RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 INPP4AQ96PE3 977 aaPredicted RBP5.28□□□□□ -1.56
PRKD3-210ENST00000494667 SMC6Q96SB8 1091 aa5.28□□□□□ -1.56
PRKD3-210ENST00000494667 MTRQ99707 1265 aa5.28□□□□□ -1.56
PRKD3-210ENST00000494667 TLE6Q9H808 572 aa5.28□□□□□ -1.56
PRKD3-210ENST00000494667 RNPEPL1Q9HAU8 725 aa5.28□□□□□ -1.56
PRKD3-210ENST00000494667 SEC31BQ9NQW1 1179 aa5.28□□□□□ -1.56
PRKD3-210ENST00000494667 FAM114A2Q9NRY5 505 aa5.28□□□□□ -1.56
PRKD3-210ENST00000494667 FAM153AQ9UHL3 310 aa5.28□□□□□ -1.56
PRKD3-210ENST00000494667 LUC7L2Q9Y383 392 aaKnown RBP5.28□□□□□ -1.56
PRKD3-210ENST00000494667 CAPN6Q9Y6Q1 641 aa5.28□□□□□ -1.56
PRKD3-210ENST00000494667 ARAP2Q8WZ64 1704 aa5.28□□□□□ -1.56
PRKD3-210ENST00000494667 ATP5HO75947 161 aa5.28□□□□□ -1.56
PRKD3-210ENST00000494667 LMNAP02545 664 aaKnown RBP5.28□□□□□ -1.56
PRKD3-210ENST00000494667 CALB2P22676 271 aa5.28□□□□□ -1.56
PRKD3-210ENST00000494667 DNM2P50570 870 aa5.28□□□□□ -1.56
PRKD3-210ENST00000494667 EIF4A1P60842 406 aaKnown RBP5.28□□□□□ -1.56
PRKD3-210ENST00000494667 OCRLQ01968 901 aa5.28□□□□□ -1.56
PRKD3-210ENST00000494667 ASTE1Q2TB18 679 aaPredicted RBP5.28□□□□□ -1.56
PRKD3-210ENST00000494667 IRF2BP1Q8IU81 584 aa5.28□□□□□ -1.56
PRKD3-210ENST00000494667 TRMT44Q8IYL2 757 aaKnown RBP5.28□□□□□ -1.56
PRKD3-210ENST00000494667 TLR10Q9BXR5 811 aa5.28□□□□□ -1.56
PRKD3-210ENST00000494667 TRIM4Q9C037 500 aa5.28□□□□□ -1.56
PRKD3-210ENST00000494667 VCXQ9H320 206 aa5.28□□□□□ -1.56
PRKD3-210ENST00000494667 TLR7Q9NYK1 1049 aaKnown RBP5.28□□□□□ -1.56
PRKD3-210ENST00000494667 PDP2Q9P2J9 529 aa5.28□□□□□ -1.56
PRKD3-210ENST00000494667 DOCK2Q92608 1830 aa5.28□□□□□ -1.56
PRKD3-210ENST00000494667 EYA4O95677 639 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 POLR3DP05423 398 aaPredicted RBP5.27□□□□□ -1.57
PRKD3-210ENST00000494667 TPP2P29144 1249 aaPredicted RBP5.27□□□□□ -1.57
PRKD3-210ENST00000494667 PAFAH1B1P43034 410 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 MSH2P43246 934 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 CARSP49589 748 aaKnown RBP5.27□□□□□ -1.57
PRKD3-210ENST00000494667 TOB1P50616 345 aaPredicted RBP5.27□□□□□ -1.57
PRKD3-210ENST00000494667 COPS2P61201 443 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 KLC1Q07866 573 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 PTPN21Q16825 1174 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 HDGFL1Q5TGJ6 251 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 RNF43Q68DV7 783 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 UNC13DQ70J99 1090 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 SGMS1Q86VZ5 419 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 ERICH1Q86X53 443 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 NOSTRINQ8IVI9 506 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 LINS1Q8NG48 757 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 TBC1D16Q8TBP0 767 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 RSPH1Q8WYR4 309 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 PAGE5Q96GU1 130 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 RAB3IPQ96QF0 476 aaPredicted RBP5.27□□□□□ -1.57
PRKD3-210ENST00000494667 NUP88Q99567 741 aaPredicted RBP5.27□□□□□ -1.57
PRKD3-210ENST00000494667 UBA5Q9GZZ9 404 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 CTTNBP2NLQ9P2B4 639 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 AGAP1Q9UPQ3 857 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 L3MBTL1Q9Y468 752 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.27□□□□□ -1.57
PRKD3-210ENST00000494667 NUTM2BA6NNL0 878 aaPredicted RBP5.27□□□□□ -1.57
PRKD3-210ENST00000494667 NUTM2EB1AL46 878 aaPredicted RBP5.27□□□□□ -1.57
PRKD3-210ENST00000494667 KCNJ18B7U540 433 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 BIRC5O15392 142 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 USO1O60763 962 aaKnown RBP5.27□□□□□ -1.57
PRKD3-210ENST00000494667 HSPD1P10809 573 aaKnown RBP5.27□□□□□ -1.57
PRKD3-210ENST00000494667 MARCKSP29966 332 aaPredicted RBP5.27□□□□□ -1.57
PRKD3-210ENST00000494667 PDE6BP35913 854 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 IARSP41252 1262 aaKnown RBP5.27□□□□□ -1.57
PRKD3-210ENST00000494667 ANTXR2P58335 489 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 LSAMPQ13449 338 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 KCNJ12Q14500 433 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 SLC4A8Q2Y0W8 1093 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 BTNL9Q6UXG8 535 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 KSR2Q6VAB6 950 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 SCFD2Q8WU76 684 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 WASF1Q92558 559 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 INPP5DQ92835 1189 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 SYT15Q9BQS2 421 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 NSRP1Q9H0G5 558 aaKnown RBP5.27□□□□□ -1.57
PRKD3-210ENST00000494667 LRMDAQ9H2I8 198 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 ADAM7Q9H2U9 754 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 PHAXQ9H814 394 aaKnown RBP5.27□□□□□ -1.57
PRKD3-210ENST00000494667 NHEJ1Q9H9Q4 299 aaPredicted RBP5.27□□□□□ -1.57
PRKD3-210ENST00000494667 RBM12Q9NTZ6 932 aaKnown RBP5.27□□□□□ -1.57
PRKD3-210ENST00000494667 IL1RAPL1Q9NZN1 696 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 CCDC61Q9Y6R9 512 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 COMMD3-BMI1R4GMX3 469 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 PLCH1Q4KWH8 1693 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 GBP1P32455 592 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 MXRA7P84157 204 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 TAF11Q15544 211 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 ADRM1Q16186 407 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 TNNI3KQ59H18 835 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 ZNF658Q5TYW1 1059 aaPredicted RBP5.27□□□□□ -1.57
PRKD3-210ENST00000494667 KCTD16Q68DU8 428 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 TRIM42Q8IWZ5 723 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 FERMT2Q96AC1 680 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 NR1H4Q96RI1 486 aaPredicted RBP5.27□□□□□ -1.57
PRKD3-210ENST00000494667 MAF1Q9H063 256 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 VCX3BQ9H321 246 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 VCX3AQ9NNX9 186 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 PPANQ9NQ55 473 aaKnown RBP5.27□□□□□ -1.57
PRKD3-210ENST00000494667 RMND1Q9NWS8 449 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 CYP39A1Q9NYL5 469 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 AIPL1Q9NZN9 384 aa5.27□□□□□ -1.57
PRKD3-210ENST00000494667 DBNLQ9UJU6 430 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms