RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 HOMER1Q86YM7 354 aa12.68□□□□□ -0.38
RNF220-217ENST00000496262 MICALL1Q8N3F8 863 aa12.68□□□□□ -0.38
RNF220-217ENST00000496262 VWCEQ96DN2 955 aa12.68□□□□□ -0.38
RNF220-217ENST00000496262 FTOQ9C0B1 505 aaKnown RBP eCLIP12.68□□□□□ -0.38
RNF220-217ENST00000496262 BRPF3Q9ULD4 1205 aa12.68□□□□□ -0.38
RNF220-217ENST00000496262 KLRF2D3W0D1 207 aa12.67□□□□□ -0.38
RNF220-217ENST00000496262 GH1P01241 217 aa12.67□□□□□ -0.38
RNF220-217ENST00000496262 MMP3P08254 477 aa12.67□□□□□ -0.38
RNF220-217ENST00000496262 ATP2A2P16615 1042 aaKnown RBP12.67□□□□□ -0.38
RNF220-217ENST00000496262 HOXA13P31271 388 aaPredicted RBP12.67□□□□□ -0.38
RNF220-217ENST00000496262 NT5C2P49902 561 aa12.67□□□□□ -0.38
RNF220-217ENST00000496262 ARHGAP1Q07960 439 aa12.67□□□□□ -0.38
RNF220-217ENST00000496262 ADGRE1Q14246 886 aa12.67□□□□□ -0.38
RNF220-217ENST00000496262 CCDC62Q6P9F0 684 aa12.67□□□□□ -0.38
RNF220-217ENST00000496262 RETREG2Q8NC44 543 aa12.67□□□□□ -0.38
RNF220-217ENST00000496262 AMNQ9BXJ7 453 aa12.67□□□□□ -0.38
RNF220-217ENST00000496262 MRVI1Q9Y6F6 885 aa12.67□□□□□ -0.38
RNF220-217ENST00000496262 RBAK-RBAKDNI3L0D1 243 aa12.66□□□□□ -0.38
RNF220-217ENST00000496262 PPP1R11O60927 126 aaPredicted RBP12.66□□□□□ -0.38
RNF220-217ENST00000496262 MYCLP12524 364 aaPredicted RBP12.66□□□□□ -0.38
RNF220-217ENST00000496262 ACTN1P12814 892 aa12.66□□□□□ -0.38
RNF220-217ENST00000496262 TRDNQ13061 729 aa12.66□□□□□ -0.38
RNF220-217ENST00000496262 BFSP2Q13515 415 aa12.66□□□□□ -0.38
RNF220-217ENST00000496262 PTGISQ16647 500 aa12.66□□□□□ -0.38
RNF220-217ENST00000496262 IWS1Q96ST2 819 aa12.66□□□□□ -0.38
RNF220-217ENST00000496262 RNF39Q9H2S5 420 aa12.66□□□□□ -0.38
RNF220-217ENST00000496262 CERS4Q9HA82 394 aa12.66□□□□□ -0.38
RNF220-217ENST00000496262 PXMP2Q9NR77 195 aa12.66□□□□□ -0.38
RNF220-217ENST00000496262 PCDHA1Q9Y5I3 950 aa12.66□□□□□ -0.38
RNF220-217ENST00000496262 SPTBN5Q9NRC6 3674 aaKnown RBP12.66□□□□□ -0.38
RNF220-217ENST00000496262 IFIT3O14879 490 aaKnown RBP12.65□□□□□ -0.38
RNF220-217ENST00000496262 ZBTB5O15062 677 aa12.65□□□□□ -0.38
RNF220-217ENST00000496262 CA3P07451 260 aa12.65□□□□□ -0.38
RNF220-217ENST00000496262 NR3C2P08235 984 aa12.65□□□□□ -0.38
RNF220-217ENST00000496262 PFKMP08237 780 aa12.65□□□□□ -0.38
RNF220-217ENST00000496262 IQCF3P0C7M6 154 aa12.65□□□□□ -0.38
RNF220-217ENST00000496262 ZNF286BP0CG31 522 aa12.65□□□□□ -0.38
RNF220-217ENST00000496262 PTH1RQ03431 593 aa12.65□□□□□ -0.38
RNF220-217ENST00000496262 PTPN11Q06124 597 aaPredicted RBP12.65□□□□□ -0.38
RNF220-217ENST00000496262 SEC23AQ15436 765 aa12.65□□□□□ -0.38
RNF220-217ENST00000496262 GDF6Q6KF10 455 aaPredicted RBP12.65□□□□□ -0.38
RNF220-217ENST00000496262 RALYLQ86SE5 291 aaKnown RBP12.65□□□□□ -0.38
RNF220-217ENST00000496262 PIBF1Q8WXW3 757 aa12.65□□□□□ -0.38
RNF220-217ENST00000496262 ZFP91Q96JP5 570 aaPredicted RBP12.65□□□□□ -0.38
RNF220-217ENST00000496262 PIGSQ96S52 555 aa12.65□□□□□ -0.38
RNF220-217ENST00000496262 ALG1Q9BT22 464 aa12.65□□□□□ -0.38
RNF220-217ENST00000496262 SENP2Q9HC62 589 aa12.65□□□□□ -0.38
RNF220-217ENST00000496262 MAD2L2Q9UI95 211 aa12.65□□□□□ -0.38
RNF220-217ENST00000496262 PCDHA11Q9Y5I1 949 aa12.65□□□□□ -0.38
RNF220-217ENST00000496262 TAF6LQ9Y6J9 622 aa12.65□□□□□ -0.38
RNF220-217ENST00000496262 CHD7Q9P2D1 2997 aa12.65□□□□□ -0.38
RNF220-217ENST00000496262 ERICH2A1L162 156 aa12.64□□□□□ -0.39
RNF220-217ENST00000496262 PITPNM1O00562 1244 aa12.64□□□□□ -0.39
RNF220-217ENST00000496262 OPLAHO14841 1288 aa12.64□□□□□ -0.39
RNF220-217ENST00000496262 EIF3JO75822 258 aaKnown RBP12.64□□□□□ -0.39
RNF220-217ENST00000496262 CYP21A2P08686 494 aa12.64□□□□□ -0.39
RNF220-217ENST00000496262 CASTP20810 708 aaKnown RBP12.64□□□□□ -0.39
RNF220-217ENST00000496262 RFC2P35250 354 aa12.64□□□□□ -0.39
RNF220-217ENST00000496262 HSD17B4P51659 736 aa12.64□□□□□ -0.39
RNF220-217ENST00000496262 DGKDQ16760 1214 aa12.64□□□□□ -0.39
RNF220-217ENST00000496262 TMEM67Q5HYA8 995 aa12.64□□□□□ -0.39
RNF220-217ENST00000496262 TJAP1Q5JTD0 557 aa12.64□□□□□ -0.39
RNF220-217ENST00000496262 C7orf31Q8N865 590 aa12.64□□□□□ -0.39
RNF220-217ENST00000496262 KAT2BQ92831 832 aa12.64□□□□□ -0.39
RNF220-217ENST00000496262 UPF2Q9HAU5 1272 aaKnown RBP12.64□□□□□ -0.39
RNF220-217ENST00000496262 DDX41Q9UJV9 622 aaKnown RBP12.64□□□□□ -0.39
RNF220-217ENST00000496262 U3KPZ7 1027 aaPredicted RBP12.64□□□□□ -0.39
RNF220-217ENST00000496262 GBF1Q92538 1859 aa12.63□□□□□ -0.39
RNF220-217ENST00000496262 SCN10AQ9Y5Y9 1956 aa12.63□□□□□ -0.39
RNF220-217ENST00000496262 SCN5AQ14524 2016 aa12.63□□□□□ -0.39
RNF220-217ENST00000496262 PALM3A6NDB9 673 aaPredicted RBP12.63□□□□□ -0.39
RNF220-217ENST00000496262 RFXAPO00287 272 aa12.63□□□□□ -0.39
RNF220-217ENST00000496262 CHMLP26374 656 aa12.63□□□□□ -0.39
RNF220-217ENST00000496262 PSEN2P49810 448 aa12.63□□□□□ -0.39
RNF220-217ENST00000496262 MFSD10Q14728 455 aa12.63□□□□□ -0.39
RNF220-217ENST00000496262 GRM4Q14833 912 aa12.63□□□□□ -0.39
RNF220-217ENST00000496262 SLC35G1Q2M3R5 365 aa12.63□□□□□ -0.39
RNF220-217ENST00000496262 FCHSD1Q86WN1 690 aa12.63□□□□□ -0.39
RNF220-217ENST00000496262 DHX37Q8IY37 1157 aaKnown RBP12.63□□□□□ -0.39
RNF220-217ENST00000496262 CCDC155Q8N6L0 562 aa12.63□□□□□ -0.39
RNF220-217ENST00000496262 IL31RAQ8NI17 732 aa12.63□□□□□ -0.39
RNF220-217ENST00000496262 RUFY2Q8WXA3 655 aa12.63□□□□□ -0.39
RNF220-217ENST00000496262 SYMPKQ92797 1274 aaKnown RBP12.63□□□□□ -0.39
RNF220-217ENST00000496262 MAF1Q9H063 256 aa12.63□□□□□ -0.39
RNF220-217ENST00000496262 THEGQ9P2T0 379 aa12.63□□□□□ -0.39
RNF220-217ENST00000496262 HDAC6Q9UBN7 1215 aa12.63□□□□□ -0.39
RNF220-217ENST00000496262 E7EWF7 191 aa12.62□□□□□ -0.39
RNF220-217ENST00000496262 KCNJ6P48051 423 aa12.62□□□□□ -0.39
RNF220-217ENST00000496262 LAMC2Q13753 1193 aa12.62□□□□□ -0.39
RNF220-217ENST00000496262 WTAPQ15007 396 aa12.62□□□□□ -0.39
RNF220-217ENST00000496262 SART3Q15020 963 aaKnown RBP12.62□□□□□ -0.39
RNF220-217ENST00000496262 PGM5Q15124 567 aa12.62□□□□□ -0.39
RNF220-217ENST00000496262 SKIV2LQ15477 1246 aaKnown RBP12.62□□□□□ -0.39
RNF220-217ENST00000496262 KIAA0753Q2KHM9 967 aa12.62□□□□□ -0.39
RNF220-217ENST00000496262 TMCO2Q7Z6W1 182 aaPredicted RBP12.62□□□□□ -0.39
RNF220-217ENST00000496262 NCOA7Q8NI08 942 aa12.62□□□□□ -0.39
RNF220-217ENST00000496262 CAGE1Q8TC20 777 aa12.62□□□□□ -0.39
RNF220-217ENST00000496262 AFAP1L1Q8TED9 768 aa12.62□□□□□ -0.39
RNF220-217ENST00000496262 DHX38Q92620 1227 aaKnown RBP12.62□□□□□ -0.39
RNF220-217ENST00000496262 GPKOWQ92917 476 aaPredicted RBP eCLIP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms