219ENST00000497960 BACH2Q9BYV9 841 aa17.61■□□□□ 0.41
NUP50-219ENST00000497960 MLXIPQ9HAP2 919 aa17.61■□□□□ 0.41
NUP50-219ENST00000497960 NOD1Q9Y239 953 aa17.61■□□□□ 0.41
NUP50-219ENST00000497960 V9GY48 417 aaPredicted RBP17.61■□□□□ 0.41
NUP50-219ENST00000497960 LAMA3Q16787 3333 aa17.61■□□□□ 0.41
NUP50-219ENST00000497960 SPDYE3A6NKU9 549 aa17.6■□□□□ 0.41
NUP50-219ENST00000497960 CSF2RAP15509 400 aa17.6■□□□□ 0.41
NUP50-219ENST00000497960 NAPAP54920 295 aa17.6■□□□□ 0.41
NUP50-219ENST00000497960 ANAPC15P60006 121 aa17.6■□□□□ 0.41
NUP50-219ENST00000497960 MRPS9P82933 396 aaKnown RBP17.6■□□□□ 0.41
NUP50-219ENST00000497960 MYSM1Q5VVJ2 828 aa17.6■□□□□ 0.41
NUP50-219ENST00000497960 PCNX4Q63HM2 1172 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms