RNA–Protein interactions for RNA: ENST00000494942.5

UBXN11-215, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,325 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-215ENST00000494942 USP17L5A8MUK1 530 aa16.52■□□□□ 0.23
UBXN11-215ENST00000494942 ATP2B4P23634 1241 aa16.52■□□□□ 0.23
UBXN11-215ENST00000494942 RFC4P35249 363 aa16.52■□□□□ 0.23
UBXN11-215ENST00000494942 KIF11P52732 1056 aa16.52■□□□□ 0.23
UBXN11-215ENST00000494942 KRT79Q5XKE5 535 aa16.52■□□□□ 0.23
UBXN11-215ENST00000494942 CCNI2Q6ZMN8 369 aaPredicted RBP16.52■□□□□ 0.23
UBXN11-215ENST00000494942 PTF1AQ7RTS3 328 aa16.52■□□□□ 0.23
UBXN11-215ENST00000494942 PROM2Q8N271 834 aa16.52■□□□□ 0.23
UBXN11-215ENST00000494942 MMGT1Q8N4V1 131 aa16.52■□□□□ 0.23
UBXN11-215ENST00000494942 ALS2CR12Q96Q35 445 aa16.52■□□□□ 0.23
UBXN11-215ENST00000494942 TSG101Q99816 390 aa16.52■□□□□ 0.23
UBXN11-215ENST00000494942 RNF216Q9NWF9 866 aaPredicted RBP16.52■□□□□ 0.23
UBXN11-215ENST00000494942 TMEM260Q9NX78 707 aa16.52■□□□□ 0.23
UBXN11-215ENST00000494942 PLIN4Q96Q06 1357 aa16.52■□□□□ 0.23
UBXN11-215ENST00000494942 PDHBP11177 359 aa16.51■□□□□ 0.23
UBXN11-215ENST00000494942 RHBDL3P58872 404 aa16.51■□□□□ 0.23
UBXN11-215ENST00000494942 SEPT2Q15019 361 aa16.51■□□□□ 0.23
UBXN11-215ENST00000494942 CNBD1Q8NA66 436 aa16.51■□□□□ 0.23
UBXN11-215ENST00000494942 UBA5Q9GZZ9 404 aa16.51■□□□□ 0.23
UBXN11-215ENST00000494942 MMRN2Q9H8L6 949 aa16.51■□□□□ 0.23
UBXN11-215ENST00000494942 FAM207AQ9NSI2 230 aaPredicted RBP16.51■□□□□ 0.23
UBXN11-215ENST00000494942 PDE2AO00408 941 aaPredicted RBP16.51■□□□□ 0.23
UBXN11-215ENST00000494942 ZNF185O15231 689 aa16.51■□□□□ 0.23
UBXN11-215ENST00000494942 AKR1B10O60218 316 aa16.51■□□□□ 0.23
UBXN11-215ENST00000494942 TCP1P17987 556 aaKnown RBP16.51■□□□□ 0.23
UBXN11-215ENST00000494942 IRX5P78411 483 aaPredicted RBP16.51■□□□□ 0.23
UBXN11-215ENST00000494942 PPP1R18Q6NYC8 613 aa16.51■□□□□ 0.23
UBXN11-215ENST00000494942 ILDR2Q71H61 639 aa16.51■□□□□ 0.23
UBXN11-215ENST00000494942 TBC1D22AQ8WUA7 517 aa16.51■□□□□ 0.23
UBXN11-215ENST00000494942 GAKO14976 1311 aa16.5■□□□□ 0.23
UBXN11-215ENST00000494942 RNF40O75150 1001 aa16.5■□□□□ 0.23
UBXN11-215ENST00000494942 PLEKP08567 350 aaPredicted RBP16.5■□□□□ 0.23
UBXN11-215ENST00000494942 EIF4A3P38919 411 aaKnown RBP16.5■□□□□ 0.23
UBXN11-215ENST00000494942 GPSM2P81274 684 aa16.5■□□□□ 0.23
UBXN11-215ENST00000494942 EHHADHQ08426 723 aa16.5■□□□□ 0.23
UBXN11-215ENST00000494942 PPP4R3AQ6IN85 833 aa16.5■□□□□ 0.23
UBXN11-215ENST00000494942 DYMQ7RTS9 669 aa16.5■□□□□ 0.23
UBXN11-215ENST00000494942 KRT26Q7Z3Y9 468 aa16.5■□□□□ 0.23
UBXN11-215ENST00000494942 CREG2Q8IUH2 290 aa16.5■□□□□ 0.23
UBXN11-215ENST00000494942 CRACR2AQ9BSW2 395 aa16.5■□□□□ 0.23
UBXN11-215ENST00000494942 FAM204AQ9H8W3 233 aa16.5■□□□□ 0.23
UBXN11-215ENST00000494942 BTAF1O14981 1849 aa16.5■□□□□ 0.23
UBXN11-215ENST00000494942 SLC37A4O43826 429 aa16.5■□□□□ 0.23
UBXN11-215ENST00000494942 PHACTR2O75167 634 aa16.5■□□□□ 0.23
UBXN11-215ENST00000494942 UFL1O94874 794 aa16.5■□□□□ 0.23
UBXN11-215ENST00000494942 TRIM37O94972 964 aa16.5■□□□□ 0.23
UBXN11-215ENST00000494942 SYF2O95926 243 aaKnown RBP16.5■□□□□ 0.23
UBXN11-215ENST00000494942 TMEM119Q4V9L6 283 aa16.5■□□□□ 0.23
UBXN11-215ENST00000494942 TRAPPC3LQ5T215 181 aa16.5■□□□□ 0.23
UBXN11-215ENST00000494942 LRRC55Q6ZSA7 311 aa16.5■□□□□ 0.23
UBXN11-215ENST00000494942 SNX29Q8TEQ0 813 aa16.5■□□□□ 0.23
UBXN11-215ENST00000494942 RPGRQ92834 1020 aaKnown RBP16.5■□□□□ 0.23
UBXN11-215ENST00000494942 NUCKS1Q9H1E3 243 aaKnown RBP16.5■□□□□ 0.23
UBXN11-215ENST00000494942 MTMR4Q9NYA4 1195 aa16.5■□□□□ 0.23
UBXN11-215ENST00000494942 GGA1Q9UJY5 639 aa16.5■□□□□ 0.23
UBXN11-215ENST00000494942 A0A0U1RQG5 324 aaPredicted RBP16.49■□□□□ 0.23
UBXN11-215ENST00000494942 NKRFO15226 690 aaKnown RBP eCLIP16.49■□□□□ 0.23
UBXN11-215ENST00000494942 PJA2O43164 708 aa16.49■□□□□ 0.23
UBXN11-215ENST00000494942 RRAGAQ7L523 313 aa16.49■□□□□ 0.23
UBXN11-215ENST00000494942 DDX12PQ92771 950 aa16.49■□□□□ 0.23
UBXN11-215ENST00000494942 GPR101Q96P66 508 aaPredicted RBP16.49■□□□□ 0.23
UBXN11-215ENST00000494942 FAM184BQ9ULE4 1060 aa16.49■□□□□ 0.23
UBXN11-215ENST00000494942 CAPN6Q9Y6Q1 641 aa16.49■□□□□ 0.23
UBXN11-215ENST00000494942 SSU72P8A0A1W2PR75 194 aa16.48■□□□□ 0.23
UBXN11-215ENST00000494942 LRRC53A6NM62 1247 aa16.48■□□□□ 0.23
UBXN11-215ENST00000494942 EPHB6O15197 1021 aa16.48■□□□□ 0.23
UBXN11-215ENST00000494942 TDP2O95551 362 aa16.48■□□□□ 0.23
UBXN11-215ENST00000494942 SNHG28P0DPA3 235 aa16.48■□□□□ 0.23
UBXN11-215ENST00000494942 MAPK8IP2Q13387 824 aaPredicted RBP16.48■□□□□ 0.23
UBXN11-215ENST00000494942 MFSD14BQ5SR56 506 aa16.48■□□□□ 0.23
UBXN11-215ENST00000494942 CCDC155Q8N6L0 562 aa16.48■□□□□ 0.23
UBXN11-215ENST00000494942 AFAP1L1Q8TED9 768 aa16.48■□□□□ 0.23
UBXN11-215ENST00000494942 BAP1Q92560 729 aa16.48■□□□□ 0.23
UBXN11-215ENST00000494942 SELENOOQ9BVL4 669 aa16.48■□□□□ 0.23
UBXN11-215ENST00000494942 HYOU1Q9Y4L1 999 aa16.48■□□□□ 0.23
UBXN11-215ENST00000494942 FRMPD2Q68DX3 1309 aaPredicted RBP16.48■□□□□ 0.23
UBXN11-215ENST00000494942 POTEMA6NI47 508 aa16.48■□□□□ 0.23
UBXN11-215ENST00000494942 PRPF6O94906 941 aaKnown RBP16.48■□□□□ 0.23
UBXN11-215ENST00000494942 MAGEA1P43355 309 aa16.48■□□□□ 0.23
UBXN11-215ENST00000494942 C2orf54Q08AI8 447 aa16.48■□□□□ 0.23
UBXN11-215ENST00000494942 CACNA2D4Q7Z3S7 1137 aa16.48■□□□□ 0.23
UBXN11-215ENST00000494942 AMIGO3Q86WK7 504 aa16.48■□□□□ 0.23
UBXN11-215ENST00000494942 MYOCDQ8IZQ8 938 aa16.48■□□□□ 0.23
UBXN11-215ENST00000494942 RNF10Q8N5U6 811 aaKnown RBP16.48■□□□□ 0.23
UBXN11-215ENST00000494942 COA7Q96BR5 231 aa16.48■□□□□ 0.23
UBXN11-215ENST00000494942 ZC3H4Q9UPT8 1303 aaKnown RBP16.47■□□□□ 0.23
UBXN11-215ENST00000494942 PNMA6FA0A0J9YX94 578 aa16.47■□□□□ 0.23
UBXN11-215ENST00000494942 MOCS3O95396 460 aa16.47■□□□□ 0.23
UBXN11-215ENST00000494942 FKBP3Q00688 224 aaKnown RBP16.47■□□□□ 0.23
UBXN11-215ENST00000494942 PDXDC1Q6P996 788 aa16.47■□□□□ 0.23
UBXN11-215ENST00000494942 SLC51AQ86UW1 340 aa16.47■□□□□ 0.23
UBXN11-215ENST00000494942 SYN2Q92777 582 aaPredicted RBP16.47■□□□□ 0.23
UBXN11-215ENST00000494942 OSBPL9Q96SU4 736 aa16.47■□□□□ 0.23
UBXN11-215ENST00000494942 TSKSQ9UJT2 592 aa16.47■□□□□ 0.23
UBXN11-215ENST00000494942 EDIL3O43854 480 aa16.47■□□□□ 0.23
UBXN11-215ENST00000494942 SPATA4Q8NEY3 305 aa16.47■□□□□ 0.23
UBXN11-215ENST00000494942 SMCR8Q8TEV9 937 aaPredicted RBP16.47■□□□□ 0.23
UBXN11-215ENST00000494942 AENQ8WTP8 325 aaKnown RBP16.47■□□□□ 0.23
UBXN11-215ENST00000494942 NAP1L4Q99733 375 aaKnown RBP16.47■□□□□ 0.23
UBXN11-215ENST00000494942 MLXIPQ9HAP2 919 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms