RNA–Protein interactions for RNA: ENST00000496393.2

NVL-223, Transcript of nuclear VCP-like, human

TSL 3

Gene NVL, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NVL-223	ENST00000496393	DEFB103A	P81534	67 aa		9.28	□□□□□ -0.92
NVL-223	ENST00000496393	NACAP1	Q9BZK3	213 aa		9.28	□□□□□ -0.92
NVL-223	ENST00000496393	NAPB	Q9H115	298 aa		9.28	□□□□□ -0.92
NVL-223	ENST00000496393	ADD3	Q9UEY8	706 aa	Known RBP	9.28	□□□□□ -0.92
NVL-223	ENST00000496393	FRMPD2	Q68DX3	1309 aa	Predicted RBP	9.28	□□□□□ -0.92
NVL-223	ENST00000496393	PIEZO1	Q92508	2521 aa		9.28	□□□□□ -0.92
NVL-223	ENST00000496393	TSPY2	A6NKD2	308 aa		9.27	□□□□□ -0.93
NVL-223	ENST00000496393	PATL2	C9JE40	543 aa	Known RBP	9.27	□□□□□ -0.93
NVL-223	ENST00000496393	ICAM1	P05362	532 aa		9.27	□□□□□ -0.93
NVL-223	ENST00000496393	SLC3A2	P08195	630 aa	Known RBP	9.27	□□□□□ -0.93
NVL-223	ENST00000496393	WDR5	P61964	334 aa	Known RBP	9.27	□□□□□ -0.93
NVL-223	ENST00000496393	CTDSPL2	Q05D32	466 aa		9.27	□□□□□ -0.93
NVL-223	ENST00000496393	PDE4D	Q08499	809 aa		9.27	□□□□□ -0.93
NVL-223	ENST00000496393	PPP2R5B	Q15173	497 aa		9.27	□□□□□ -0.93
NVL-223	ENST00000496393	RCSD1	Q6JBY9	416 aa		9.27	□□□□□ -0.93
NVL-223	ENST00000496393	FAM117B	Q6P1L5	589 aa		9.27	□□□□□ -0.93
NVL-223	ENST00000496393	ALYREF	Q86V81	257 aa	Known RBP	9.27	□□□□□ -0.93
NVL-223	ENST00000496393	PHOSPHO2	Q8TCD6	241 aa		9.27	□□□□□ -0.93
NVL-223	ENST00000496393	MORC4	Q8TE76	937 aa		9.27	□□□□□ -0.93
NVL-223	ENST00000496393	UIMC1	Q96RL1	719 aa		9.27	□□□□□ -0.93
NVL-223	ENST00000496393	ZBED2	Q9BTP6	218 aa		9.27	□□□□□ -0.93
NVL-223	ENST00000496393	GPCPD1	Q9NPB8	672 aa		9.27	□□□□□ -0.93
NVL-223	ENST00000496393	IL17RB	Q9NRM6	502 aa		9.27	□□□□□ -0.93
NVL-223	ENST00000496393	TRIP12	Q14669	1992 aa	Predicted RBP	9.26	□□□□□ -0.93
NVL-223	ENST00000496393	RANBP6	O60518	1105 aa	Known RBP	9.26	□□□□□ -0.93
NVL-223	ENST00000496393	GPR37L1	O60883	481 aa		9.26	□□□□□ -0.93
NVL-223	ENST00000496393	ZFY	P08048	801 aa	Predicted RBP	9.26	□□□□□ -0.93
NVL-223	ENST00000496393	MS4A1	P11836	297 aa		9.26	□□□□□ -0.93
NVL-223	ENST00000496393	IL9	P15248	144 aa		9.26	□□□□□ -0.93
NVL-223	ENST00000496393	KCNA5	P22460	613 aa		9.26	□□□□□ -0.93
NVL-223	ENST00000496393	SSTR3	P32745	418 aa	Predicted RBP	9.26	□□□□□ -0.93
NVL-223	ENST00000496393	BFSP2	Q13515	415 aa		9.26	□□□□□ -0.93
NVL-223	ENST00000496393	PTGIS	Q16647	500 aa		9.26	□□□□□ -0.93
NVL-223	ENST00000496393	TCTN1	Q2MV58	587 aa		9.26	□□□□□ -0.93
NVL-223	ENST00000496393	BRDT	Q58F21	947 aa	Predicted RBP	9.26	□□□□□ -0.93
NVL-223	ENST00000496393	PPP4R3B	Q5MIZ7	849 aa		9.26	□□□□□ -0.93
NVL-223	ENST00000496393	SYDE2	Q5VT97	1194 aa		9.26	□□□□□ -0.93
NVL-223	ENST00000496393	NFRKB	Q6P4R8	1299 aa		9.26	□□□□□ -0.93
NVL-223	ENST00000496393	GPATCH3	Q96I76	525 aa		9.26	□□□□□ -0.93
NVL-223	ENST00000496393	KCNK17	Q96T54	332 aa		9.26	□□□□□ -0.93
NVL-223	ENST00000496393	FSD1	Q9BTV5	496 aa		9.26	□□□□□ -0.93
NVL-223	ENST00000496393	RANBP17	Q9H2T7	1088 aa	Known RBP	9.26	□□□□□ -0.93
NVL-223	ENST00000496393	UBE2Z	Q9H832	354 aa	Predicted RBP	9.26	□□□□□ -0.93
NVL-223	ENST00000496393	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	9.26	□□□□□ -0.93
NVL-223	ENST00000496393	RAD50	Q92878	1312 aa		9.26	□□□□□ -0.93
NVL-223	ENST00000496393	RBM47	A0AV96	593 aa	Known RBP	9.25	□□□□□ -0.93
NVL-223	ENST00000496393	PI4K2B	G5E9Z4	385 aa		9.25	□□□□□ -0.93
NVL-223	ENST00000496393	PLA2G6	O60733	806 aa		9.25	□□□□□ -0.93
NVL-223	ENST00000496393	BAIAP3	O94812	1187 aa		9.25	□□□□□ -0.93
NVL-223	ENST00000496393	ARIH2	O95376	493 aa		9.25	□□□□□ -0.93
NVL-223	ENST00000496393	TXN	P10599	105 aa	Known RBP	9.25	□□□□□ -0.93
NVL-223	ENST00000496393	RPS6	P62753	249 aa	Known RBP	9.25	□□□□□ -0.93
NVL-223	ENST00000496393	GPNMB	Q14956	572 aa		9.25	□□□□□ -0.93
NVL-223	ENST00000496393	RRP12	Q5JTH9	1297 aa	Known RBP	9.25	□□□□□ -0.93
NVL-223	ENST00000496393	GDF6	Q6KF10	455 aa	Predicted RBP	9.25	□□□□□ -0.93
NVL-223	ENST00000496393	RNF207	Q6ZRF8	634 aa		9.25	□□□□□ -0.93
NVL-223	ENST00000496393	LRRC8D	Q7L1W4	858 aa		9.25	□□□□□ -0.93
NVL-223	ENST00000496393	CHST3	Q7LGC8	479 aa		9.25	□□□□□ -0.93
NVL-223	ENST00000496393	SCFD2	Q8WU76	684 aa		9.25	□□□□□ -0.93
NVL-223	ENST00000496393	DCAF4	Q8WV16	495 aa		9.25	□□□□□ -0.93
NVL-223	ENST00000496393	CLEC4D	Q8WXI8	215 aa		9.25	□□□□□ -0.93
NVL-223	ENST00000496393	DHX38	Q92620	1227 aa	Known RBP	9.25	□□□□□ -0.93
NVL-223	ENST00000496393	CTAGE1	Q96RT6	745 aa		9.25	□□□□□ -0.93
NVL-223	ENST00000496393	CRBN	Q96SW2	442 aa		9.25	□□□□□ -0.93
NVL-223	ENST00000496393	SUGCT	Q9HAC7	445 aa		9.25	□□□□□ -0.93
NVL-223	ENST00000496393	TOMM22	Q9NS69	142 aa		9.25	□□□□□ -0.93
NVL-223	ENST00000496393	ARIH1	Q9Y4X5	557 aa	Predicted RBP	9.25	□□□□□ -0.93
NVL-223	ENST00000496393	SI	P14410	1827 aa		9.24	□□□□□ -0.93
NVL-223	ENST00000496393		A6NJR5	290 aa		9.24	□□□□□ -0.93
NVL-223	ENST00000496393	FOXP2	O15409	715 aa		9.24	□□□□□ -0.93
NVL-223	ENST00000496393	NBN	O60934	754 aa		9.24	□□□□□ -0.93
NVL-223	ENST00000496393	USH1G	Q495M9	461 aa		9.24	□□□□□ -0.93
NVL-223	ENST00000496393	C20orf194	Q5TEA3	1177 aa		9.24	□□□□□ -0.93
NVL-223	ENST00000496393	VPS53	Q5VIR6	699 aa		9.24	□□□□□ -0.93
NVL-223	ENST00000496393	HS6ST3	Q8IZP7	471 aa		9.24	□□□□□ -0.93
NVL-223	ENST00000496393	GJD3	Q8N144	294 aa		9.24	□□□□□ -0.93
NVL-223	ENST00000496393	OTUD7A	Q8TE49	926 aa	Predicted RBP	9.24	□□□□□ -0.93
NVL-223	ENST00000496393	AFAP1L1	Q8TED9	768 aa		9.24	□□□□□ -0.93
NVL-223	ENST00000496393	AFG1L	Q8WV93	481 aa		9.24	□□□□□ -0.93
NVL-223	ENST00000496393	C17orf80	Q9BSJ5	609 aa		9.24	□□□□□ -0.93
NVL-223	ENST00000496393	LINC01553	A4QN01	128 aa		9.23	□□□□□ -0.93
NVL-223	ENST00000496393		H3BQ06	376 aa	Predicted RBP	9.23	□□□□□ -0.93
NVL-223	ENST00000496393	NKRF	O15226	690 aa	Known RBP eCLIP	9.23	□□□□□ -0.93
NVL-223	ENST00000496393	KPNA6	O60684	536 aa		9.23	□□□□□ -0.93
NVL-223	ENST00000496393	GJB5	O95377	273 aa		9.23	□□□□□ -0.93
NVL-223	ENST00000496393	MMP3	P08254	477 aa		9.23	□□□□□ -0.93
NVL-223	ENST00000496393	SELP	P16109	830 aa		9.23	□□□□□ -0.93
NVL-223	ENST00000496393	PTPN11	Q06124	597 aa	Predicted RBP	9.23	□□□□□ -0.93
NVL-223	ENST00000496393	ZMYM1	Q5SVZ6	1142 aa		9.23	□□□□□ -0.93
NVL-223	ENST00000496393	PTCRA	Q6ISU1	281 aa	Predicted RBP	9.23	□□□□□ -0.93
NVL-223	ENST00000496393	CNKSR3	Q6P9H4	555 aa		9.23	□□□□□ -0.93
NVL-223	ENST00000496393	EP400NL	Q6ZTU2	488 aa		9.23	□□□□□ -0.93
NVL-223	ENST00000496393	SEPT14	Q6ZU15	432 aa		9.23	□□□□□ -0.93
NVL-223	ENST00000496393	FAM178B	Q8IXR5	827 aa		9.23	□□□□□ -0.93
NVL-223	ENST00000496393	CCDC155	Q8N6L0	562 aa		9.23	□□□□□ -0.93
NVL-223	ENST00000496393	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	9.23	□□□□□ -0.93
NVL-223	ENST00000496393	CAGE1	Q8TC20	777 aa		9.23	□□□□□ -0.93
NVL-223	ENST00000496393	TGS1	Q96RS0	853 aa	Known RBP	9.23	□□□□□ -0.93
NVL-223	ENST00000496393	TMEM47	Q9BQJ4	181 aa		9.23	□□□□□ -0.93
NVL-223	ENST00000496393	ALG1	Q9BT22	464 aa		9.23	□□□□□ -0.93

Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms