RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 RESTQ13127 1097 aa24.77■■□□□ 1.56
C9orf3-222ENST00000496567 MFSD14CQ5VZR4 134 aa24.77■■□□□ 1.56
C9orf3-222ENST00000496567 MYH7BA7E2Y1 1941 aa24.77■■□□□ 1.56
C9orf3-222ENST00000496567 F13A1P00488 732 aa24.76■■□□□ 1.55
C9orf3-222ENST00000496567 TRAPPC10P48553 1259 aa24.76■■□□□ 1.55
C9orf3-222ENST00000496567 SLAIN1Q8ND83 568 aa24.76■■□□□ 1.55
C9orf3-222ENST00000496567 TRIB2Q92519 343 aa24.76■■□□□ 1.55
C9orf3-222ENST00000496567 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.76■■□□□ 1.55
C9orf3-222ENST00000496567 CNPY2Q9Y2B0 182 aa24.76■■□□□ 1.55
C9orf3-222ENST00000496567 IGHA2P01877 340 aa24.76■■□□□ 1.55
C9orf3-222ENST00000496567 MRPS9P82933 396 aaKnown RBP24.76■■□□□ 1.55
C9orf3-222ENST00000496567 PKN2Q16513 984 aaKnown RBP24.76■■□□□ 1.55
C9orf3-222ENST00000496567 LETM2Q2VYF4 491 aa24.76■■□□□ 1.55
C9orf3-222ENST00000496567 RILPL1Q5EBL4 403 aa24.76■■□□□ 1.55
C9orf3-222ENST00000496567 PTCH2Q9Y6C5 1203 aa24.76■■□□□ 1.55
C9orf3-222ENST00000496567 SNAI1O95863 264 aaPredicted RBP24.75■■□□□ 1.55
C9orf3-222ENST00000496567 CIITAP33076 1130 aa24.75■■□□□ 1.55
C9orf3-222ENST00000496567 FOXD4L5Q5VV16 416 aaPredicted RBP24.75■■□□□ 1.55
C9orf3-222ENST00000496567 MOXD1Q6UVY6 613 aa24.75■■□□□ 1.55
C9orf3-222ENST00000496567 FOXD4L4Q8WXT5 416 aaPredicted RBP24.75■■□□□ 1.55
C9orf3-222ENST00000496567 ABHD16BQ9H3Z7 469 aa24.75■■□□□ 1.55
C9orf3-222ENST00000496567 VTA1Q9NP79 307 aa24.75■■□□□ 1.55
C9orf3-222ENST00000496567 DDX49Q9Y6V7 483 aaKnown RBP24.75■■□□□ 1.55
C9orf3-222ENST00000496567 HMGCRP04035 888 aa24.74■■□□□ 1.55
C9orf3-222ENST00000496567 GCFC2P16383 781 aaKnown RBP24.74■■□□□ 1.55
C9orf3-222ENST00000496567 GRK4P32298 578 aa24.74■■□□□ 1.55
C9orf3-222ENST00000496567 CYP2C19P33261 490 aa24.74■■□□□ 1.55
C9orf3-222ENST00000496567 GNPTABQ3T906 1256 aa24.74■■□□□ 1.55
C9orf3-222ENST00000496567 CEP55Q53EZ4 464 aa24.74■■□□□ 1.55
C9orf3-222ENST00000496567 MYSM1Q5VVJ2 828 aa24.74■■□□□ 1.55
C9orf3-222ENST00000496567 NLRX1Q86UT6 975 aa24.74■■□□□ 1.55
C9orf3-222ENST00000496567 RTEL1Q9NZ71 1219 aa24.74■■□□□ 1.55
C9orf3-222ENST00000496567 NRBP1Q9UHY1 535 aa24.74■■□□□ 1.55
C9orf3-222ENST00000496567 ZDHHC9Q9Y397 364 aa24.74■■□□□ 1.55
C9orf3-222ENST00000496567 UBIAD1Q9Y5Z9 338 aa24.74■■□□□ 1.55
C9orf3-222ENST00000496567 CYP3A7-CYP3A51PA0A087WV96 503 aa24.73■■□□□ 1.55
C9orf3-222ENST00000496567 CCNT1O60563 726 aaKnown RBP24.73■■□□□ 1.55
C9orf3-222ENST00000496567 ELNP15502 786 aa24.73■■□□□ 1.55
C9orf3-222ENST00000496567 CYP3A7P24462 503 aa24.73■■□□□ 1.55
C9orf3-222ENST00000496567 PPP4R3AQ6IN85 833 aa24.73■■□□□ 1.55
C9orf3-222ENST00000496567 INPP4AQ96PE3 977 aaPredicted RBP24.73■■□□□ 1.55
C9orf3-222ENST00000496567 MXRA8Q9BRK3 442 aa24.73■■□□□ 1.55
C9orf3-222ENST00000496567 CHMP5Q9NZZ3 219 aa24.73■■□□□ 1.55
C9orf3-222ENST00000496567 MCM3APO60318 1980 aa24.72■■□□□ 1.55
C9orf3-222ENST00000496567 LRRC37A2A6NM11 1700 aa24.72■■□□□ 1.55
C9orf3-222ENST00000496567 ATP2B1P20020 1258 aa24.72■■□□□ 1.55
C9orf3-222ENST00000496567 EEPD1Q7L9B9 569 aa24.72■■□□□ 1.55
C9orf3-222ENST00000496567 NIPA1Q7RTP0 329 aa24.72■■□□□ 1.55
C9orf3-222ENST00000496567 ATP6V1DQ9Y5K8 247 aa24.72■■□□□ 1.55
C9orf3-222ENST00000496567 MAFGO15525 162 aa24.71■■□□□ 1.55
C9orf3-222ENST00000496567 EDIL3O43854 480 aa24.71■■□□□ 1.55
C9orf3-222ENST00000496567 ACVR2BQ13705 512 aa24.71■■□□□ 1.55
C9orf3-222ENST00000496567 TTC38Q5R3I4 469 aa24.71■■□□□ 1.55
C9orf3-222ENST00000496567 FBXO46Q6PJ61 603 aaPredicted RBP24.71■■□□□ 1.55
C9orf3-222ENST00000496567 FBXO16Q8IX29 292 aaPredicted RBP24.71■■□□□ 1.55
C9orf3-222ENST00000496567 GPRASP2Q96D09 838 aa24.71■■□□□ 1.55
C9orf3-222ENST00000496567 ZFP91Q96JP5 570 aaPredicted RBP24.71■■□□□ 1.55
C9orf3-222ENST00000496567 CDHR1Q96JP9 859 aa24.71■■□□□ 1.55
C9orf3-222ENST00000496567 JADE2Q9NQC1 790 aa24.71■■□□□ 1.55
C9orf3-222ENST00000496567 FAM86B1E9PN63 330 aa24.71■■□□□ 1.55
C9orf3-222ENST00000496567 MEIS1O00470 390 aa24.71■■□□□ 1.55
C9orf3-222ENST00000496567 FAM86B2P0C5J1 330 aa24.71■■□□□ 1.55
C9orf3-222ENST00000496567 ITGB5P18084 799 aa24.71■■□□□ 1.55
C9orf3-222ENST00000496567 TOB1P50616 345 aaPredicted RBP24.71■■□□□ 1.55
C9orf3-222ENST00000496567 SETQ01105 290 aaPredicted RBP24.71■■□□□ 1.55
C9orf3-222ENST00000496567 ORC2Q13416 577 aaPredicted RBP24.71■■□□□ 1.55
C9orf3-222ENST00000496567 TDP2O95551 362 aa24.7■■□□□ 1.54
C9orf3-222ENST00000496567 MTMR1Q13613 665 aa24.7■■□□□ 1.54
C9orf3-222ENST00000496567 Q4G0T1 1027 aa24.7■■□□□ 1.54
C9orf3-222ENST00000496567 PRR16Q569H4 304 aa24.7■■□□□ 1.54
C9orf3-222ENST00000496567 KCNV1Q6PIU1 500 aa24.7■■□□□ 1.54
C9orf3-222ENST00000496567 SEPT14Q6ZU15 432 aa24.7■■□□□ 1.54
C9orf3-222ENST00000496567 PLA2G4DQ86XP0 818 aa24.7■■□□□ 1.54
C9orf3-222ENST00000496567 MBOAT7Q96N66 472 aa24.7■■□□□ 1.54
C9orf3-222ENST00000496567 KATNBL1Q9H079 304 aa24.7■■□□□ 1.54
C9orf3-222ENST00000496567 DDX25Q9UHL0 483 aaKnown RBP24.7■■□□□ 1.54
C9orf3-222ENST00000496567 ZHX1Q9UKY1 873 aaPredicted RBP24.7■■□□□ 1.54
C9orf3-222ENST00000496567 IGLV3-22A0A075B6J6 115 aa24.69■■□□□ 1.54
C9orf3-222ENST00000496567 FIBPO43427 364 aa24.69■■□□□ 1.54
C9orf3-222ENST00000496567 RGS20O76081 388 aa24.69■■□□□ 1.54
C9orf3-222ENST00000496567 CYP2W1Q8TAV3 490 aa24.69■■□□□ 1.54
C9orf3-222ENST00000496567 SCFD2Q8WU76 684 aa24.69■■□□□ 1.54
C9orf3-222ENST00000496567 WDR11Q9BZH6 1224 aa24.69■■□□□ 1.54
C9orf3-222ENST00000496567 TGFB3P10600 412 aa24.68■■□□□ 1.54
C9orf3-222ENST00000496567 ICAM3P32942 547 aa24.68■■□□□ 1.54
C9orf3-222ENST00000496567 CACNB2Q08289 660 aaPredicted RBP24.68■■□□□ 1.54
C9orf3-222ENST00000496567 SLC9C1Q4G0N8 1177 aa24.68■■□□□ 1.54
C9orf3-222ENST00000496567 PRAMEF19Q5SWL8 479 aa24.68■■□□□ 1.54
C9orf3-222ENST00000496567 TAPT1Q6NXT6 567 aa24.68■■□□□ 1.54
C9orf3-222ENST00000496567 ZNF396Q96N95 335 aaPredicted RBP24.68■■□□□ 1.54
C9orf3-222ENST00000496567 MRVI1Q9Y6F6 885 aa24.68■■□□□ 1.54
C9orf3-222ENST00000496567 KIAA1217Q5T5P2 1943 aa24.68■■□□□ 1.54
C9orf3-222ENST00000496567 RBM47A0AV96 593 aaKnown RBP24.67■■□□□ 1.54
C9orf3-222ENST00000496567 INHAP05111 366 aa24.67■■□□□ 1.54
C9orf3-222ENST00000496567 ZNF865P0CJ78 1059 aaPredicted RBP24.67■■□□□ 1.54
C9orf3-222ENST00000496567 CYBAP13498 195 aa24.67■■□□□ 1.54
C9orf3-222ENST00000496567 PRKAR2AP13861 404 aaKnown RBP24.67■■□□□ 1.54
C9orf3-222ENST00000496567 MCM7P33993 719 aa24.67■■□□□ 1.54
C9orf3-222ENST00000496567 TTLL4Q14679 1199 aa24.67■■□□□ 1.54
C9orf3-222ENST00000496567 ZNF174Q15697 407 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms