RNA–Protein interactions for RNA: ENST00000495749.1

TM9SF4-207, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 3,023 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-207ENST00000495749 KANSL2Q9H9L4 492 aa10.14□□□□□ -0.79
TM9SF4-207ENST00000495749 PSD3Q9NYI0 1048 aa10.14□□□□□ -0.79
TM9SF4-207ENST00000495749 MYO1AQ9UBC5 1043 aa10.14□□□□□ -0.79
TM9SF4-207ENST00000495749 LRWD1Q9UFC0 647 aa10.14□□□□□ -0.79
TM9SF4-207ENST00000495749 FEZ2Q9UHY8 353 aaPredicted RBP10.14□□□□□ -0.79
TM9SF4-207ENST00000495749 LCMT1Q9UIC8 334 aa10.14□□□□□ -0.79
TM9SF4-207ENST00000495749 NHSQ6T4R5 1651 aa10.14□□□□□ -0.79
TM9SF4-207ENST00000495749 LRRIQ3A6PVS8 624 aaPredicted RBP10.13□□□□□ -0.79
TM9SF4-207ENST00000495749 SRGAP2O75044 1071 aa10.13□□□□□ -0.79
TM9SF4-207ENST00000495749 LONP1P36776 959 aaKnown RBP10.13□□□□□ -0.79
TM9SF4-207ENST00000495749 TUBB4BP68371 445 aa10.13□□□□□ -0.79
TM9SF4-207ENST00000495749 ICA1Q05084 483 aa10.13□□□□□ -0.79
TM9SF4-207ENST00000495749 STK4Q13043 487 aa10.13□□□□□ -0.79
TM9SF4-207ENST00000495749 TRIM14Q14142 442 aa10.13□□□□□ -0.79
TM9SF4-207ENST00000495749 IRF2BP1Q8IU81 584 aa10.13□□□□□ -0.79
TM9SF4-207ENST00000495749 OR8K1Q8NGG5 319 aa10.13□□□□□ -0.79
TM9SF4-207ENST00000495749 CDK5RAP3Q96JB5 506 aa10.13□□□□□ -0.79
TM9SF4-207ENST00000495749 TRIM47Q96LD4 638 aa10.13□□□□□ -0.79
TM9SF4-207ENST00000495749 PCMTD1Q96MG8 357 aaPredicted RBP10.13□□□□□ -0.79
TM9SF4-207ENST00000495749 CWC15Q9P013 229 aaKnown RBP10.13□□□□□ -0.79
TM9SF4-207ENST00000495749 LUC7L2Q9Y383 392 aaKnown RBP10.13□□□□□ -0.79
TM9SF4-207ENST00000495749 QRICH1Q2TAL8 776 aa10.13□□□□□ -0.79
TM9SF4-207ENST00000495749 LEKR1Q6ZMV7 388 aa10.13□□□□□ -0.79
TM9SF4-207ENST00000495749 KRT25Q7Z3Z0 450 aa10.13□□□□□ -0.79
TM9SF4-207ENST00000495749 KCNK18Q7Z418 384 aa10.13□□□□□ -0.79
TM9SF4-207ENST00000495749 UPF1Q92900 1129 aaKnown RBP eCLIP10.13□□□□□ -0.793e-13■■■■■ 54.4
TM9SF4-207ENST00000495749 CAPZA3Q96KX2 299 aa10.13□□□□□ -0.79
TM9SF4-207ENST00000495749 GBP3Q9H0R5 595 aa10.13□□□□□ -0.79
TM9SF4-207ENST00000495749 F5H6K3 240 aa10.12□□□□□ -0.79
TM9SF4-207ENST00000495749 TRIM66O15016 1216 aa10.12□□□□□ -0.79
TM9SF4-207ENST00000495749 KLRC3Q07444 240 aa10.12□□□□□ -0.79
TM9SF4-207ENST00000495749 TSR1Q2NL82 804 aaKnown RBP10.12□□□□□ -0.79
TM9SF4-207ENST00000495749 CCDC122Q5T0U0 273 aa10.12□□□□□ -0.79
TM9SF4-207ENST00000495749 C10orf67Q8IYJ2 551 aa10.12□□□□□ -0.79
TM9SF4-207ENST00000495749 ACER1Q8TDN7 264 aa10.12□□□□□ -0.79
TM9SF4-207ENST00000495749 TBC1D5Q92609 795 aa10.12□□□□□ -0.79
TM9SF4-207ENST00000495749 GDAP1L1Q96MZ0 367 aa10.12□□□□□ -0.79
TM9SF4-207ENST00000495749 SH3GLB2Q9NR46 395 aa10.12□□□□□ -0.79
TM9SF4-207ENST00000495749 RMND1Q9NWS8 449 aa10.12□□□□□ -0.79
TM9SF4-207ENST00000495749 STK32BQ9NY57 414 aa10.12□□□□□ -0.79
TM9SF4-207ENST00000495749 A0A1B0GUL6 1792 aa10.12□□□□□ -0.79
TM9SF4-207ENST00000495749 RGPD3A6NKT7 1758 aaPredicted RBP10.12□□□□□ -0.79
TM9SF4-207ENST00000495749 RGPD4Q7Z3J3 1758 aa10.12□□□□□ -0.79
TM9SF4-207ENST00000495749 MEIS1O00470 390 aa10.12□□□□□ -0.79
TM9SF4-207ENST00000495749 ATP1A1P05023 1023 aaKnown RBP10.12□□□□□ -0.79
TM9SF4-207ENST00000495749 KLK7P49862 253 aa10.12□□□□□ -0.79
TM9SF4-207ENST00000495749 DGKZQ13574 1117 aa10.12□□□□□ -0.79
TM9SF4-207ENST00000495749 CCDC174Q6PII3 467 aa10.12□□□□□ -0.79
TM9SF4-207ENST00000495749 MB21D1Q8N884 522 aa10.12□□□□□ -0.79
TM9SF4-207ENST00000495749 CYP2W1Q8TAV3 490 aa10.12□□□□□ -0.79
TM9SF4-207ENST00000495749 SNX29Q8TEQ0 813 aa10.12□□□□□ -0.79
TM9SF4-207ENST00000495749 RIOX1Q9H6W3 641 aa10.12□□□□□ -0.79
TM9SF4-207ENST00000495749 PI4KBQ9UBF8 816 aa10.12□□□□□ -0.79
TM9SF4-207ENST00000495749 FZD1Q9UP38 647 aa10.12□□□□□ -0.79
TM9SF4-207ENST00000495749 ROBO3Q96MS0 1386 aa10.12□□□□□ -0.79
TM9SF4-207ENST00000495749 NPHP3-ACAD11A0A0J9YXS1 232 aa10.12□□□□□ -0.79
TM9SF4-207ENST00000495749 A0A1W2PRG0 241 aa10.12□□□□□ -0.79
TM9SF4-207ENST00000495749 H7C1D1 291 aa10.12□□□□□ -0.79
TM9SF4-207ENST00000495749 MYO1CO00159 1063 aa10.12□□□□□ -0.79
TM9SF4-207ENST00000495749 EDIL3O43854 480 aa10.12□□□□□ -0.79
TM9SF4-207ENST00000495749 ZMYND10O75800 440 aa10.12□□□□□ -0.79
TM9SF4-207ENST00000495749 TNNT3P45378 269 aaPredicted RBP10.12□□□□□ -0.79
TM9SF4-207ENST00000495749 ABCB5Q2M3G0 1257 aa10.12□□□□□ -0.79
TM9SF4-207ENST00000495749 TRAPPC11Q7Z392 1133 aa10.12□□□□□ -0.79
TM9SF4-207ENST00000495749 SIAH1Q8IUQ4 282 aa10.12□□□□□ -0.79
TM9SF4-207ENST00000495749 MMS19Q96T76 1030 aa10.12□□□□□ -0.79
TM9SF4-207ENST00000495749 LZTS2Q9BRK4 669 aa10.12□□□□□ -0.79
TM9SF4-207ENST00000495749 PYM1Q9BRP8 204 aaKnown RBP10.12□□□□□ -0.79
TM9SF4-207ENST00000495749 TMEM39BQ9GZU3 492 aa10.12□□□□□ -0.79
TM9SF4-207ENST00000495749 TAF1LQ8IZX4 1826 aa10.11□□□□□ -0.79
TM9SF4-207ENST00000495749 DPEP1P16444 411 aa10.11□□□□□ -0.79
TM9SF4-207ENST00000495749 ECM1Q16610 540 aa10.11□□□□□ -0.79
TM9SF4-207ENST00000495749 STRIP1Q5VSL9 837 aa10.11□□□□□ -0.79
TM9SF4-207ENST00000495749 PRAMEF18Q5VWM3 479 aa10.11□□□□□ -0.79
TM9SF4-207ENST00000495749 ARL6IP4Q66PJ3 421 aaKnown RBP10.11□□□□□ -0.79
TM9SF4-207ENST00000495749 FOXR1Q6PIV2 292 aa10.11□□□□□ -0.79
TM9SF4-207ENST00000495749 WDR59Q6PJI9 974 aa10.11□□□□□ -0.79
TM9SF4-207ENST00000495749 HHIPL2Q6UWX4 724 aa10.11□□□□□ -0.79
TM9SF4-207ENST00000495749 ADSSL1Q8N142 457 aa10.11□□□□□ -0.79
TM9SF4-207ENST00000495749 ZDHHC15Q96MV8 337 aa10.11□□□□□ -0.79
TM9SF4-207ENST00000495749 MMTAG2Q9BU76 263 aaKnown RBP10.11□□□□□ -0.79
TM9SF4-207ENST00000495749 HAUS4Q9H6D7 363 aa10.11□□□□□ -0.79
TM9SF4-207ENST00000495749 PKD2L1Q9P0L9 805 aa10.11□□□□□ -0.79
TM9SF4-207ENST00000495749 SAR1BQ9Y6B6 198 aa10.11□□□□□ -0.79
TM9SF4-207ENST00000495749 PNMA6FA0A0J9YX94 578 aa10.11□□□□□ -0.79
TM9SF4-207ENST00000495749 LGALS16A8MUM7 142 aa10.11□□□□□ -0.79
TM9SF4-207ENST00000495749 PSMD14O00487 310 aa10.11□□□□□ -0.79
TM9SF4-207ENST00000495749 HERVK_113P62684 666 aa10.11□□□□□ -0.79
TM9SF4-207ENST00000495749 CYP4A11Q02928 519 aa10.11□□□□□ -0.79
TM9SF4-207ENST00000495749 CDC37Q16543 378 aaPredicted RBP10.11□□□□□ -0.79
TM9SF4-207ENST00000495749 ASPRV1Q53RT3 343 aa10.11□□□□□ -0.79
TM9SF4-207ENST00000495749 PRR16Q569H4 304 aa10.11□□□□□ -0.79
TM9SF4-207ENST00000495749 KIAA1328Q86T90 577 aa10.11□□□□□ -0.79
TM9SF4-207ENST00000495749 GLIS2Q9BZE0 524 aaPredicted RBP10.11□□□□□ -0.79
TM9SF4-207ENST00000495749 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.11□□□□□ -0.79
TM9SF4-207ENST00000495749 AGPAT5Q9NUQ2 364 aa10.11□□□□□ -0.79
TM9SF4-207ENST00000495749 DDX25Q9UHL0 483 aaKnown RBP10.11□□□□□ -0.79
TM9SF4-207ENST00000495749 B4DLN1 442 aa10.1□□□□□ -0.79
TM9SF4-207ENST00000495749 E9PMD0 336 aa10.1□□□□□ -0.79
TM9SF4-207ENST00000495749 ZBTB5O15062 677 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms