RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 PHF20Q9BVI0 1012 aa8.77□□□□□ -1.01
SF3B1-212ENST00000496458 AP5M1Q9H0R1 490 aa8.77□□□□□ -1.01
SF3B1-212ENST00000496458 BLACEA4D250 179 aa8.76□□□□□ -1.01
SF3B1-212ENST00000496458 ADCY3O60266 1144 aa8.76□□□□□ -1.01
SF3B1-212ENST00000496458 ASGR2P07307 311 aa8.76□□□□□ -1.01
SF3B1-212ENST00000496458 PMLP29590 882 aa8.76□□□□□ -1.01
SF3B1-212ENST00000496458 MC3RP41968 323 aa8.76□□□□□ -1.01
SF3B1-212ENST00000496458 LIMS1P48059 325 aa8.76□□□□□ -1.01
SF3B1-212ENST00000496458 SLC9A5Q14940 896 aa8.76□□□□□ -1.01
SF3B1-212ENST00000496458 NTRK3Q16288 839 aa8.76□□□□□ -1.01
SF3B1-212ENST00000496458 SOGA3Q5TF21 947 aa8.76□□□□□ -1.01
SF3B1-212ENST00000496458 MROH9Q5TGP6 573 aa8.76□□□□□ -1.01
SF3B1-212ENST00000496458 SRPK1Q96SB4 655 aaKnown RBP8.76□□□□□ -1.01
SF3B1-212ENST00000496458 EPB41L4AQ9HCS5 686 aaPredicted RBP8.76□□□□□ -1.01
SF3B1-212ENST00000496458 GPR27Q9NS67 375 aa8.76□□□□□ -1.01
SF3B1-212ENST00000496458 CLDND1Q9NY35 253 aa8.76□□□□□ -1.01
SF3B1-212ENST00000496458 COA3Q9Y2R0 106 aaPredicted RBP8.76□□□□□ -1.01
SF3B1-212ENST00000496458 X6R8D5 127 aa8.76□□□□□ -1.01
SF3B1-212ENST00000496458 MSCO60682 206 aa8.75□□□□□ -1.01
SF3B1-212ENST00000496458 ZBTB7AO95365 584 aa8.75□□□□□ -1.01
SF3B1-212ENST00000496458 ZSCAN22P10073 491 aaPredicted RBP8.75□□□□□ -1.01
SF3B1-212ENST00000496458 IGFBP6P24592 240 aaPredicted RBP8.75□□□□□ -1.01
SF3B1-212ENST00000496458 CNKSR3Q6P9H4 555 aa8.75□□□□□ -1.01
SF3B1-212ENST00000496458 KCNT2Q6UVM3 1135 aa8.75□□□□□ -1.01
SF3B1-212ENST00000496458 LCNL1Q6ZST4 164 aa8.75□□□□□ -1.01
SF3B1-212ENST00000496458 FAM129CQ86XR2 697 aa8.75□□□□□ -1.01
SF3B1-212ENST00000496458 RIOX2Q8IUF8 465 aa8.75□□□□□ -1.01
SF3B1-212ENST00000496458 CDC6Q99741 560 aa8.75□□□□□ -1.01
SF3B1-212ENST00000496458 RNF38Q9H0F5 515 aa8.75□□□□□ -1.01
SF3B1-212ENST00000496458 FAN1Q9Y2M0 1017 aa8.75□□□□□ -1.01
SF3B1-212ENST00000496458 H7BY64 318 aa8.74□□□□□ -1.01
SF3B1-212ENST00000496458 SGSM2O43147 1006 aa8.74□□□□□ -1.01
SF3B1-212ENST00000496458 NCAM1P13591 858 aa8.74□□□□□ -1.01
SF3B1-212ENST00000496458 ATF2P15336 505 aa8.74□□□□□ -1.01
SF3B1-212ENST00000496458 DCAF4Q8WV16 495 aa8.74□□□□□ -1.01
SF3B1-212ENST00000496458 SEC14L1Q92503 715 aa8.74□□□□□ -1.01
SF3B1-212ENST00000496458 KDM2BQ8NHM5 1336 aa8.74□□□□□ -1.01
SF3B1-212ENST00000496458 SLC6A11P48066 632 aa8.73□□□□□ -1.01
SF3B1-212ENST00000496458 FOXB2Q5VYV0 432 aa8.73□□□□□ -1.01
SF3B1-212ENST00000496458 RSPO2Q6UXX9 243 aaPredicted RBP8.73□□□□□ -1.01
SF3B1-212ENST00000496458 LRP10Q7Z4F1 713 aa8.73□□□□□ -1.01
SF3B1-212ENST00000496458 ZBTB38Q8NAP3 1195 aaPredicted RBP8.73□□□□□ -1.01
SF3B1-212ENST00000496458 PPARGC1AQ9UBK2 798 aaKnown RBP8.73□□□□□ -1.01
SF3B1-212ENST00000496458 FAM153BP0C7A2 387 aa8.72□□□□□ -1.01
SF3B1-212ENST00000496458 AFF3P51826 1226 aaKnown RBP8.72□□□□□ -1.01
SF3B1-212ENST00000496458 KRTAP19-4Q3LI73 84 aa8.72□□□□□ -1.01
SF3B1-212ENST00000496458 FAM209AQ5JX71 171 aa8.72□□□□□ -1.01
SF3B1-212ENST00000496458 TCERG1LQ5VWI1 586 aa8.72□□□□□ -1.01
SF3B1-212ENST00000496458 SPOCD1Q6ZMY3 1216 aa8.72□□□□□ -1.01
SF3B1-212ENST00000496458 AMIGO3Q86WK7 504 aa8.72□□□□□ -1.01
SF3B1-212ENST00000496458 DACT3Q96B18 629 aaPredicted RBP8.72□□□□□ -1.01
SF3B1-212ENST00000496458 DNAJC7Q99615 494 aa8.72□□□□□ -1.01
SF3B1-212ENST00000496458 PALD1Q9ULE6 856 aa8.72□□□□□ -1.01
SF3B1-212ENST00000496458 TRBV23-1A0A0A0MS06 115 aa8.71□□□□□ -1.02
SF3B1-212ENST00000496458 FOXO4P98177 505 aa8.71□□□□□ -1.02
SF3B1-212ENST00000496458 MILR1Q7Z6M3 343 aa8.71□□□□□ -1.02
SF3B1-212ENST00000496458 SCUBE1Q8IWY4 988 aa8.71□□□□□ -1.02
SF3B1-212ENST00000496458 MKL1Q969V6 931 aa8.71□□□□□ -1.02
SF3B1-212ENST00000496458 PWWP2AQ96N64 755 aa8.71□□□□□ -1.02
SF3B1-212ENST00000496458 IPO9Q96P70 1041 aaKnown RBP8.71□□□□□ -1.02
SF3B1-212ENST00000496458 OSBPL2Q9H1P3 480 aa8.71□□□□□ -1.02
SF3B1-212ENST00000496458 EPB41L1Q9H4G0 881 aa8.71□□□□□ -1.02
SF3B1-212ENST00000496458 STYK1Q6J9G0 422 aa8.7□□□□□ -1.02
SF3B1-212ENST00000496458 LBX2Q6XYB7 198 aa8.7□□□□□ -1.02
SF3B1-212ENST00000496458 B3GNT8Q7Z7M8 397 aa8.7□□□□□ -1.02
SF3B1-212ENST00000496458 SIAH1Q8IUQ4 282 aa8.7□□□□□ -1.02
SF3B1-212ENST00000496458 TMEM151BQ8IW70 566 aa8.7□□□□□ -1.02
SF3B1-212ENST00000496458 EXOC2Q96KP1 924 aa8.7□□□□□ -1.02
SF3B1-212ENST00000496458 DRC1Q96MC2 740 aa8.7□□□□□ -1.02
SF3B1-212ENST00000496458 CDIP1Q9H305 208 aa8.7□□□□□ -1.02
SF3B1-212ENST00000496458 BTBD11A6QL63 1104 aa8.69□□□□□ -1.02
SF3B1-212ENST00000496458 DGKIO75912 1065 aa8.69□□□□□ -1.02
SF3B1-212ENST00000496458 GPR85P60893 370 aa8.69□□□□□ -1.02
SF3B1-212ENST00000496458 SUMO1P63165 101 aaKnown RBP8.69□□□□□ -1.02
SF3B1-212ENST00000496458 CHRNA2Q15822 529 aa8.69□□□□□ -1.02
SF3B1-212ENST00000496458 STEAP3Q658P3 488 aa8.69□□□□□ -1.02
SF3B1-212ENST00000496458 ETV3LQ6ZN32 361 aa8.69□□□□□ -1.02
SF3B1-212ENST00000496458 SMARCC2Q8TAQ2 1214 aa8.69□□□□□ -1.02
SF3B1-212ENST00000496458 CPA5Q8WXQ8 436 aa8.69□□□□□ -1.02
SF3B1-212ENST00000496458 ZFYVE21Q9BQ24 234 aa8.69□□□□□ -1.02
SF3B1-212ENST00000496458 JAM3Q9BX67 310 aa8.69□□□□□ -1.02
SF3B1-212ENST00000496458 TRAF6Q9Y4K3 522 aa8.69□□□□□ -1.02
SF3B1-212ENST00000496458 PMF1-BGLAPU3KQ54 211 aa8.69□□□□□ -1.02
SF3B1-212ENST00000496458 ASXL2Q76L83 1435 aa8.69□□□□□ -1.02
SF3B1-212ENST00000496458 HGSO14964 777 aaPredicted RBP8.68□□□□□ -1.02
SF3B1-212ENST00000496458 PLA2G1BP04054 148 aaKnown RBP8.68□□□□□ -1.02
SF3B1-212ENST00000496458 GRK2P25098 689 aa8.68□□□□□ -1.02
SF3B1-212ENST00000496458 GRK3P35626 688 aa8.68□□□□□ -1.02
SF3B1-212ENST00000496458 CACNB2Q08289 660 aaPredicted RBP8.68□□□□□ -1.02
SF3B1-212ENST00000496458 KIZQ2M2Z5 673 aa8.68□□□□□ -1.02
SF3B1-212ENST00000496458 VMACQ2NL98 169 aa8.68□□□□□ -1.02
SF3B1-212ENST00000496458 DPH6Q7L8W6 267 aa8.68□□□□□ -1.02
SF3B1-212ENST00000496458 IFNL3Q8IZI9 196 aa8.68□□□□□ -1.02
SF3B1-212ENST00000496458 NLGN1Q8N2Q7 840 aa8.68□□□□□ -1.02
SF3B1-212ENST00000496458 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.68□□□□□ -1.02
SF3B1-212ENST00000496458 ZNF652Q9Y2D9 606 aa8.68□□□□□ -1.02
SF3B1-212ENST00000496458 C8BP07358 591 aa8.67□□□□□ -1.02
SF3B1-212ENST00000496458 BMS1Q14692 1282 aaKnown RBP8.67□□□□□ -1.02
SF3B1-212ENST00000496458 MIB1Q86YT6 1006 aa8.67□□□□□ -1.02
SF3B1-212ENST00000496458 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.67□□□□□ -1.028e-13■■□□□ 11.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms