RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 RAB11FIP4Q86YS3 637 aa9.66□□□□□ -0.86
VPS13B-206ENST00000496144 RBPJLQ9UBG7 517 aa9.66□□□□□ -0.86
VPS13B-206ENST00000496144 USP25Q9UHP3 1055 aa9.66□□□□□ -0.86
VPS13B-206ENST00000496144 CYP2D7A0A087X1C5 515 aa9.66□□□□□ -0.86
VPS13B-206ENST00000496144 PGK2P07205 417 aa9.66□□□□□ -0.86
VPS13B-206ENST00000496144 LIFRP42702 1097 aa9.66□□□□□ -0.86
VPS13B-206ENST00000496144 SAMD3Q8N6K7 520 aa9.66□□□□□ -0.86
VPS13B-206ENST00000496144 CCDC148Q8NFR7 591 aa9.66□□□□□ -0.86
VPS13B-206ENST00000496144 NUP88Q99567 741 aaPredicted RBP9.66□□□□□ -0.86
VPS13B-206ENST00000496144 INCENPQ9NQS7 918 aa9.66□□□□□ -0.86
VPS13B-206ENST00000496144 FOSL2P15408 326 aa9.65□□□□□ -0.86
VPS13B-206ENST00000496144 CEBPZQ03701 1054 aaKnown RBP9.65□□□□□ -0.86
VPS13B-206ENST00000496144 LBX2Q6XYB7 198 aa9.65□□□□□ -0.86
VPS13B-206ENST00000496144 ARMCX2Q7L311 632 aa9.65□□□□□ -0.86
VPS13B-206ENST00000496144 DEFB123Q8N688 67 aa9.65□□□□□ -0.86
VPS13B-206ENST00000496144 MTA3Q9BTC8 594 aa9.65□□□□□ -0.86
VPS13B-206ENST00000496144 MAF1Q9H063 256 aa9.65□□□□□ -0.86
VPS13B-206ENST00000496144 FOCADQ5VW36 1801 aa9.65□□□□□ -0.86
VPS13B-206ENST00000496144 ADAMTSL1Q8N6G6 1762 aa9.65□□□□□ -0.86
VPS13B-206ENST00000496144 AP5Z1O43299 807 aa9.65□□□□□ -0.86
VPS13B-206ENST00000496144 MAP3K10Q02779 954 aa9.65□□□□□ -0.86
VPS13B-206ENST00000496144 FAM200AQ8TCP9 573 aa9.65□□□□□ -0.86
VPS13B-206ENST00000496144 CLIC4Q9Y696 253 aa9.65□□□□□ -0.86
VPS13B-206ENST00000496144 CTAGE5O15320 804 aa9.65□□□□□ -0.86
VPS13B-206ENST00000496144 PPFIA3O75145 1194 aa9.65□□□□□ -0.86
VPS13B-206ENST00000496144 DUSP11O75319 330 aaKnown RBP9.65□□□□□ -0.86
VPS13B-206ENST00000496144 PFKMP08237 780 aa9.65□□□□□ -0.86
VPS13B-206ENST00000496144 TXNP10599 105 aaKnown RBP9.65□□□□□ -0.86
VPS13B-206ENST00000496144 NTRK3Q16288 839 aa9.65□□□□□ -0.86
VPS13B-206ENST00000496144 FSCN1Q16658 493 aaKnown RBP9.65□□□□□ -0.86
VPS13B-206ENST00000496144 FCHSD1Q86WN1 690 aa9.65□□□□□ -0.86
VPS13B-206ENST00000496144 FBXO18Q8NFZ0 1043 aa9.65□□□□□ -0.86
VPS13B-206ENST00000496144 WASF1Q92558 559 aa9.65□□□□□ -0.86
VPS13B-206ENST00000496144 RIOK1Q9BRS2 568 aaKnown RBP9.65□□□□□ -0.86
VPS13B-206ENST00000496144 PPP1R12CQ9BZL4 782 aa9.65□□□□□ -0.86
VPS13B-206ENST00000496144 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.65□□□□□ -0.87
VPS13B-206ENST00000496144 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.65□□□□□ -0.87
VPS13B-206ENST00000496144 GOLGA8AA7E2F4 631 aa9.65□□□□□ -0.87
VPS13B-206ENST00000496144 DGKDQ16760 1214 aa9.65□□□□□ -0.87
VPS13B-206ENST00000496144 ANO6Q4KMQ2 910 aa9.65□□□□□ -0.87
VPS13B-206ENST00000496144 TLK2Q86UE8 772 aa9.65□□□□□ -0.87
VPS13B-206ENST00000496144 PNMA1Q8ND90 353 aa9.65□□□□□ -0.87
VPS13B-206ENST00000496144 TRIB2Q92519 343 aa9.65□□□□□ -0.87
VPS13B-206ENST00000496144 ZSWIM5Q9P217 1185 aa9.65□□□□□ -0.87
VPS13B-206ENST00000496144 MYH2Q9UKX2 1941 aa9.65□□□□□ -0.87
VPS13B-206ENST00000496144 TULP1O00294 542 aaPredicted RBP9.64□□□□□ -0.87
VPS13B-206ENST00000496144 ZBTB43O43298 467 aa9.64□□□□□ -0.87
VPS13B-206ENST00000496144 ORC4O43929 436 aa9.64□□□□□ -0.87
VPS13B-206ENST00000496144 DKC1O60832 514 aaKnown RBP eCLIP9.64□□□□□ -0.87
VPS13B-206ENST00000496144 AMHP03971 560 aa9.64□□□□□ -0.87
VPS13B-206ENST00000496144 RCAN1P53805 252 aa9.64□□□□□ -0.87
VPS13B-206ENST00000496144 PTPROQ16827 1216 aa9.64□□□□□ -0.87
VPS13B-206ENST00000496144 ENGASEQ8NFI3 743 aa9.64□□□□□ -0.87
VPS13B-206ENST00000496144 ALG1Q9BT22 464 aa9.64□□□□□ -0.87
VPS13B-206ENST00000496144 PORCNQ9H237 461 aa9.64□□□□□ -0.87
VPS13B-206ENST00000496144 FAM217BQ9NTX9 383 aaPredicted RBP9.64□□□□□ -0.87
VPS13B-206ENST00000496144 BACH1O14867 736 aa9.64□□□□□ -0.87
VPS13B-206ENST00000496144 RFC2P35250 354 aa9.64□□□□□ -0.87
VPS13B-206ENST00000496144 NEDD9Q14511 834 aa9.64□□□□□ -0.87
VPS13B-206ENST00000496144 GMCL1Q96IK5 515 aa9.64□□□□□ -0.87
VPS13B-206ENST00000496144 MAML3Q96JK9 1138 aa9.64□□□□□ -0.87
VPS13B-206ENST00000496144 IWS1Q96ST2 819 aa9.64□□□□□ -0.87
VPS13B-206ENST00000496144 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.64□□□□□ -0.87
VPS13B-206ENST00000496144 BAZ2AQ9UIF9 1905 aaKnown RBP9.64□□□□□ -0.87
VPS13B-206ENST00000496144 A0A1W2PQ27 194 aa9.64□□□□□ -0.87
VPS13B-206ENST00000496144 A0A1W2PQ64 194 aa9.64□□□□□ -0.87
VPS13B-206ENST00000496144 A0A1W2PQD8 194 aa9.64□□□□□ -0.87
VPS13B-206ENST00000496144 CDC37Q16543 378 aaPredicted RBP9.64□□□□□ -0.87
VPS13B-206ENST00000496144 ZNF467Q7Z7K2 595 aaPredicted RBP9.64□□□□□ -0.87
VPS13B-206ENST00000496144 LINC00301Q8NCQ3 95 aa9.64□□□□□ -0.87
VPS13B-206ENST00000496144 GLG1Q92896 1179 aa9.64□□□□□ -0.87
VPS13B-206ENST00000496144 SAMM50Q9Y512 469 aa9.64□□□□□ -0.87
VPS13B-206ENST00000496144 NAPAP54920 295 aa9.64□□□□□ -0.87
VPS13B-206ENST00000496144 FAM160A1Q05DH4 1040 aa9.64□□□□□ -0.87
VPS13B-206ENST00000496144 CBX8Q9HC52 389 aa9.64□□□□□ -0.87
VPS13B-206ENST00000496144 PCDHA7Q9UN72 937 aa9.64□□□□□ -0.87
VPS13B-206ENST00000496144 CASP8AP2Q9UKL3 1982 aa9.64□□□□□ -0.87
VPS13B-206ENST00000496144 YEATS4O95619 227 aa9.64□□□□□ -0.87
VPS13B-206ENST00000496144 ICAM1P05362 532 aa9.64□□□□□ -0.87
VPS13B-206ENST00000496144 LAMC2Q13753 1193 aa9.64□□□□□ -0.87
VPS13B-206ENST00000496144 ADALQ6DHV7 355 aa9.64□□□□□ -0.87
VPS13B-206ENST00000496144 SASS6Q6UVJ0 657 aa9.64□□□□□ -0.87
VPS13B-206ENST00000496144 KCNG4Q8TDN1 519 aa9.64□□□□□ -0.87
VPS13B-206ENST00000496144 NAP1L4Q99733 375 aaKnown RBP9.64□□□□□ -0.87
VPS13B-206ENST00000496144 C6orf50Q9HD87 102 aa9.64□□□□□ -0.87
VPS13B-206ENST00000496144 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.64□□□□□ -0.87
VPS13B-206ENST00000496144 RASA1P20936 1047 aa9.63□□□□□ -0.87
VPS13B-206ENST00000496144 SSRP1Q08945 709 aaKnown RBP9.63□□□□□ -0.87
VPS13B-206ENST00000496144 MORN1Q5T089 497 aa9.63□□□□□ -0.87
VPS13B-206ENST00000496144 APBB1IPQ7Z5R6 666 aaPredicted RBP9.63□□□□□ -0.87
VPS13B-206ENST00000496144 MAP3K20Q9NYL2 800 aaKnown RBP9.63□□□□□ -0.87
VPS13B-206ENST00000496144 OGDHLQ9ULD0 1010 aa9.63□□□□□ -0.87
VPS13B-206ENST00000496144 MYH6P13533 1939 aa9.63□□□□□ -0.87
VPS13B-206ENST00000496144 RXRAP19793 462 aa9.63□□□□□ -0.87
VPS13B-206ENST00000496144 SLC39A5Q6ZMH5 540 aa9.63□□□□□ -0.87
VPS13B-206ENST00000496144 HEATR3Q7Z4Q2 680 aa9.63□□□□□ -0.87
VPS13B-206ENST00000496144 DGKHQ86XP1 1220 aa9.63□□□□□ -0.87
VPS13B-206ENST00000496144 DNERQ8NFT8 737 aa9.63□□□□□ -0.87
VPS13B-206ENST00000496144 WDR11Q9BZH6 1224 aa9.63□□□□□ -0.87
VPS13B-206ENST00000496144 FGRP09769 529 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms