RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 ABLIM1O14639 778 aa5.79□□□□□ -1.48
SMC4-225ENST00000497203 PPP1R12AO14974 1030 aaPredicted RBP5.79□□□□□ -1.48
SMC4-225ENST00000497203 MEFVO15553 781 aaPredicted RBP5.79□□□□□ -1.48
SMC4-225ENST00000497203 DLX3O60479 287 aa5.79□□□□□ -1.48
SMC4-225ENST00000497203 FUCA1P04066 466 aa5.79□□□□□ -1.48
SMC4-225ENST00000497203 LCP1P13796 627 aa5.79□□□□□ -1.48
SMC4-225ENST00000497203 EPHB3P54753 998 aa5.79□□□□□ -1.48
SMC4-225ENST00000497203 NR1I3Q14994 352 aa5.79□□□□□ -1.48
SMC4-225ENST00000497203 TESK1Q15569 626 aa5.79□□□□□ -1.48
SMC4-225ENST00000497203 ACBD5Q5T8D3 534 aaPredicted RBP5.79□□□□□ -1.48
SMC4-225ENST00000497203 E4F1Q66K89 784 aaPredicted RBP5.79□□□□□ -1.48
SMC4-225ENST00000497203 ZNF662Q6ZS27 426 aa5.79□□□□□ -1.48
SMC4-225ENST00000497203 PLEKHO2Q8TD55 490 aa5.79□□□□□ -1.48
SMC4-225ENST00000497203 DIO2Q92813 273 aa5.79□□□□□ -1.48
SMC4-225ENST00000497203 CD320Q9NPF0 282 aa5.79□□□□□ -1.48
SMC4-225ENST00000497203 BTG4Q9NY30 223 aa5.79□□□□□ -1.48
SMC4-225ENST00000497203 MARCH2Q9P0N8 246 aa5.79□□□□□ -1.48
SMC4-225ENST00000497203 PLA2G2DQ9UNK4 145 aa5.79□□□□□ -1.48
SMC4-225ENST00000497203 SMG5Q9UPR3 1016 aaKnown RBP5.79□□□□□ -1.48
SMC4-225ENST00000497203 F8W031 263 aaPredicted RBP5.78□□□□□ -1.48
SMC4-225ENST00000497203 PRODHO43272 600 aa5.78□□□□□ -1.48
SMC4-225ENST00000497203 ASMTLO95671 621 aa5.78□□□□□ -1.48
SMC4-225ENST00000497203 FGFR1P11362 822 aa5.78□□□□□ -1.48
SMC4-225ENST00000497203 MAPKAPK2P49137 400 aa5.78□□□□□ -1.48
SMC4-225ENST00000497203 CDR1P51861 262 aa5.78□□□□□ -1.48
SMC4-225ENST00000497203 TMEM62Q0P6H9 643 aa5.78□□□□□ -1.48
SMC4-225ENST00000497203 MAP4K2Q12851 820 aa5.78□□□□□ -1.48
SMC4-225ENST00000497203 KCNAB2Q13303 367 aa5.78□□□□□ -1.48
SMC4-225ENST00000497203 OLFML2BQ68BL8 750 aa5.78□□□□□ -1.48
SMC4-225ENST00000497203 IQCEQ6IPM2 695 aa5.78□□□□□ -1.48
SMC4-225ENST00000497203 TEX2Q8IWB9 1127 aa5.78□□□□□ -1.48
SMC4-225ENST00000497203 SCUBE1Q8IWY4 988 aa5.78□□□□□ -1.48
SMC4-225ENST00000497203 RCBTB1Q8NDN9 531 aa5.78□□□□□ -1.48
SMC4-225ENST00000497203 USP33Q8TEY7 942 aa5.78□□□□□ -1.48
SMC4-225ENST00000497203 KCTD13Q8WZ19 329 aa5.78□□□□□ -1.48
SMC4-225ENST00000497203 OSBP2Q969R2 916 aa5.78□□□□□ -1.48
SMC4-225ENST00000497203 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.78□□□□□ -1.48
SMC4-225ENST00000497203 FBXL7Q9UJT9 491 aa5.78□□□□□ -1.48
SMC4-225ENST00000497203 PLAAQ9Y263 795 aa5.78□□□□□ -1.48
SMC4-225ENST00000497203 TRBV23-1A0A0A0MS06 115 aa5.77□□□□□ -1.49
SMC4-225ENST00000497203 TCAF2A6NFQ2 919 aa5.77□□□□□ -1.49
SMC4-225ENST00000497203 NPIPB6E9PJ23 425 aa5.77□□□□□ -1.49
SMC4-225ENST00000497203 NTRK1P04629 796 aa5.77□□□□□ -1.49
SMC4-225ENST00000497203 PABPC1P11940 636 aaKnown RBP5.77□□□□□ -1.49
SMC4-225ENST00000497203 HSP90B1P14625 803 aaKnown RBP5.77□□□□□ -1.49
SMC4-225ENST00000497203 LTBRP36941 435 aa5.77□□□□□ -1.49
SMC4-225ENST00000497203 BCL6P41182 706 aa5.77□□□□□ -1.49
SMC4-225ENST00000497203 SUMO1P63165 101 aaKnown RBP5.77□□□□□ -1.49
SMC4-225ENST00000497203 PRR5P85299 388 aa5.77□□□□□ -1.49
SMC4-225ENST00000497203 WWC2Q6AWC2 1192 aa5.77□□□□□ -1.49
SMC4-225ENST00000497203 LILRA6Q6PI73 481 aa5.77□□□□□ -1.49
SMC4-225ENST00000497203 ZC3H14Q6PJT7 736 aaKnown RBP5.77□□□□□ -1.49
SMC4-225ENST00000497203 NSMFQ6X4W1 530 aa5.77□□□□□ -1.49
SMC4-225ENST00000497203 LCNL1Q6ZST4 164 aa5.77□□□□□ -1.49
SMC4-225ENST00000497203 CABP7Q86V35 215 aa5.77□□□□□ -1.49
SMC4-225ENST00000497203 NLRP10Q86W26 655 aa5.77□□□□□ -1.49
SMC4-225ENST00000497203 LDHDQ86WU2 507 aa5.77□□□□□ -1.49
SMC4-225ENST00000497203 TOX2Q96NM4 488 aa5.77□□□□□ -1.49
SMC4-225ENST00000497203 DHRS4Q9BTZ2 278 aa5.77□□□□□ -1.49
SMC4-225ENST00000497203 TIMM13Q9Y5L4 95 aaPredicted RBP5.77□□□□□ -1.49
SMC4-225ENST00000497203 C22orf46C9J442 243 aa5.76□□□□□ -1.49
SMC4-225ENST00000497203 PLD2O14939 933 aa5.76□□□□□ -1.49
SMC4-225ENST00000497203 N4BP3O15049 544 aa5.76□□□□□ -1.49
SMC4-225ENST00000497203 FPR2P25090 351 aa5.76□□□□□ -1.49
SMC4-225ENST00000497203 CFPP27918 469 aa5.76□□□□□ -1.49
SMC4-225ENST00000497203 NCKAP1LP55160 1127 aa5.76□□□□□ -1.49
SMC4-225ENST00000497203 RPL11P62913 178 aaKnown RBP5.76□□□□□ -1.49
SMC4-225ENST00000497203 ZNF200P98182 395 aaPredicted RBP5.76□□□□□ -1.49
SMC4-225ENST00000497203 NTRK3Q16288 839 aa5.76□□□□□ -1.49
SMC4-225ENST00000497203 KCNA10Q16322 511 aa5.76□□□□□ -1.49
SMC4-225ENST00000497203 USP53Q70EK8 1073 aa5.76□□□□□ -1.49
SMC4-225ENST00000497203 ANKLE2Q86XL3 938 aa5.76□□□□□ -1.49
SMC4-225ENST00000497203 NETO2Q8NC67 525 aa5.76□□□□□ -1.49
SMC4-225ENST00000497203 ZCRB1Q8TBF4 217 aaKnown RBP5.76□□□□□ -1.49
SMC4-225ENST00000497203 MZB1Q8WU39 189 aa5.76□□□□□ -1.49
SMC4-225ENST00000497203 KISS1RQ969F8 398 aaPredicted RBP5.76□□□□□ -1.49
SMC4-225ENST00000497203 BCAS3Q9H6U6 928 aa5.76□□□□□ -1.49
SMC4-225ENST00000497203 SPC25Q9HBM1 224 aa5.76□□□□□ -1.49
SMC4-225ENST00000497203 RAPGEFL1Q9UHV5 662 aa5.76□□□□□ -1.49
SMC4-225ENST00000497203 DBR1Q9UK59 544 aaKnown RBP5.76□□□□□ -1.49
SMC4-225ENST00000497203 MRPS23Q9Y3D9 190 aaKnown RBP5.76□□□□□ -1.49
SMC4-225ENST00000497203 SIT1Q9Y3P8 196 aa5.76□□□□□ -1.49
SMC4-225ENST00000497203 PCDHA5Q9Y5H7 936 aa5.76□□□□□ -1.49
SMC4-225ENST00000497203 PCDHA2Q9Y5H9 948 aa5.76□□□□□ -1.49
SMC4-225ENST00000497203 NPFFR2Q9Y5X5 522 aa5.76□□□□□ -1.49
SMC4-225ENST00000497203 BLACEA4D250 179 aa5.75□□□□□ -1.49
SMC4-225ENST00000497203 DNAJC6O75061 913 aa5.75□□□□□ -1.49
SMC4-225ENST00000497203 RFPL3O75679 317 aa5.75□□□□□ -1.49
SMC4-225ENST00000497203 IBSPP21815 317 aaPredicted RBP5.75□□□□□ -1.49
SMC4-225ENST00000497203 FBLN1P23142 703 aa5.75□□□□□ -1.49
SMC4-225ENST00000497203 BUD31P41223 144 aaPredicted RBP5.75□□□□□ -1.49
SMC4-225ENST00000497203 GYS2P54840 703 aa5.75□□□□□ -1.49
SMC4-225ENST00000497203 LINC00310P59036 64 aa5.75□□□□□ -1.49
SMC4-225ENST00000497203 SSPNQ14714 243 aa5.75□□□□□ -1.49
SMC4-225ENST00000497203 FNDC3BQ53EP0 1204 aaKnown RBP5.75□□□□□ -1.49
SMC4-225ENST00000497203 FAM209AQ5JX71 171 aa5.75□□□□□ -1.49
SMC4-225ENST00000497203 FOXB2Q5VYV0 432 aa5.75□□□□□ -1.49
SMC4-225ENST00000497203 CEP68Q76N32 757 aa5.75□□□□□ -1.49
SMC4-225ENST00000497203 IGDCC3Q8IVU1 814 aa5.75□□□□□ -1.49
SMC4-225ENST00000497203 ANKRD13AQ8IZ07 590 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms