RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 B4GALNT2Q8NHY0 566 aa9.99□□□□□ -0.81
HPS4-217ENST00000496385 FAM89AQ96GI7 184 aa9.99□□□□□ -0.81
HPS4-217ENST00000496385 MMTAG2Q9BU76 263 aaKnown RBP9.99□□□□□ -0.81
HPS4-217ENST00000496385 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.99□□□□□ -0.81
HPS4-217ENST00000496385 CTNNAL1Q9UBT7 734 aa9.99□□□□□ -0.81
HPS4-217ENST00000496385 RWDD2AQ9UIY3 292 aa9.99□□□□□ -0.81
HPS4-217ENST00000496385 KLF18A0A0U1RQI7 1052 aa9.99□□□□□ -0.81
HPS4-217ENST00000496385 GOLGA8BA8MQT2 603 aa9.99□□□□□ -0.81
HPS4-217ENST00000496385 E7ENQ6 273 aa9.99□□□□□ -0.81
HPS4-217ENST00000496385 SMIM24O75264 130 aa9.99□□□□□ -0.81
HPS4-217ENST00000496385 FLOT1O75955 427 aa9.99□□□□□ -0.81
HPS4-217ENST00000496385 IGKV5-2P06315 115 aa9.99□□□□□ -0.81
HPS4-217ENST00000496385 CUL3Q13618 768 aa9.99□□□□□ -0.81
HPS4-217ENST00000496385 CLEC4GQ6UXB4 293 aa9.99□□□□□ -0.81
HPS4-217ENST00000496385 APBB1IPQ7Z5R6 666 aaPredicted RBP9.99□□□□□ -0.81
HPS4-217ENST00000496385 SH3RF1Q7Z6J0 888 aa9.99□□□□□ -0.81
HPS4-217ENST00000496385 ZNF34Q8IZ26 560 aa9.99□□□□□ -0.81
HPS4-217ENST00000496385 NLGN2Q8NFZ4 835 aa9.99□□□□□ -0.81
HPS4-217ENST00000496385 LRRC45Q96CN5 670 aa9.99□□□□□ -0.81
HPS4-217ENST00000496385 FBXO2Q9UK22 296 aaPredicted RBP9.99□□□□□ -0.81
HPS4-217ENST00000496385 SRPRBQ9Y5M8 271 aaKnown RBP9.99□□□□□ -0.81
HPS4-217ENST00000496385 LRP5O75197 1615 aa9.99□□□□□ -0.81
HPS4-217ENST00000496385 GPR75-ASB3A0A0A6YYF3 556 aa9.98□□□□□ -0.81
HPS4-217ENST00000496385 PPP1R3GB7ZBB8 358 aa9.98□□□□□ -0.81
HPS4-217ENST00000496385 WFS1O76024 890 aa9.98□□□□□ -0.81
HPS4-217ENST00000496385 ERFEQ4G0M1 354 aa9.98□□□□□ -0.81
HPS4-217ENST00000496385 LRRC23Q53EV4 343 aaPredicted RBP9.98□□□□□ -0.81
HPS4-217ENST00000496385 RILPL1Q5EBL4 403 aa9.98□□□□□ -0.81
HPS4-217ENST00000496385 PRR5LQ6MZQ0 368 aa9.98□□□□□ -0.81
HPS4-217ENST00000496385 NFXL1Q6ZNB6 911 aa9.98□□□□□ -0.81
HPS4-217ENST00000496385 NLRP10Q86W26 655 aa9.98□□□□□ -0.81
HPS4-217ENST00000496385 ZNF513Q8N8E2 541 aaPredicted RBP9.98□□□□□ -0.81
HPS4-217ENST00000496385 CNBD1Q8NA66 436 aa9.98□□□□□ -0.81
HPS4-217ENST00000496385 AGAP11Q8TF27 550 aa9.98□□□□□ -0.81
HPS4-217ENST00000496385 EPAS1Q99814 870 aa9.98□□□□□ -0.81
HPS4-217ENST00000496385 GORASP1Q9BQQ3 440 aa9.98□□□□□ -0.81
HPS4-217ENST00000496385 METTL22Q9BUU2 404 aaPredicted RBP9.98□□□□□ -0.81
HPS4-217ENST00000496385 TRMT112Q9UI30 125 aaKnown RBP9.98□□□□□ -0.81
HPS4-217ENST00000496385 ASB3Q9Y575 518 aa9.98□□□□□ -0.81
HPS4-217ENST00000496385 AFDNP55196 1824 aaKnown RBP9.98□□□□□ -0.81
HPS4-217ENST00000496385 RNF225M0QZC1 329 aaPredicted RBP9.98□□□□□ -0.81
HPS4-217ENST00000496385 DIAPH2O60879 1101 aa9.98□□□□□ -0.81
HPS4-217ENST00000496385 RNF8O76064 485 aa9.98□□□□□ -0.81
HPS4-217ENST00000496385 HSPD1P10809 573 aaKnown RBP9.98□□□□□ -0.81
HPS4-217ENST00000496385 GNAT1P11488 350 aa9.98□□□□□ -0.81
HPS4-217ENST00000496385 DRD4P21917 467 aa9.98□□□□□ -0.81
HPS4-217ENST00000496385 CTCFP49711 727 aaPredicted RBP9.98□□□□□ -0.81
HPS4-217ENST00000496385 ZNF131P52739 623 aa9.98□□□□□ -0.81
HPS4-217ENST00000496385 QPCTQ16769 361 aa9.98□□□□□ -0.81
HPS4-217ENST00000496385 TCP11X2Q5H9J9 407 aa9.98□□□□□ -0.81
HPS4-217ENST00000496385 STK11IPQ8N1F8 1099 aa9.98□□□□□ -0.81
HPS4-217ENST00000496385 LINS1Q8NG48 757 aa9.98□□□□□ -0.81
HPS4-217ENST00000496385 MIPOL1Q8TD10 442 aa9.98□□□□□ -0.81
HPS4-217ENST00000496385 CHMP6Q96FZ7 201 aa9.98□□□□□ -0.81
HPS4-217ENST00000496385 TTC26A0AVF1 554 aa9.97□□□□□ -0.81
HPS4-217ENST00000496385 GRID2IPA4D2P6 1211 aa9.97□□□□□ -0.81
HPS4-217ENST00000496385 GRM8O00222 908 aa9.97□□□□□ -0.81
HPS4-217ENST00000496385 CHRNA5P30532 468 aa9.97□□□□□ -0.81
HPS4-217ENST00000496385 MTMR3Q13615 1198 aa9.97□□□□□ -0.81
HPS4-217ENST00000496385 CFAP221Q4G0U5 840 aa9.97□□□□□ -0.81
HPS4-217ENST00000496385 HHATQ5VTY9 493 aa9.97□□□□□ -0.81
HPS4-217ENST00000496385 LMNTD2Q8IXW0 634 aa9.97□□□□□ -0.81
HPS4-217ENST00000496385 GBP7Q8N8V2 638 aaPredicted RBP9.97□□□□□ -0.81
HPS4-217ENST00000496385 ATL2Q8NHH9 583 aa9.97□□□□□ -0.81
HPS4-217ENST00000496385 RAPGEF5Q92565 580 aa9.97□□□□□ -0.81
HPS4-217ENST00000496385 RBM41Q96IZ5 413 aaKnown RBP9.97□□□□□ -0.81
HPS4-217ENST00000496385 CCDC85AQ96PX6 553 aaPredicted RBP9.97□□□□□ -0.81
HPS4-217ENST00000496385 LMCD1Q9NZU5 365 aa9.97□□□□□ -0.81
HPS4-217ENST00000496385 MYO5AQ9Y4I1 1855 aaKnown RBP9.97□□□□□ -0.81
HPS4-217ENST00000496385 A0A0G2JLW4 131 aa9.97□□□□□ -0.81
HPS4-217ENST00000496385 H7C1D1 291 aa9.97□□□□□ -0.81
HPS4-217ENST00000496385 CLTAP09496 248 aa9.97□□□□□ -0.81
HPS4-217ENST00000496385 ALDH3A1P30838 453 aa9.97□□□□□ -0.81
HPS4-217ENST00000496385 NEXNQ0ZGT2 675 aa9.97□□□□□ -0.81
HPS4-217ENST00000496385 WDR59Q6PJI9 974 aa9.97□□□□□ -0.81
HPS4-217ENST00000496385 NOC3LQ8WTT2 800 aaKnown RBP9.97□□□□□ -0.81
HPS4-217ENST00000496385 WASF1Q92558 559 aa9.97□□□□□ -0.81
HPS4-217ENST00000496385 NAF1Q96HR8 494 aaKnown RBP9.97□□□□□ -0.81
HPS4-217ENST00000496385 OSBPL1AQ9BXW6 950 aa9.97□□□□□ -0.81
HPS4-217ENST00000496385 COPRSQ9NQ92 184 aa9.97□□□□□ -0.81
HPS4-217ENST00000496385 PLAAQ9Y263 795 aa9.97□□□□□ -0.81
HPS4-217ENST00000496385 PRC1O43663 620 aa9.97□□□□□ -0.81
HPS4-217ENST00000496385 NQO1P15559 274 aaKnown RBP9.97□□□□□ -0.81
HPS4-217ENST00000496385 CD44P16070 742 aaKnown RBP9.97□□□□□ -0.81
HPS4-217ENST00000496385 ATP2A2P16615 1042 aaKnown RBP9.97□□□□□ -0.81
HPS4-217ENST00000496385 SLC7A5Q01650 507 aa9.97□□□□□ -0.81
HPS4-217ENST00000496385 SETDB1Q15047 1291 aa9.97□□□□□ -0.81
HPS4-217ENST00000496385 SPA17Q15506 151 aa9.97□□□□□ -0.81
HPS4-217ENST00000496385 TNNI3KQ59H18 835 aa9.97□□□□□ -0.81
HPS4-217ENST00000496385 C1QTNF12Q5T7M4 302 aa9.97□□□□□ -0.81
HPS4-217ENST00000496385 C3orf67Q6ZVT6 689 aa9.97□□□□□ -0.81
HPS4-217ENST00000496385 PNMA8AQ86V59 439 aaPredicted RBP9.97□□□□□ -0.81
HPS4-217ENST00000496385 MB21D1Q8N884 522 aa9.97□□□□□ -0.81
HPS4-217ENST00000496385 PYM1Q9BRP8 204 aaKnown RBP9.97□□□□□ -0.81
HPS4-217ENST00000496385 ISCA1Q9BUE6 129 aa9.97□□□□□ -0.81
HPS4-217ENST00000496385 LACRTQ9GZZ8 138 aa9.97□□□□□ -0.81
HPS4-217ENST00000496385 WDR35Q9P2L0 1181 aa9.97□□□□□ -0.81
HPS4-217ENST00000496385 LRRC42Q9Y546 428 aa9.97□□□□□ -0.81
HPS4-217ENST00000496385 FPGT-TNNI3KV9GXZ4 949 aa9.97□□□□□ -0.81
HPS4-217ENST00000496385 STK36Q9NRP7 1315 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms