RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 MCM10Q7L590 875 aa8.91□□□□□ -0.98
CRNKL1-205ENST00000496549 ANKRD42Q8N9B4 389 aa8.91□□□□□ -0.98
CRNKL1-205ENST00000496549 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.91□□□□□ -0.98
CRNKL1-205ENST00000496549 PHACTR3Q96KR7 559 aa8.91□□□□□ -0.98
CRNKL1-205ENST00000496549 DCLRE1BQ9H816 532 aa8.91□□□□□ -0.98
CRNKL1-205ENST00000496549 BARX2Q9UMQ3 279 aaPredicted RBP8.91□□□□□ -0.98
CRNKL1-205ENST00000496549 CARMIL3Q8ND23 1372 aa8.91□□□□□ -0.98
CRNKL1-205ENST00000496549 ABCC1P33527 1531 aa8.91□□□□□ -0.98
CRNKL1-205ENST00000496549 RFC1P35251 1148 aaPredicted RBP8.91□□□□□ -0.98
CRNKL1-205ENST00000496549 CARSP49589 748 aaKnown RBP8.91□□□□□ -0.98
CRNKL1-205ENST00000496549 GNAQP50148 359 aa8.91□□□□□ -0.98
CRNKL1-205ENST00000496549 ZCWPW2Q504Y3 356 aa8.91□□□□□ -0.98
CRNKL1-205ENST00000496549 SFMBT2Q5VUG0 894 aa8.91□□□□□ -0.98
CRNKL1-205ENST00000496549 TMEM132EQ6IEE7 984 aa8.91□□□□□ -0.98
CRNKL1-205ENST00000496549 EXOC8Q8IYI6 725 aa8.91□□□□□ -0.98
CRNKL1-205ENST00000496549 ZNF274Q96GC6 653 aaPredicted RBP8.91□□□□□ -0.98
CRNKL1-205ENST00000496549 L3MBTL3Q96JM7 780 aaPredicted RBP8.91□□□□□ -0.98
CRNKL1-205ENST00000496549 CCDC77Q9BR77 488 aa8.91□□□□□ -0.98
CRNKL1-205ENST00000496549 UBE2OQ9C0C9 1292 aaKnown RBP8.91□□□□□ -0.98
CRNKL1-205ENST00000496549 Q9H521 79 aa8.91□□□□□ -0.98
CRNKL1-205ENST00000496549 RIMS2Q9UQ26 1411 aa8.91□□□□□ -0.98
CRNKL1-205ENST00000496549 FANCGO15287 622 aa8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 PPIP5K2O43314 1243 aa8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 ATP9AO75110 1047 aa8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 FGFR1OPO95684 399 aaKnown RBP8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 BAG2O95816 211 aa8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 UBTFL6P0CB48 400 aaPredicted RBP8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 S100A1P23297 94 aa8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 ADAM9Q13443 819 aa8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 BYSLQ13895 437 aaKnown RBP8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 MCMDC2Q4G0Z9 681 aa8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 POTEEQ6S8J3 1075 aa8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 FAM129AQ9BZQ8 928 aa8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 GGT7Q9UJ14 662 aa8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 WFS1O76024 890 aa8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 CHN1P15882 459 aa8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 HSPA9P38646 679 aaKnown RBP8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 DNM2P50570 870 aa8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 FXR1P51114 621 aaKnown RBP eCLIP8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 KCNJ2P63252 427 aa8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 AMPD2Q01433 879 aa8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 RPS6KA1Q15418 735 aa8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 SLC9C2Q5TAH2 1124 aa8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 SULT6B1Q6IMI4 303 aa8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 GET4Q7L5D6 327 aaPredicted RBP8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 SPICE1Q8N0Z3 855 aa8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 ZNF280CQ8ND82 737 aa8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 CXorf38Q8TB03 319 aa8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 PI4K2BQ8TCG2 481 aa8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 SH3GL1Q99961 368 aa8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 NDST4Q9H3R1 872 aa8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 PFDN4Q9NQP4 134 aa8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 TRIM10Q9UDY6 481 aa8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 IQSEC3Q9UPP2 1182 aaPredicted RBP8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 SCINQ9Y6U3 715 aa8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 RICTORQ6R327 1708 aa8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 NDC80O14777 642 aa8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 MAPK13O15264 365 aa8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 LGR5O75473 907 aa8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 DCTN3O75935 186 aa8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 BAG3O95817 575 aa8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 MORC3Q14149 939 aa8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 USH1GQ495M9 461 aa8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 TRIM50Q86XT4 487 aa8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 C1orf131Q8NDD1 294 aaKnown RBP8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 SSH3Q8TE77 659 aa8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 PRPF31Q8WWY3 499 aaKnown RBP8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 MKL1Q969V6 931 aa8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 TRIM31Q9BZY9 425 aa8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 ZNF180Q9UJW8 692 aa8.9□□□□□ -0.98
CRNKL1-205ENST00000496549 PASKQ96RG2 1323 aa8.9□□□□□ -0.99
CRNKL1-205ENST00000496549 PTPRMP28827 1452 aa8.9□□□□□ -0.99
CRNKL1-205ENST00000496549 TRIM43BA6NCK2 446 aa8.9□□□□□ -0.99
CRNKL1-205ENST00000496549 ZNF233A6NK53 670 aa8.9□□□□□ -0.99
CRNKL1-205ENST00000496549 STK10O94804 968 aaKnown RBP8.9□□□□□ -0.99
CRNKL1-205ENST00000496549 BMP15O95972 392 aa8.9□□□□□ -0.99
CRNKL1-205ENST00000496549 METAP2P50579 478 aaKnown RBP eCLIP8.9□□□□□ -0.99
CRNKL1-205ENST00000496549 RNASELQ05823 741 aaKnown RBP8.9□□□□□ -0.99
CRNKL1-205ENST00000496549 PPARAQ07869 468 aa8.9□□□□□ -0.99
CRNKL1-205ENST00000496549 TBL3Q12788 808 aaKnown RBP8.9□□□□□ -0.99
CRNKL1-205ENST00000496549 C6orf118Q5T5N4 469 aa8.9□□□□□ -0.99
CRNKL1-205ENST00000496549 WDR78Q5VTH9 848 aa8.9□□□□□ -0.99
CRNKL1-205ENST00000496549 VPS36Q86VN1 386 aa8.9□□□□□ -0.99
CRNKL1-205ENST00000496549 SCYL3Q8IZE3 742 aa8.9□□□□□ -0.99
CRNKL1-205ENST00000496549 MYOCDQ8IZQ8 938 aa8.9□□□□□ -0.99
CRNKL1-205ENST00000496549 PIP4K2CQ8TBX8 421 aa8.9□□□□□ -0.99
CRNKL1-205ENST00000496549 LRWD1Q9UFC0 647 aa8.9□□□□□ -0.99
CRNKL1-205ENST00000496549 MINK1Q8N4C8 1332 aaPredicted RBP8.89□□□□□ -0.99
CRNKL1-205ENST00000496549 GSTTP1A0A1W2PQM5 241 aa8.89□□□□□ -0.99
CRNKL1-205ENST00000496549 PALM3A6NDB9 673 aaPredicted RBP8.89□□□□□ -0.99
CRNKL1-205ENST00000496549 MOCS3O95396 460 aa8.89□□□□□ -0.99
CRNKL1-205ENST00000496549 VPS41P49754 854 aa8.89□□□□□ -0.99
CRNKL1-205ENST00000496549 DCTN2Q13561 401 aaKnown RBP8.89□□□□□ -0.99
CRNKL1-205ENST00000496549 MYBPC2Q14324 1141 aa8.89□□□□□ -0.99
CRNKL1-205ENST00000496549 ZNF449Q6P9G9 518 aa8.89□□□□□ -0.99
CRNKL1-205ENST00000496549 VPS37DQ86XT2 251 aa8.89□□□□□ -0.99
CRNKL1-205ENST00000496549 FAM186BQ8IYM0 893 aa8.89□□□□□ -0.99
CRNKL1-205ENST00000496549 FAM133AQ8N9E0 248 aa8.89□□□□□ -0.99
CRNKL1-205ENST00000496549 NEK9Q8TD19 979 aa8.89□□□□□ -0.99
CRNKL1-205ENST00000496549 MPP4Q96JB8 637 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms