RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 LRRC45Q96CN5 670 aa14.37□□□□□ -0.11
GAPVD1-220ENST00000497580 SHISA4Q96DD7 197 aa14.37□□□□□ -0.11
GAPVD1-220ENST00000497580 DDX47Q9H0S4 455 aaKnown RBP14.37□□□□□ -0.11
GAPVD1-220ENST00000497580 BATF3Q9NR55 127 aa14.37□□□□□ -0.11
GAPVD1-220ENST00000497580 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.37□□□□□ -0.114e-6■■□□□ 12.1
GAPVD1-220ENST00000497580 THRAP3Q9Y2W1 955 aaKnown RBP14.37□□□□□ -0.11
GAPVD1-220ENST00000497580 NWD1Q149M9 1564 aa14.37□□□□□ -0.11
GAPVD1-220ENST00000497580 SMIM24O75264 130 aa14.37□□□□□ -0.11
GAPVD1-220ENST00000497580 PDE6AP16499 860 aa14.37□□□□□ -0.11
GAPVD1-220ENST00000497580 PDE4DQ08499 809 aa14.37□□□□□ -0.11
GAPVD1-220ENST00000497580 AKNAD1Q5T1N1 836 aa14.37□□□□□ -0.11
GAPVD1-220ENST00000497580 IFNL3Q8IZI9 196 aa14.37□□□□□ -0.11
GAPVD1-220ENST00000497580 LRRC4CQ9HCJ2 640 aa14.37□□□□□ -0.11
GAPVD1-220ENST00000497580 GGA2Q9UJY4 613 aa14.37□□□□□ -0.11
GAPVD1-220ENST00000497580 MRC1P22897 1456 aa14.36□□□□□ -0.11
GAPVD1-220ENST00000497580 SLIT1O75093 1534 aa14.36□□□□□ -0.11
GAPVD1-220ENST00000497580 PDHA1P08559 390 aa14.36□□□□□ -0.11
GAPVD1-220ENST00000497580 ASIC1P78348 528 aa14.36□□□□□ -0.11
GAPVD1-220ENST00000497580 MAGEB6Q8N7X4 407 aa14.36□□□□□ -0.11
GAPVD1-220ENST00000497580 MAB21L3Q8N8X9 362 aa14.36□□□□□ -0.11
GAPVD1-220ENST00000497580 MAGEC3Q8TD91 643 aa14.36□□□□□ -0.11
GAPVD1-220ENST00000497580 MGARPQ8TDB4 240 aa14.36□□□□□ -0.11
GAPVD1-220ENST00000497580 G3BP2Q9UN86 482 aaKnown RBP14.36□□□□□ -0.11
GAPVD1-220ENST00000497580 ATP8A1Q9Y2Q0 1164 aa14.36□□□□□ -0.11
GAPVD1-220ENST00000497580 TACC3Q9Y6A5 838 aa14.36□□□□□ -0.11
GAPVD1-220ENST00000497580 DNAJC8O75937 253 aaPredicted RBP14.36□□□□□ -0.11
GAPVD1-220ENST00000497580 MMEP08473 750 aa14.36□□□□□ -0.11
GAPVD1-220ENST00000497580 UBA7P41226 1012 aa14.36□□□□□ -0.11
GAPVD1-220ENST00000497580 CASP7P55210 303 aa14.36□□□□□ -0.11
GAPVD1-220ENST00000497580 ITIH3Q06033 890 aa14.36□□□□□ -0.11
GAPVD1-220ENST00000497580 UAP1Q16222 522 aaPredicted RBP14.36□□□□□ -0.11
GAPVD1-220ENST00000497580 ANKRD40Q6AI12 368 aa14.36□□□□□ -0.11
GAPVD1-220ENST00000497580 CCDC155Q8N6L0 562 aa14.36□□□□□ -0.11
GAPVD1-220ENST00000497580 RASGRP4Q8TDF6 673 aa14.36□□□□□ -0.11
GAPVD1-220ENST00000497580 RUBCNQ92622 972 aa14.36□□□□□ -0.11
GAPVD1-220ENST00000497580 THAP9Q9H5L6 903 aa14.36□□□□□ -0.11
GAPVD1-220ENST00000497580 LGR5O75473 907 aa14.36□□□□□ -0.11
GAPVD1-220ENST00000497580 DRD4P21917 467 aa14.36□□□□□ -0.11
GAPVD1-220ENST00000497580 RBM5P52756 815 aaKnown RBP eCLIP14.36□□□□□ -0.11
GAPVD1-220ENST00000497580 DHX9Q08211 1270 aaKnown RBP14.36□□□□□ -0.11
GAPVD1-220ENST00000497580 TAF11Q15544 211 aa14.36□□□□□ -0.11
GAPVD1-220ENST00000497580 MIS18BP1Q6P0N0 1132 aa14.36□□□□□ -0.11
GAPVD1-220ENST00000497580 LDHAL6AQ6ZMR3 332 aa14.36□□□□□ -0.11
GAPVD1-220ENST00000497580 ERICH1Q86X53 443 aa14.36□□□□□ -0.11
GAPVD1-220ENST00000497580 IFNL2Q8IZJ0 200 aa14.36□□□□□ -0.11
GAPVD1-220ENST00000497580 OSBPL1AQ9BXW6 950 aa14.36□□□□□ -0.11
GAPVD1-220ENST00000497580 NEUROG2Q9H2A3 272 aa14.36□□□□□ -0.11
GAPVD1-220ENST00000497580 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.35□□□□□ -0.11
GAPVD1-220ENST00000497580 DAPK3O43293 454 aa14.35□□□□□ -0.11
GAPVD1-220ENST00000497580 CD302Q8IX05 232 aa14.35□□□□□ -0.11
GAPVD1-220ENST00000497580 PLBD2Q8NHP8 589 aa14.35□□□□□ -0.11
GAPVD1-220ENST00000497580 TTYH3Q9C0H2 523 aa14.35□□□□□ -0.11
GAPVD1-220ENST00000497580 EPB41L4AQ9HCS5 686 aaPredicted RBP14.35□□□□□ -0.11
GAPVD1-220ENST00000497580 ABCF3Q9NUQ8 709 aa14.35□□□□□ -0.11
GAPVD1-220ENST00000497580 HSPA9P38646 679 aaKnown RBP14.35□□□□□ -0.11
GAPVD1-220ENST00000497580 XPO6Q96QU8 1125 aaKnown RBP14.35□□□□□ -0.11
GAPVD1-220ENST00000497580 PLCB1Q9NQ66 1216 aa14.35□□□□□ -0.11
GAPVD1-220ENST00000497580 F8W031 263 aaPredicted RBP14.35□□□□□ -0.11
GAPVD1-220ENST00000497580 FCER1AP12319 257 aa14.35□□□□□ -0.11
GAPVD1-220ENST00000497580 PRLRP16471 622 aa14.35□□□□□ -0.11
GAPVD1-220ENST00000497580 ADAT2Q7Z6V5 191 aaKnown RBP14.35□□□□□ -0.11
GAPVD1-220ENST00000497580 DYDC1Q8WWB3 177 aa14.35□□□□□ -0.11
GAPVD1-220ENST00000497580 PSMD1Q99460 953 aa14.35□□□□□ -0.11
GAPVD1-220ENST00000497580 KRT23Q9C075 422 aa14.35□□□□□ -0.11
GAPVD1-220ENST00000497580 PLEKHG1Q9ULL1 1385 aa14.34□□□□□ -0.11
GAPVD1-220ENST00000497580 SMIM22K7EJ46 135 aa14.34□□□□□ -0.11
GAPVD1-220ENST00000497580 PPIP5K2O43314 1243 aa14.34□□□□□ -0.11
GAPVD1-220ENST00000497580 BMP15O95972 392 aa14.34□□□□□ -0.11
GAPVD1-220ENST00000497580 CHN1P15882 459 aa14.34□□□□□ -0.11
GAPVD1-220ENST00000497580 ALDH5A1P51649 535 aaPredicted RBP14.34□□□□□ -0.11
GAPVD1-220ENST00000497580 IL17AQ16552 155 aa14.34□□□□□ -0.11
GAPVD1-220ENST00000497580 CDCA2Q69YH5 1023 aaPredicted RBP14.34□□□□□ -0.11
GAPVD1-220ENST00000497580 LRRC34Q8IZ02 419 aa14.34□□□□□ -0.11
GAPVD1-220ENST00000497580 C3orf20Q8ND61 904 aa14.34□□□□□ -0.11
GAPVD1-220ENST00000497580 KLHL29Q96CT2 875 aa14.34□□□□□ -0.11
GAPVD1-220ENST00000497580 KDM4CQ9H3R0 1056 aa14.34□□□□□ -0.11
GAPVD1-220ENST00000497580 AGAP1Q9UPQ3 857 aa14.34□□□□□ -0.11
GAPVD1-220ENST00000497580 SRCAPQ6ZRS2 3230 aa14.34□□□□□ -0.11
GAPVD1-220ENST00000497580 H7C1W4 665 aa14.34□□□□□ -0.11
GAPVD1-220ENST00000497580 IGF2BP3O00425 579 aaKnown RBP eCLIP14.34□□□□□ -0.11
GAPVD1-220ENST00000497580 TNFRSF8P28908 595 aa14.34□□□□□ -0.11
GAPVD1-220ENST00000497580 SLCO1A2P46721 670 aa14.34□□□□□ -0.11
GAPVD1-220ENST00000497580 TTI2Q6NXR4 508 aa14.34□□□□□ -0.11
GAPVD1-220ENST00000497580 SLC30A9Q6PML9 568 aa14.34□□□□□ -0.11
GAPVD1-220ENST00000497580 TSC22D3Q99576 134 aa14.34□□□□□ -0.11
GAPVD1-220ENST00000497580 EBF2Q9HAK2 575 aa14.34□□□□□ -0.11
GAPVD1-220ENST00000497580 SWAP70Q9UH65 585 aa14.34□□□□□ -0.11
GAPVD1-220ENST00000497580 ORC4O43929 436 aa14.33□□□□□ -0.11
GAPVD1-220ENST00000497580 SMNDC1O75940 238 aaKnown RBP eCLIP14.33□□□□□ -0.11
GAPVD1-220ENST00000497580 UBOX5O94941 541 aa14.33□□□□□ -0.11
GAPVD1-220ENST00000497580 GNAT1P11488 350 aa14.33□□□□□ -0.11
GAPVD1-220ENST00000497580 KLRC1P26715 233 aa14.33□□□□□ -0.11
GAPVD1-220ENST00000497580 PCK1P35558 622 aa14.33□□□□□ -0.11
GAPVD1-220ENST00000497580 CTCFP49711 727 aaPredicted RBP14.33□□□□□ -0.11
GAPVD1-220ENST00000497580 MXRA7P84157 204 aa14.33□□□□□ -0.11
GAPVD1-220ENST00000497580 ATP2C1P98194 919 aaPredicted RBP14.33□□□□□ -0.11
GAPVD1-220ENST00000497580 LACTB2Q53H82 288 aaPredicted RBP14.33□□□□□ -0.11
GAPVD1-220ENST00000497580 ZNF662Q6ZS27 426 aa14.33□□□□□ -0.11
GAPVD1-220ENST00000497580 RETREG2Q8NC44 543 aa14.33□□□□□ -0.11
GAPVD1-220ENST00000497580 DUSP9Q99956 384 aaKnown RBP14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms