RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 RXRAP19793 462 aa17.48■□□□□ 0.39
NEK4-206ENST00000496822 DNAJB2P25686 324 aa17.48■□□□□ 0.39
NEK4-206ENST00000496822 PGM5Q15124 567 aa17.48■□□□□ 0.39
NEK4-206ENST00000496822 FCHSD1Q86WN1 690 aa17.48■□□□□ 0.39
NEK4-206ENST00000496822 RAB11FIP4Q86YS3 637 aa17.48■□□□□ 0.39
NEK4-206ENST00000496822 CDX2Q99626 313 aaPredicted RBP17.48■□□□□ 0.39
NEK4-206ENST00000496822 LRRC2Q9BYS8 371 aa17.48■□□□□ 0.39
NEK4-206ENST00000496822 CXXC1Q9P0U4 656 aaPredicted RBP17.48■□□□□ 0.39
NEK4-206ENST00000496822 DDX41Q9UJV9 622 aaKnown RBP17.48■□□□□ 0.39
NEK4-206ENST00000496822 KIAA1217Q5T5P2 1943 aa17.48■□□□□ 0.39
NEK4-206ENST00000496822 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.47■□□□□ 0.39
NEK4-206ENST00000496822 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.47■□□□□ 0.39
NEK4-206ENST00000496822 GCOM1H8Y6P7 765 aaPredicted RBP17.47■□□□□ 0.39
NEK4-206ENST00000496822 KPNA6O60684 536 aa17.47■□□□□ 0.39
NEK4-206ENST00000496822 POLR2MP0CAP2 368 aa17.47■□□□□ 0.39
NEK4-206ENST00000496822 MCM5P33992 734 aa17.47■□□□□ 0.39
NEK4-206ENST00000496822 CHMP4BP1P59074 171 aa17.47■□□□□ 0.39
NEK4-206ENST00000496822 NFRKBQ6P4R8 1299 aa17.47■□□□□ 0.39
NEK4-206ENST00000496822 SLC17A8Q8NDX2 589 aa17.47■□□□□ 0.39
NEK4-206ENST00000496822 CTCFLQ8NI51 663 aaPredicted RBP17.47■□□□□ 0.39
NEK4-206ENST00000496822 KAT2BQ92831 832 aa17.47■□□□□ 0.39
NEK4-206ENST00000496822 TMEM87BQ96K49 555 aa17.47■□□□□ 0.39
NEK4-206ENST00000496822 MAP3K14Q99558 947 aa17.47■□□□□ 0.39
NEK4-206ENST00000496822 MTA3Q9BTC8 594 aa17.47■□□□□ 0.39
NEK4-206ENST00000496822 SPZ1Q9BXG8 430 aa17.47■□□□□ 0.39
NEK4-206ENST00000496822 MAP3K20Q9NYL2 800 aaKnown RBP17.47■□□□□ 0.39
NEK4-206ENST00000496822 MRVI1Q9Y6F6 885 aa17.47■□□□□ 0.39
NEK4-206ENST00000496822 BAZ2BQ9UIF8 2168 aaKnown RBP17.47■□□□□ 0.39
NEK4-206ENST00000496822 SORBS3O60504 671 aa17.46■□□□□ 0.39
NEK4-206ENST00000496822 SUPT20HL2P0C7V6 817 aa17.46■□□□□ 0.39
NEK4-206ENST00000496822 PBX2P40425 430 aa17.46■□□□□ 0.39
NEK4-206ENST00000496822 NFXL1Q6ZNB6 911 aa17.46■□□□□ 0.39
NEK4-206ENST00000496822 VSIG10LQ86VR7 867 aa17.46■□□□□ 0.39
NEK4-206ENST00000496822 CMTR1Q8N1G2 835 aaKnown RBP17.46■□□□□ 0.39
NEK4-206ENST00000496822 SRBD1Q8N5C6 995 aaKnown RBP17.46■□□□□ 0.39
NEK4-206ENST00000496822 MYLIPQ8WY64 445 aa17.46■□□□□ 0.39
NEK4-206ENST00000496822 HERVK_113Q902F9 699 aa17.46■□□□□ 0.39
NEK4-206ENST00000496822 GPKOWQ92917 476 aaPredicted RBP eCLIP17.46■□□□□ 0.39
NEK4-206ENST00000496822 FRMPD4Q14CM0 1322 aa17.46■□□□□ 0.38
NEK4-206ENST00000496822 CCDC69A6NI79 296 aa17.45■□□□□ 0.38
NEK4-206ENST00000496822 KIF5BP33176 963 aa17.45■□□□□ 0.38
NEK4-206ENST00000496822 TRAF1Q13077 416 aa17.45■□□□□ 0.38
NEK4-206ENST00000496822 OTOP2Q7RTS6 562 aa17.45■□□□□ 0.38
NEK4-206ENST00000496822 SAMD3Q8N6K7 520 aa17.45■□□□□ 0.38
NEK4-206ENST00000496822 EMID1Q96A84 441 aaPredicted RBP17.45■□□□□ 0.38
NEK4-206ENST00000496822 CTAGE1Q96RT6 745 aa17.45■□□□□ 0.38
NEK4-206ENST00000496822 PBX4Q9BYU1 374 aa17.45■□□□□ 0.38
NEK4-206ENST00000496822 TMEM265A0A087WTH1 108 aa17.44■□□□□ 0.38
NEK4-206ENST00000496822 FGBP02675 491 aa17.44■□□□□ 0.38
NEK4-206ENST00000496822 ZNF286BP0CG31 522 aa17.44■□□□□ 0.38
NEK4-206ENST00000496822 UBA1P22314 1058 aaKnown RBP17.44■□□□□ 0.38
NEK4-206ENST00000496822 CCND2P30279 289 aa17.44■□□□□ 0.38
NEK4-206ENST00000496822 SP2Q02086 613 aa17.44■□□□□ 0.38
NEK4-206ENST00000496822 PTPN11Q06124 597 aaPredicted RBP17.44■□□□□ 0.38
NEK4-206ENST00000496822 DHX37Q8IY37 1157 aaKnown RBP17.44■□□□□ 0.38
NEK4-206ENST00000496822 PPTC7Q8NI37 304 aa17.44■□□□□ 0.38
NEK4-206ENST00000496822 RRP36Q96EU6 259 aaKnown RBP17.44■□□□□ 0.38
NEK4-206ENST00000496822 EYSQ5T1H1 3165 aa17.43■□□□□ 0.38
NEK4-206ENST00000496822 hCG_1642624A0A1W2PR95 340 aa17.43■□□□□ 0.38
NEK4-206ENST00000496822 RBAK-RBAKDNI3L0D1 243 aa17.43■□□□□ 0.38
NEK4-206ENST00000496822 GGPS1O95749 300 aa17.43■□□□□ 0.38
NEK4-206ENST00000496822 CASTP20810 708 aaKnown RBP17.43■□□□□ 0.38
NEK4-206ENST00000496822 LIFRP42702 1097 aa17.43■□□□□ 0.38
NEK4-206ENST00000496822 MRPS9P82933 396 aaKnown RBP17.43■□□□□ 0.38
NEK4-206ENST00000496822 GRIN2CQ14957 1233 aa17.43■□□□□ 0.38
NEK4-206ENST00000496822 DGKDQ16760 1214 aa17.43■□□□□ 0.38
NEK4-206ENST00000496822 HSDL1Q3SXM5 330 aa17.43■□□□□ 0.38
NEK4-206ENST00000496822 ERICH6BQ5W0A0 696 aa17.43■□□□□ 0.38
NEK4-206ENST00000496822 GDF6Q6KF10 455 aaPredicted RBP17.43■□□□□ 0.38
NEK4-206ENST00000496822 TMTC2Q8N394 836 aa17.43■□□□□ 0.38
NEK4-206ENST00000496822 TIFAQ96CG3 184 aa17.43■□□□□ 0.38
NEK4-206ENST00000496822 TCEANC2Q96MN5 208 aa17.43■□□□□ 0.38
NEK4-206ENST00000496822 BCAS3Q9H6U6 928 aa17.43■□□□□ 0.38
NEK4-206ENST00000496822 TANC1Q9C0D5 1861 aa17.43■□□□□ 0.38
NEK4-206ENST00000496822 CDC45O75419 566 aa17.42■□□□□ 0.38
NEK4-206ENST00000496822 F2P00734 622 aa17.42■□□□□ 0.38
NEK4-206ENST00000496822 HOXD8P13378 290 aaPredicted RBP17.42■□□□□ 0.38
NEK4-206ENST00000496822 SMARCA1P28370 1054 aa17.42■□□□□ 0.38
NEK4-206ENST00000496822 LAMC2Q13753 1193 aa17.42■□□□□ 0.38
NEK4-206ENST00000496822 PTGISQ16647 500 aa17.42■□□□□ 0.38
NEK4-206ENST00000496822 CELF3Q5SZQ8 465 aaKnown RBP17.42■□□□□ 0.38
NEK4-206ENST00000496822 MYSM1Q5VVJ2 828 aa17.42■□□□□ 0.38
NEK4-206ENST00000496822 USP17L6PQ6QN14 398 aa17.42■□□□□ 0.38
NEK4-206ENST00000496822 DEFB128Q7Z7B8 93 aa17.42■□□□□ 0.38
NEK4-206ENST00000496822 SESTD1Q86VW0 696 aa17.42■□□□□ 0.38
NEK4-206ENST00000496822 MICU3Q86XE3 530 aa17.42■□□□□ 0.38
NEK4-206ENST00000496822 RASEFQ8IZ41 740 aa17.42■□□□□ 0.38
NEK4-206ENST00000496822 DHX38Q92620 1227 aaKnown RBP17.42■□□□□ 0.38
NEK4-206ENST00000496822 SPATA33Q96N06 139 aa17.42■□□□□ 0.38
NEK4-206ENST00000496822 LZTS2Q9BRK4 669 aa17.42■□□□□ 0.38
NEK4-206ENST00000496822 ALG1Q9BT22 464 aa17.42■□□□□ 0.38
NEK4-206ENST00000496822 SEC63Q9UGP8 760 aaKnown RBP17.42■□□□□ 0.38
NEK4-206ENST00000496822 NOD1Q9Y239 953 aa17.42■□□□□ 0.38
NEK4-206ENST00000496822 SLC12A7Q9Y666 1083 aa17.42■□□□□ 0.38
NEK4-206ENST00000496822 HAS3O00219 553 aa17.41■□□□□ 0.38
NEK4-206ENST00000496822 PITPNM1O00562 1244 aa17.41■□□□□ 0.38
NEK4-206ENST00000496822 MEIS2O14770 477 aa17.41■□□□□ 0.38
NEK4-206ENST00000496822 PSEN2P49810 448 aa17.41■□□□□ 0.38
NEK4-206ENST00000496822 GNAQP50148 359 aa17.41■□□□□ 0.38
NEK4-206ENST00000496822 SEMA3FQ13275 785 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms