RNA–Protein interactions for RNA: ENST00000495680.2

SHROOM1-206, Transcript of shroom family member 1, humanhuman

TSL 3

Gene SHROOM1, Length 281 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-206ENST00000495680 NSUN6Q8TEA1 469 aaKnown RBP14.08□□□□□ -0.16
SHROOM1-206ENST00000495680 ARNTL2Q8WYA1 636 aa14.08□□□□□ -0.16
SHROOM1-206ENST00000495680 SLC9A7Q96T83 725 aa14.08□□□□□ -0.16
SHROOM1-206ENST00000495680 UHRF1Q96T88 793 aaPredicted RBP14.08□□□□□ -0.16
SHROOM1-206ENST00000495680 RMDN3Q96TC7 470 aa14.08□□□□□ -0.16
SHROOM1-206ENST00000495680 OSBPL3Q9H4L5 887 aa14.08□□□□□ -0.16
SHROOM1-206ENST00000495680 NOD1Q9Y239 953 aa14.08□□□□□ -0.16
SHROOM1-206ENST00000495680 MTCH2Q9Y6C9 303 aa14.08□□□□□ -0.16
SHROOM1-206ENST00000495680 TRANK1O15050 2925 aa14.07□□□□□ -0.16
SHROOM1-206ENST00000495680 LCHNA4D1U4 455 aa14.07□□□□□ -0.16
SHROOM1-206ENST00000495680 DHX16O60231 1041 aaKnown RBP14.07□□□□□ -0.16
SHROOM1-206ENST00000495680 ACTN1P12814 892 aa14.07□□□□□ -0.16
SHROOM1-206ENST00000495680 KCNQ1P51787 676 aa14.07□□□□□ -0.16
SHROOM1-206ENST00000495680 MFAP1P55081 439 aaKnown RBP14.07□□□□□ -0.16
SHROOM1-206ENST00000495680 BFSP2Q13515 415 aa14.07□□□□□ -0.16
SHROOM1-206ENST00000495680 SLC35G1Q2M3R5 365 aa14.07□□□□□ -0.16
SHROOM1-206ENST00000495680 ASPRV1Q53RT3 343 aa14.07□□□□□ -0.16
SHROOM1-206ENST00000495680 SESTD1Q86VW0 696 aa14.07□□□□□ -0.16
SHROOM1-206ENST00000495680 WNT8BQ93098 351 aa14.07□□□□□ -0.16
SHROOM1-206ENST00000495680 DIAPH3Q9NSV4 1193 aa14.07□□□□□ -0.16
SHROOM1-206ENST00000495680 HDAC6Q9UBN7 1215 aa14.07□□□□□ -0.16
SHROOM1-206ENST00000495680 DDX41Q9UJV9 622 aaKnown RBP14.07□□□□□ -0.16
SHROOM1-206ENST00000495680 COL4A4P53420 1690 aaPredicted RBP14.07□□□□□ -0.16
SHROOM1-206ENST00000495680 MYH7BA7E2Y1 1941 aa14.06□□□□□ -0.16
SHROOM1-206ENST00000495680 B4DLN1 442 aa14.06□□□□□ -0.16
SHROOM1-206ENST00000495680 SORBS3O60504 671 aa14.06□□□□□ -0.16
SHROOM1-206ENST00000495680 PARP1P09874 1014 aaKnown RBP14.06□□□□□ -0.16
SHROOM1-206ENST00000495680 ZNF286BP0CG31 522 aa14.06□□□□□ -0.16
SHROOM1-206ENST00000495680 BMP1P13497 986 aa14.06□□□□□ -0.16
SHROOM1-206ENST00000495680 MRPL12P52815 198 aaKnown RBP14.06□□□□□ -0.16
SHROOM1-206ENST00000495680 DEFB103AP81534 67 aa14.06□□□□□ -0.16
SHROOM1-206ENST00000495680 HIC1Q14526 733 aa14.06□□□□□ -0.16
SHROOM1-206ENST00000495680 STXBP2Q15833 593 aa14.06□□□□□ -0.16
SHROOM1-206ENST00000495680 CYB5R4Q7L1T6 521 aa14.06□□□□□ -0.16
SHROOM1-206ENST00000495680 FBXO11Q86XK2 927 aa14.06□□□□□ -0.16
SHROOM1-206ENST00000495680 PHOSPHO2Q8TCD6 241 aa14.06□□□□□ -0.16
SHROOM1-206ENST00000495680 ZFP91Q96JP5 570 aaPredicted RBP14.06□□□□□ -0.16
SHROOM1-206ENST00000495680 ALG1Q9BT22 464 aa14.06□□□□□ -0.16
SHROOM1-206ENST00000495680 DSCC1Q9BVC3 393 aa14.06□□□□□ -0.16
SHROOM1-206ENST00000495680 RWDD1Q9H446 243 aaPredicted RBP14.06□□□□□ -0.16
SHROOM1-206ENST00000495680 PXMP2Q9NR77 195 aa14.06□□□□□ -0.16
SHROOM1-206ENST00000495680 BDP1A6H8Y1 2624 aa14.06□□□□□ -0.16
SHROOM1-206ENST00000495680 LPXNO60711 386 aa14.05□□□□□ -0.16
SHROOM1-206ENST00000495680 NBNO60934 754 aa14.05□□□□□ -0.16
SHROOM1-206ENST00000495680 RGS20O76081 388 aa14.05□□□□□ -0.16
SHROOM1-206ENST00000495680 CFBP00751 764 aa14.05□□□□□ -0.16
SHROOM1-206ENST00000495680 NR3C2P08235 984 aa14.05□□□□□ -0.16
SHROOM1-206ENST00000495680 POU3F3P20264 500 aaPredicted RBP14.05□□□□□ -0.16
SHROOM1-206ENST00000495680 COL9A1P20849 921 aa14.05□□□□□ -0.16
SHROOM1-206ENST00000495680 WDR5P61964 334 aaKnown RBP14.05□□□□□ -0.16
SHROOM1-206ENST00000495680 ZNF200P98182 395 aaPredicted RBP14.05□□□□□ -0.16
SHROOM1-206ENST00000495680 SEC23AQ15436 765 aa14.05□□□□□ -0.16
SHROOM1-206ENST00000495680 SKIV2LQ15477 1246 aaKnown RBP14.05□□□□□ -0.16
SHROOM1-206ENST00000495680 ARHGEF16Q5VV41 709 aa14.05□□□□□ -0.16
SHROOM1-206ENST00000495680 TRAF7Q6Q0C0 670 aa14.05□□□□□ -0.16
SHROOM1-206ENST00000495680 LRRC8DQ7L1W4 858 aa14.05□□□□□ -0.16
SHROOM1-206ENST00000495680 MCF2L2Q86YR7 1114 aa14.05□□□□□ -0.16
SHROOM1-206ENST00000495680 IL31RAQ8NI17 732 aa14.05□□□□□ -0.16
SHROOM1-206ENST00000495680 EXOC6Q8TAG9 804 aa14.05□□□□□ -0.16
SHROOM1-206ENST00000495680 AFAP1L1Q8TED9 768 aa14.05□□□□□ -0.16
SHROOM1-206ENST00000495680 IWS1Q96ST2 819 aa14.05□□□□□ -0.16
SHROOM1-206ENST00000495680 GTF2IRD1Q9UHL9 959 aa14.05□□□□□ -0.16
SHROOM1-206ENST00000495680 MRPL11Q9Y3B7 192 aaKnown RBP14.05□□□□□ -0.16
SHROOM1-206ENST00000495680 EIF3JO75822 258 aaKnown RBP14.04□□□□□ -0.16
SHROOM1-206ENST00000495680 BAIAP3O94812 1187 aa14.04□□□□□ -0.16
SHROOM1-206ENST00000495680 F2P00734 622 aa14.04□□□□□ -0.16
SHROOM1-206ENST00000495680 CKBP12277 381 aa14.04□□□□□ -0.16
SHROOM1-206ENST00000495680 SELPP16109 830 aa14.04□□□□□ -0.16
SHROOM1-206ENST00000495680 CASTP20810 708 aaKnown RBP14.04□□□□□ -0.16
SHROOM1-206ENST00000495680 HOXA13P31271 388 aaPredicted RBP14.04□□□□□ -0.16
SHROOM1-206ENST00000495680 PSEN2P49810 448 aa14.04□□□□□ -0.16
SHROOM1-206ENST00000495680 HSD17B4P51659 736 aa14.04□□□□□ -0.16
SHROOM1-206ENST00000495680 GRB10Q13322 594 aa14.04□□□□□ -0.16
SHROOM1-206ENST00000495680 MBTPS1Q14703 1052 aa14.04□□□□□ -0.16
SHROOM1-206ENST00000495680 MFSD10Q14728 455 aa14.04□□□□□ -0.16
SHROOM1-206ENST00000495680 DGKDQ16760 1214 aa14.04□□□□□ -0.16
SHROOM1-206ENST00000495680 IMMTQ16891 758 aaKnown RBP14.04□□□□□ -0.16
SHROOM1-206ENST00000495680 TRIM71Q2Q1W2 868 aaKnown RBP14.04□□□□□ -0.16
SHROOM1-206ENST00000495680 CCDC178Q5BJE1 867 aa14.04□□□□□ -0.16
SHROOM1-206ENST00000495680 CAGE1Q8TC20 777 aa14.04□□□□□ -0.16
SHROOM1-206ENST00000495680 GPKOWQ92917 476 aaPredicted RBP eCLIP14.04□□□□□ -0.16
SHROOM1-206ENST00000495680 EMID1Q96A84 441 aaPredicted RBP14.04□□□□□ -0.16
SHROOM1-206ENST00000495680 MTMR8Q96EF0 704 aa14.04□□□□□ -0.16
SHROOM1-206ENST00000495680 SENP2Q9HC62 589 aa14.04□□□□□ -0.16
SHROOM1-206ENST00000495680 MRVI1Q9Y6F6 885 aa14.04□□□□□ -0.16
SHROOM1-206ENST00000495680 BAZ2BQ9UIF8 2168 aaKnown RBP14.04□□□□□ -0.16
SHROOM1-206ENST00000495680 KLRF2D3W0D1 207 aa14.03□□□□□ -0.16
SHROOM1-206ENST00000495680 HAS3O00219 553 aa14.03□□□□□ -0.16
SHROOM1-206ENST00000495680 TLL1O43897 1013 aa14.03□□□□□ -0.16
SHROOM1-206ENST00000495680 MYCLP12524 364 aaPredicted RBP14.03□□□□□ -0.16
SHROOM1-206ENST00000495680 SP2Q02086 613 aa14.03□□□□□ -0.16
SHROOM1-206ENST00000495680 GHRHRQ02643 423 aa14.03□□□□□ -0.16
SHROOM1-206ENST00000495680 RBL2Q08999 1139 aa14.03□□□□□ -0.16
SHROOM1-206ENST00000495680 KIAA0753Q2KHM9 967 aa14.03□□□□□ -0.16
SHROOM1-206ENST00000495680 IFIT1BQ5T764 474 aaKnown RBP14.03□□□□□ -0.16
SHROOM1-206ENST00000495680 C7orf31Q8N865 590 aa14.03□□□□□ -0.16
SHROOM1-206ENST00000495680 PDCD2LQ9BRP1 358 aa14.03□□□□□ -0.16
SHROOM1-206ENST00000495680 UBAC1Q9BSL1 405 aa14.03□□□□□ -0.16
SHROOM1-206ENST00000495680 AMNQ9BXJ7 453 aa14.03□□□□□ -0.16
SHROOM1-206ENST00000495680 KRT23Q9C075 422 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms