RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 MYH6P13533 1939 aa21.39■■□□□ 1.01
CLCNKA-207ENST00000495784 E7EWF7 191 aa21.38■■□□□ 1.01
CLCNKA-207ENST00000495784 PITPNM1O00562 1244 aa21.38■■□□□ 1.01
CLCNKA-207ENST00000495784 SGSM2O43147 1006 aa21.38■■□□□ 1.01
CLCNKA-207ENST00000495784 RFC2P35250 354 aa21.38■■□□□ 1.01
CLCNKA-207ENST00000495784 GHRHRQ02643 423 aa21.38■■□□□ 1.01
CLCNKA-207ENST00000495784 PRDM12Q9H4Q4 367 aa21.38■■□□□ 1.01
CLCNKA-207ENST00000495784 DDX41Q9UJV9 622 aaKnown RBP21.38■■□□□ 1.01
CLCNKA-207ENST00000495784 MYCLP12524 364 aaPredicted RBP21.37■■□□□ 1.01
CLCNKA-207ENST00000495784 ACTN1P12814 892 aa21.37■■□□□ 1.01
CLCNKA-207ENST00000495784 HOXA13P31271 388 aaPredicted RBP21.37■■□□□ 1.01
CLCNKA-207ENST00000495784 PTGISQ16647 500 aa21.37■■□□□ 1.01
CLCNKA-207ENST00000495784 DGKDQ16760 1214 aa21.37■■□□□ 1.01
CLCNKA-207ENST00000495784 TMEM67Q5HYA8 995 aa21.37■■□□□ 1.01
CLCNKA-207ENST00000495784 SAMD3Q8N6K7 520 aa21.37■■□□□ 1.01
CLCNKA-207ENST00000495784 VWCEQ96DN2 955 aa21.37■■□□□ 1.01
CLCNKA-207ENST00000495784 PIGSQ96S52 555 aa21.37■■□□□ 1.01
CLCNKA-207ENST00000495784 PDCD2LQ9BRP1 358 aa21.37■■□□□ 1.01
CLCNKA-207ENST00000495784 YBX2Q9Y2T7 364 aaKnown RBP21.37■■□□□ 1.01
CLCNKA-207ENST00000495784 TAF6LQ9Y6J9 622 aa21.37■■□□□ 1.01
CLCNKA-207ENST00000495784 IQCF3P0C7M6 154 aa21.36■■□□□ 1.01
CLCNKA-207ENST00000495784 ATP2A2P16615 1042 aaKnown RBP21.36■■□□□ 1.01
CLCNKA-207ENST00000495784 RABGGTBP53611 331 aa21.36■■□□□ 1.01
CLCNKA-207ENST00000495784 LAMC2Q13753 1193 aa21.36■■□□□ 1.01
CLCNKA-207ENST00000495784 STOX1Q6ZVD7 989 aa21.36■■□□□ 1.01
CLCNKA-207ENST00000495784 CATIPQ7Z7H3 387 aa21.36■■□□□ 1.01
CLCNKA-207ENST00000495784 DHX37Q8IY37 1157 aaKnown RBP21.36■■□□□ 1.01
CLCNKA-207ENST00000495784 CCDC155Q8N6L0 562 aa21.36■■□□□ 1.01
CLCNKA-207ENST00000495784 EMID1Q96A84 441 aaPredicted RBP21.36■■□□□ 1.01
CLCNKA-207ENST00000495784 FTOQ9C0B1 505 aaKnown RBP eCLIP21.36■■□□□ 1.01
CLCNKA-207ENST00000495784 RIOX1Q9H6W3 641 aa21.36■■□□□ 1.01
CLCNKA-207ENST00000495784 SENP2Q9HC62 589 aa21.36■■□□□ 1.01
CLCNKA-207ENST00000495784 GCOM1H8Y6P7 765 aaPredicted RBP21.35■■□□□ 1.01
CLCNKA-207ENST00000495784 POLR2MP0CAP2 368 aa21.35■■□□□ 1.01
CLCNKA-207ENST00000495784 TROAPQ12815 778 aa21.35■■□□□ 1.01
CLCNKA-207ENST00000495784 SLC35G1Q2M3R5 365 aa21.35■■□□□ 1.01
CLCNKA-207ENST00000495784 SESTD1Q86VW0 696 aa21.35■■□□□ 1.01
CLCNKA-207ENST00000495784 USP38Q8NB14 1042 aa21.35■■□□□ 1.01
CLCNKA-207ENST00000495784 KAT2BQ92831 832 aa21.35■■□□□ 1.01
CLCNKA-207ENST00000495784 PCDHA11Q9Y5I1 949 aa21.35■■□□□ 1.01
CLCNKA-207ENST00000495784 PNMA6FA0A0J9YX94 578 aa21.34■■□□□ 1.01
CLCNKA-207ENST00000495784 PPP2R2DQ66LE6 453 aa21.34■■□□□ 1.01
CLCNKA-207ENST00000495784 GDF6Q6KF10 455 aaPredicted RBP21.34■■□□□ 1.01
CLCNKA-207ENST00000495784 KCNV1Q6PIU1 500 aa21.34■■□□□ 1.01
CLCNKA-207ENST00000495784 FCHSD1Q86WN1 690 aa21.34■■□□□ 1.01
CLCNKA-207ENST00000495784 C7orf31Q8N865 590 aa21.34■■□□□ 1.01
CLCNKA-207ENST00000495784 PPTC7Q8NI37 304 aa21.34■■□□□ 1.01
CLCNKA-207ENST00000495784 CAGE1Q8TC20 777 aa21.34■■□□□ 1.01
CLCNKA-207ENST00000495784 MAP4K1Q92918 833 aa21.34■■□□□ 1.01
CLCNKA-207ENST00000495784 KATNAL1Q9BW62 490 aa21.34■■□□□ 1.01
CLCNKA-207ENST00000495784 RBM8AQ9Y5S9 174 aaKnown RBP21.34■■□□□ 1.01
CLCNKA-207ENST00000495784 PRUNE2Q8WUY3 3088 aa21.33■■□□□ 1.01
CLCNKA-207ENST00000495784 CYTH3O43739 400 aa21.33■■□□□ 1.01
CLCNKA-207ENST00000495784 CCND2P30279 289 aa21.33■■□□□ 1.01
CLCNKA-207ENST00000495784 PGM5Q15124 567 aa21.33■■□□□ 1.01
CLCNKA-207ENST00000495784 VSIG10LQ86VR7 867 aa21.33■■□□□ 1.01
CLCNKA-207ENST00000495784 PPM1EQ8WY54 764 aa21.33■■□□□ 1.01
CLCNKA-207ENST00000495784 KIAA1217Q5T5P2 1943 aa21.33■■□□□ 1
CLCNKA-207ENST00000495784 ZNF286BP0CG31 522 aa21.32■■□□□ 1
CLCNKA-207ENST00000495784 MYOGP15173 224 aa21.32■■□□□ 1
CLCNKA-207ENST00000495784 IGFBP4P22692 258 aa21.32■■□□□ 1
CLCNKA-207ENST00000495784 PSEN2P49810 448 aa21.32■■□□□ 1
CLCNKA-207ENST00000495784 ANTXR2P58335 489 aa21.32■■□□□ 1
CLCNKA-207ENST00000495784 MFSD10Q14728 455 aa21.32■■□□□ 1
CLCNKA-207ENST00000495784 MB21D2Q8IYB1 491 aaPredicted RBP21.32■■□□□ 1
CLCNKA-207ENST00000495784 IL31RAQ8NI17 732 aa21.32■■□□□ 1
CLCNKA-207ENST00000495784 AFAP1L1Q8TED9 768 aa21.32■■□□□ 1
CLCNKA-207ENST00000495784 PIBF1Q8WXW3 757 aa21.32■■□□□ 1
CLCNKA-207ENST00000495784 ALG1Q9BT22 464 aa21.32■■□□□ 1
CLCNKA-207ENST00000495784 HDAC6Q9UBN7 1215 aa21.32■■□□□ 1
CLCNKA-207ENST00000495784 GTF2IRD1Q9UHL9 959 aa21.32■■□□□ 1
CLCNKA-207ENST00000495784 SORBS3O60504 671 aa21.31■■□□□ 1
CLCNKA-207ENST00000495784 RGS20O76081 388 aa21.31■■□□□ 1
CLCNKA-207ENST00000495784 GGPS1O95749 300 aa21.31■■□□□ 1
CLCNKA-207ENST00000495784 F2P00734 622 aa21.31■■□□□ 1
CLCNKA-207ENST00000495784 ADGRE1Q14246 886 aa21.31■■□□□ 1
CLCNKA-207ENST00000495784 KIAA0753Q2KHM9 967 aa21.31■■□□□ 1
CLCNKA-207ENST00000495784 CELF3Q5SZQ8 465 aaKnown RBP21.31■■□□□ 1
CLCNKA-207ENST00000495784 MYSM1Q5VVJ2 828 aa21.31■■□□□ 1
CLCNKA-207ENST00000495784 CASC1Q6TDU7 716 aa21.31■■□□□ 1
CLCNKA-207ENST00000495784 CTCFLQ8NI51 663 aaPredicted RBP21.31■■□□□ 1
CLCNKA-207ENST00000495784 IGDCC4Q8TDY8 1250 aa21.31■■□□□ 1
CLCNKA-207ENST00000495784 SPATA33Q96N06 139 aa21.31■■□□□ 1
CLCNKA-207ENST00000495784 CTAGE1Q96RT6 745 aa21.31■■□□□ 1
CLCNKA-207ENST00000495784 SLC9A7Q96T83 725 aa21.31■■□□□ 1
CLCNKA-207ENST00000495784 SCN5AQ14524 2016 aa21.3■■□□□ 1
CLCNKA-207ENST00000495784 PPFIA4O75335 1185 aa21.3■■□□□ 1
CLCNKA-207ENST00000495784 TGFB3P10600 412 aa21.3■■□□□ 1
CLCNKA-207ENST00000495784 SELPP16109 830 aa21.3■■□□□ 1
CLCNKA-207ENST00000495784 KIF5BP33176 963 aa21.3■■□□□ 1
CLCNKA-207ENST00000495784 LRRC8DQ7L1W4 858 aa21.3■■□□□ 1
CLCNKA-207ENST00000495784 PHOSPHO2Q8TCD6 241 aa21.3■■□□□ 1
CLCNKA-207ENST00000495784 ZFP91Q96JP5 570 aaPredicted RBP21.3■■□□□ 1
CLCNKA-207ENST00000495784 CHD9Q3L8U1 2897 aa21.29■■□□□ 1
CLCNKA-207ENST00000495784 GBF1Q92538 1859 aa21.29■■□□□ 1
CLCNKA-207ENST00000495784 TANC1Q9C0D5 1861 aa21.29■■□□□ 1
CLCNKA-207ENST00000495784 DDAH1O94760 285 aa21.29■■□□□ 1
CLCNKA-207ENST00000495784 BAIAP3O94812 1187 aa21.29■■□□□ 1
CLCNKA-207ENST00000495784 UBA1P22314 1058 aaKnown RBP21.29■■□□□ 1
CLCNKA-207ENST00000495784 HSDL1Q3SXM5 330 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms