RNA–Protein interactions for RNA: ENST00000497697.5

SMTN-220, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-220ENST00000497697 DEFB123Q8N688 67 aa24.22■■□□□ 1.47
SMTN-220ENST00000497697 ZFP91Q96JP5 570 aaPredicted RBP24.22■■□□□ 1.47
SMTN-220ENST00000497697 ALDH8A1Q9H2A2 487 aaPredicted RBP24.22■■□□□ 1.47
SMTN-220ENST00000497697 SCN10AQ9Y5Y9 1956 aa24.22■■□□□ 1.47
SMTN-220ENST00000497697 LAMA2P24043 3122 aaKnown RBP24.21■■□□□ 1.47
SMTN-220ENST00000497697 CALM1P0DP23 149 aa24.21■■□□□ 1.47
SMTN-220ENST00000497697 CALM2P0DP24 149 aa24.21■■□□□ 1.47
SMTN-220ENST00000497697 CALM3P0DP25 149 aa24.21■■□□□ 1.47
SMTN-220ENST00000497697 CSF2RAP15509 400 aa24.21■■□□□ 1.47
SMTN-220ENST00000497697 NBPF20Q3BBV1 942 aa24.21■■□□□ 1.47
SMTN-220ENST00000497697 C16orf59Q7L2K0 433 aa24.21■■□□□ 1.47
SMTN-220ENST00000497697 hCG_1642624A0A1W2PR95 340 aa24.2■■□□□ 1.46
SMTN-220ENST00000497697 KPNA6O60684 536 aa24.2■■□□□ 1.46
SMTN-220ENST00000497697 MMP3P08254 477 aa24.2■■□□□ 1.46
SMTN-220ENST00000497697 DHX32Q7L7V1 743 aaKnown RBP24.2■■□□□ 1.46
SMTN-220ENST00000497697 MICU3Q86XE3 530 aa24.2■■□□□ 1.46
SMTN-220ENST00000497697 CCDC82Q8N4S0 544 aa24.2■■□□□ 1.46
SMTN-220ENST00000497697 FANCBQ8NB91 859 aa24.2■■□□□ 1.46
SMTN-220ENST00000497697 RNPC3Q96LT9 517 aaKnown RBP24.2■■□□□ 1.46
SMTN-220ENST00000497697 HIPK3Q9H422 1215 aa24.2■■□□□ 1.46
SMTN-220ENST00000497697 TRMT13Q9NUP7 481 aaKnown RBP24.2■■□□□ 1.46
SMTN-220ENST00000497697 MRVI1Q9Y6F6 885 aa24.2■■□□□ 1.46
SMTN-220ENST00000497697 NEFLP07196 543 aa24.19■■□□□ 1.46
SMTN-220ENST00000497697 TMTC3Q6ZXV5 915 aa24.19■■□□□ 1.46
SMTN-220ENST00000497697 TMEM199Q8N511 208 aa24.19■■□□□ 1.46
SMTN-220ENST00000497697 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.19■■□□□ 1.462e-7■■■■□ 26.5
SMTN-220ENST00000497697 NOC4LQ9BVI4 516 aaKnown RBP24.19■■□□□ 1.46
SMTN-220ENST00000497697 SEC63Q9UGP8 760 aaKnown RBP24.19■■□□□ 1.46
SMTN-220ENST00000497697 BRPF3Q9ULD4 1205 aa24.19■■□□□ 1.46
SMTN-220ENST00000497697 CCND2P30279 289 aa24.18■■□□□ 1.46
SMTN-220ENST00000497697 PPIGQ13427 754 aaKnown RBP eCLIP24.18■■□□□ 1.462e-8■■□□□ 13
SMTN-220ENST00000497697 APOA5Q6Q788 366 aa24.18■■□□□ 1.46
SMTN-220ENST00000497697 USP17L6PQ6QN14 398 aa24.18■■□□□ 1.46
SMTN-220ENST00000497697 GPKOWQ92917 476 aaPredicted RBP eCLIP24.18■■□□□ 1.46
SMTN-220ENST00000497697 KCNB2Q92953 911 aa24.18■■□□□ 1.46
SMTN-220ENST00000497697 FRMPD4Q14CM0 1322 aa24.17■■□□□ 1.46
SMTN-220ENST00000497697 MEIS2O14770 477 aa24.17■■□□□ 1.46
SMTN-220ENST00000497697 ACRP10323 421 aa24.17■■□□□ 1.46
SMTN-220ENST00000497697 CYP2C9P11712 490 aa24.17■■□□□ 1.46
SMTN-220ENST00000497697 CPA1P15085 419 aa24.17■■□□□ 1.46
SMTN-220ENST00000497697 CCL23P55773 120 aa24.17■■□□□ 1.46
SMTN-220ENST00000497697 KRT32Q14532 448 aa24.17■■□□□ 1.46
SMTN-220ENST00000497697 FAM47CQ5HY64 1035 aa24.17■■□□□ 1.46
SMTN-220ENST00000497697 TMEM240Q5SV17 173 aa24.17■■□□□ 1.46
SMTN-220ENST00000497697 KAT2BQ92831 832 aa24.17■■□□□ 1.46
SMTN-220ENST00000497697 EMID1Q96A84 441 aaPredicted RBP24.17■■□□□ 1.46
SMTN-220ENST00000497697 WNT8AQ9H1J5 351 aa24.17■■□□□ 1.46
SMTN-220ENST00000497697 MTMR10Q9NXD2 777 aa24.17■■□□□ 1.46
SMTN-220ENST00000497697 SORBS3O60504 671 aa24.16■■□□□ 1.46
SMTN-220ENST00000497697 MRPS9P82933 396 aaKnown RBP24.16■■□□□ 1.46
SMTN-220ENST00000497697 SP2Q02086 613 aa24.16■■□□□ 1.46
SMTN-220ENST00000497697 NFRKBQ6P4R8 1299 aa24.16■■□□□ 1.46
SMTN-220ENST00000497697 HSPA4P34932 840 aa24.15■■□□□ 1.46
SMTN-220ENST00000497697 CHMP4BP1P59074 171 aa24.15■■□□□ 1.46
SMTN-220ENST00000497697 SMAD3P84022 425 aaKnown RBP24.15■■□□□ 1.46
SMTN-220ENST00000497697 LAMC2Q13753 1193 aa24.15■■□□□ 1.46
SMTN-220ENST00000497697 FAM109BQ6ICB4 259 aaPredicted RBP24.15■■□□□ 1.46
SMTN-220ENST00000497697 SYNE3Q6ZMZ3 975 aa24.15■■□□□ 1.46
SMTN-220ENST00000497697 DHX37Q8IY37 1157 aaKnown RBP24.15■■□□□ 1.46
SMTN-220ENST00000497697 SMARCC2Q8TAQ2 1214 aa24.15■■□□□ 1.46
SMTN-220ENST00000497697 MYH7BA7E2Y1 1941 aa24.15■■□□□ 1.46
SMTN-220ENST00000497697 PIK3CDO00329 1044 aa24.14■■□□□ 1.45
SMTN-220ENST00000497697 SUPT20HL2P0C7V6 817 aa24.14■■□□□ 1.45
SMTN-220ENST00000497697 CASTP20810 708 aaKnown RBP24.14■■□□□ 1.45
SMTN-220ENST00000497697 UBA1P22314 1058 aaKnown RBP24.14■■□□□ 1.45
SMTN-220ENST00000497697 DGKDQ16760 1214 aa24.14■■□□□ 1.45
SMTN-220ENST00000497697 CELF3Q5SZQ8 465 aaKnown RBP24.14■■□□□ 1.45
SMTN-220ENST00000497697 MYSM1Q5VVJ2 828 aa24.14■■□□□ 1.45
SMTN-220ENST00000497697 KCNV1Q6PIU1 500 aa24.14■■□□□ 1.45
SMTN-220ENST00000497697 ZNF365Q70YC5 407 aa24.14■■□□□ 1.45
SMTN-220ENST00000497697 PPTC7Q8NI37 304 aa24.14■■□□□ 1.45
SMTN-220ENST00000497697 BCAS3Q9H6U6 928 aa24.14■■□□□ 1.45
SMTN-220ENST00000497697 IL23AQ9NPF7 189 aa24.14■■□□□ 1.45
SMTN-220ENST00000497697 SNX14Q9Y5W7 946 aa24.14■■□□□ 1.45
SMTN-220ENST00000497697 CNTNAP5Q8WYK1 1306 aa24.13■■□□□ 1.45
SMTN-220ENST00000497697 ZBTB43O43298 467 aa24.13■■□□□ 1.45
SMTN-220ENST00000497697 GGPS1O95749 300 aa24.13■■□□□ 1.45
SMTN-220ENST00000497697 PTPN11Q06124 597 aaPredicted RBP24.13■■□□□ 1.45
SMTN-220ENST00000497697 FUT2Q10981 343 aa24.13■■□□□ 1.45
SMTN-220ENST00000497697 CUL5Q93034 780 aa24.13■■□□□ 1.45
SMTN-220ENST00000497697 VWCEQ96DN2 955 aa24.13■■□□□ 1.45
SMTN-220ENST00000497697 SCLYQ96I15 445 aa24.13■■□□□ 1.45
SMTN-220ENST00000497697 FAM161BQ96MY7 647 aa24.13■■□□□ 1.45
SMTN-220ENST00000497697 FAM217BQ9NTX9 383 aaPredicted RBP24.13■■□□□ 1.45
SMTN-220ENST00000497697 RTEL1Q9NZ71 1219 aa24.13■■□□□ 1.45
SMTN-220ENST00000497697 KLF18A0A0U1RQI7 1052 aa24.12■■□□□ 1.45
SMTN-220ENST00000497697 HMGB1P09429 215 aaKnown RBP24.12■■□□□ 1.45
SMTN-220ENST00000497697 TGFB3P10600 412 aa24.12■■□□□ 1.45
SMTN-220ENST00000497697 SEMA3FQ13275 785 aa24.12■■□□□ 1.45
SMTN-220ENST00000497697 RTN1Q16799 776 aa24.12■■□□□ 1.45
SMTN-220ENST00000497697 HSDL1Q3SXM5 330 aa24.12■■□□□ 1.45
SMTN-220ENST00000497697 RASIP1Q5U651 963 aa24.12■■□□□ 1.45
SMTN-220ENST00000497697 JAKMIP1Q96N16 626 aaKnown RBP24.12■■□□□ 1.45
SMTN-220ENST00000497697 INPP4AQ96PE3 977 aaPredicted RBP24.12■■□□□ 1.45
SMTN-220ENST00000497697 PSTPIP2Q9H939 334 aa24.12■■□□□ 1.45
SMTN-220ENST00000497697 RBM28Q9NW13 759 aaKnown RBP24.12■■□□□ 1.45
SMTN-220ENST00000497697 ZNF286BP0CG31 522 aa24.11■■□□□ 1.45
SMTN-220ENST00000497697 HOXD8P13378 290 aaPredicted RBP24.11■■□□□ 1.45
SMTN-220ENST00000497697 CDC27P30260 824 aa24.11■■□□□ 1.45
SMTN-220ENST00000497697 UBE2SQ16763 222 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms