RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 LGR4Q9BXB1 951 aa5.38□□□□□ -1.55
VPS26A-208ENST00000497022 ZNF408Q9H9D4 720 aa5.38□□□□□ -1.55
VPS26A-208ENST00000497022 GPRC5CQ9NQ84 441 aa5.38□□□□□ -1.55
VPS26A-208ENST00000497022 CYP26B1Q9NR63 512 aa5.38□□□□□ -1.55
VPS26A-208ENST00000497022 C7orf72A4D263 438 aa5.37□□□□□ -1.55
VPS26A-208ENST00000497022 B2RBV5 119 aa5.37□□□□□ -1.55
VPS26A-208ENST00000497022 DDAH1O94760 285 aa5.37□□□□□ -1.55
VPS26A-208ENST00000497022 SLPIP03973 132 aa5.37□□□□□ -1.55
VPS26A-208ENST00000497022 GLI4P10075 376 aa5.37□□□□□ -1.55
VPS26A-208ENST00000497022 PMLP29590 882 aa5.37□□□□□ -1.55
VPS26A-208ENST00000497022 ACVRL1P37023 503 aa5.37□□□□□ -1.55
VPS26A-208ENST00000497022 SCRN1Q12765 414 aa5.37□□□□□ -1.55
VPS26A-208ENST00000497022 CRIP3Q6Q6R5 217 aa5.37□□□□□ -1.55
VPS26A-208ENST00000497022 MCF2L2Q86YR7 1114 aa5.37□□□□□ -1.55
VPS26A-208ENST00000497022 LGI4Q8N135 537 aa5.37□□□□□ -1.55
VPS26A-208ENST00000497022 LZTR1Q8N653 840 aa5.37□□□□□ -1.55
VPS26A-208ENST00000497022 SLC43A3Q8NBI5 491 aa5.37□□□□□ -1.55
VPS26A-208ENST00000497022 MICAL1Q8TDZ2 1067 aa5.37□□□□□ -1.55
VPS26A-208ENST00000497022 ADAMTS17Q8TE56 1095 aa5.37□□□□□ -1.55
VPS26A-208ENST00000497022 MTA3Q9BTC8 594 aa5.37□□□□□ -1.55
VPS26A-208ENST00000497022 IGSF5Q9NSI5 407 aa5.37□□□□□ -1.55
VPS26A-208ENST00000497022 SPATA6Q9NWH7 488 aaPredicted RBP5.37□□□□□ -1.55
VPS26A-208ENST00000497022 CLEC1BQ9P126 229 aa5.37□□□□□ -1.55
VPS26A-208ENST00000497022 FBLN5Q9UBX5 448 aa5.37□□□□□ -1.55
VPS26A-208ENST00000497022 RWDD3Q9Y3V2 267 aa5.37□□□□□ -1.55
VPS26A-208ENST00000497022 THBDP07204 575 aa5.36□□□□□ -1.55
VPS26A-208ENST00000497022 PLS3P13797 630 aa5.36□□□□□ -1.55
VPS26A-208ENST00000497022 DNAJA1P31689 397 aaKnown RBP5.36□□□□□ -1.55
VPS26A-208ENST00000497022 CYP4F3Q08477 520 aa5.36□□□□□ -1.55
VPS26A-208ENST00000497022 KIAA2012Q0VF49 1180 aa5.36□□□□□ -1.55
VPS26A-208ENST00000497022 SLC9A5Q14940 896 aa5.36□□□□□ -1.55
VPS26A-208ENST00000497022 FXNQ16595 210 aa5.36□□□□□ -1.55
VPS26A-208ENST00000497022 SV2CQ496J9 727 aa5.36□□□□□ -1.55
VPS26A-208ENST00000497022 USP51Q70EK9 711 aa5.36□□□□□ -1.55
VPS26A-208ENST00000497022 CABP7Q86V35 215 aa5.36□□□□□ -1.55
VPS26A-208ENST00000497022 Q8N1X5 172 aa5.36□□□□□ -1.55
VPS26A-208ENST00000497022 SMARCC2Q8TAQ2 1214 aa5.36□□□□□ -1.55
VPS26A-208ENST00000497022 KISS1RQ969F8 398 aaPredicted RBP5.36□□□□□ -1.55
VPS26A-208ENST00000497022 GMLQ99445 158 aa5.36□□□□□ -1.55
VPS26A-208ENST00000497022 MMP19Q99542 508 aa5.36□□□□□ -1.55
VPS26A-208ENST00000497022 SSBP3Q9BWW4 388 aaPredicted RBP5.36□□□□□ -1.55
VPS26A-208ENST00000497022 NKX2-4Q9H2Z4 354 aa5.36□□□□□ -1.55
VPS26A-208ENST00000497022 GULP1Q9UBP9 304 aa5.36□□□□□ -1.55
VPS26A-208ENST00000497022 TSC22D4Q9Y3Q8 395 aa5.36□□□□□ -1.55
VPS26A-208ENST00000497022 SUSD5O60279 629 aa5.35□□□□□ -1.55
VPS26A-208ENST00000497022 NPHS1O60500 1241 aa5.35□□□□□ -1.55
VPS26A-208ENST00000497022 FZD7O75084 574 aa5.35□□□□□ -1.55
VPS26A-208ENST00000497022 ITGAVP06756 1048 aa5.35□□□□□ -1.55
VPS26A-208ENST00000497022 RBM10P98175 930 aaKnown RBP5.35□□□□□ -1.55
VPS26A-208ENST00000497022 CACNB2Q08289 660 aaPredicted RBP5.35□□□□□ -1.55
VPS26A-208ENST00000497022 FAM26FQ5R3K3 315 aa5.35□□□□□ -1.55
VPS26A-208ENST00000497022 MBLAC2Q68D91 279 aa5.35□□□□□ -1.55
VPS26A-208ENST00000497022 MRM1Q6IN84 353 aaKnown RBP5.35□□□□□ -1.55
VPS26A-208ENST00000497022 BORAQ6PGQ7 559 aa5.35□□□□□ -1.55
VPS26A-208ENST00000497022 LINC00482Q8N8I6 264 aa5.35□□□□□ -1.55
VPS26A-208ENST00000497022 NOX5Q96PH1 765 aa5.35□□□□□ -1.55
VPS26A-208ENST00000497022 RXFP1Q9HBX9 757 aa5.35□□□□□ -1.55
VPS26A-208ENST00000497022 PCDH18Q9HCL0 1135 aa5.35□□□□□ -1.55
VPS26A-208ENST00000497022 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.35□□□□□ -1.55
VPS26A-208ENST00000497022 NUDT5Q9UKK9 219 aa5.35□□□□□ -1.55
VPS26A-208ENST00000497022 E9PSI1 815 aa5.34□□□□□ -1.55
VPS26A-208ENST00000497022 TBX1O43435 398 aa5.34□□□□□ -1.55
VPS26A-208ENST00000497022 SMARCA5O60264 1052 aaPredicted RBP5.34□□□□□ -1.55
VPS26A-208ENST00000497022 GJB6O95452 261 aa5.34□□□□□ -1.55
VPS26A-208ENST00000497022 HOXC12P31275 282 aa5.34□□□□□ -1.55
VPS26A-208ENST00000497022 GLB1LQ6UWU2 654 aa5.34□□□□□ -1.55
VPS26A-208ENST00000497022 FAM124AQ86V42 546 aa5.34□□□□□ -1.55
VPS26A-208ENST00000497022 ZNF227Q86WZ6 799 aa5.34□□□□□ -1.55
VPS26A-208ENST00000497022 NETO2Q8NC67 525 aa5.34□□□□□ -1.55
VPS26A-208ENST00000497022 NPLOC4Q8TAT6 608 aa5.34□□□□□ -1.55
VPS26A-208ENST00000497022 SH3RF3Q8TEJ3 882 aaPredicted RBP5.34□□□□□ -1.55
VPS26A-208ENST00000497022 USP33Q8TEY7 942 aa5.34□□□□□ -1.55
VPS26A-208ENST00000497022 FRS2Q8WU20 508 aa5.34□□□□□ -1.55
VPS26A-208ENST00000497022 BTN2A2Q8WVV5 523 aa5.34□□□□□ -1.55
VPS26A-208ENST00000497022 DPF3Q92784 378 aa5.34□□□□□ -1.55
VPS26A-208ENST00000497022 ZBTB8AQ96BR9 441 aa5.34□□□□□ -1.55
VPS26A-208ENST00000497022 PEX11GQ96HA9 241 aa5.34□□□□□ -1.55
VPS26A-208ENST00000497022 CDK5RAP1Q96SZ6 601 aaKnown RBP5.34□□□□□ -1.55
VPS26A-208ENST00000497022 LRP2BPQ9P2M1 347 aa5.34□□□□□ -1.55
VPS26A-208ENST00000497022 ZBTB7AO95365 584 aa5.33□□□□□ -1.56
VPS26A-208ENST00000497022 FUCA1P04066 466 aa5.33□□□□□ -1.56
VPS26A-208ENST00000497022 INF2Q27J81 1249 aa5.33□□□□□ -1.56
VPS26A-208ENST00000497022 RGL3Q3MIN7 710 aa5.33□□□□□ -1.56
VPS26A-208ENST00000497022 SPRED1Q7Z699 444 aa5.33□□□□□ -1.56
VPS26A-208ENST00000497022 PLEKHO2Q8TD55 490 aa5.33□□□□□ -1.56
VPS26A-208ENST00000497022 PODXL2Q9NZ53 605 aa5.33□□□□□ -1.56
VPS26A-208ENST00000497022 INVSQ9Y283 1065 aa5.33□□□□□ -1.56
VPS26A-208ENST00000497022 R3HCC1Q9Y3T6 440 aaKnown RBP5.33□□□□□ -1.56
VPS26A-208ENST00000497022 ARNTLO00327 626 aa5.32□□□□□ -1.56
VPS26A-208ENST00000497022 SCG5P05408 212 aa5.32□□□□□ -1.56
VPS26A-208ENST00000497022 RPL13P26373 211 aaKnown RBP5.32□□□□□ -1.56
VPS26A-208ENST00000497022 SF1Q15637 639 aaKnown RBP5.32□□□□□ -1.56
VPS26A-208ENST00000497022 E4F1Q66K89 784 aaPredicted RBP5.32□□□□□ -1.56
VPS26A-208ENST00000497022 WWC2Q6AWC2 1192 aa5.32□□□□□ -1.56
VPS26A-208ENST00000497022 IQCEQ6IPM2 695 aa5.32□□□□□ -1.56
VPS26A-208ENST00000497022 ANKS3Q6ZW76 656 aa5.32□□□□□ -1.56
VPS26A-208ENST00000497022 EEPD1Q7L9B9 569 aa5.32□□□□□ -1.56
VPS26A-208ENST00000497022 ZFPM1Q8IX07 1006 aa5.32□□□□□ -1.56
VPS26A-208ENST00000497022 KREMEN2Q8NCW0 462 aa5.32□□□□□ -1.56
VPS26A-208ENST00000497022 HNRNPLLQ8WVV9 542 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms