RNA–Protein interactions for RNA: ENST00000494486.1

TRIM59-206, Transcript of tripartite motif containing 59, humanhuman

TSL 3

Gene TRIM59, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-206ENST00000494486 DTWD2Q8NBA8 298 aa13.14□□□□□ -0.31
TRIM59-206ENST00000494486 SEPT8Q92599 483 aa13.14□□□□□ -0.31
TRIM59-206ENST00000494486 CLP1Q92989 425 aaKnown RBP13.14□□□□□ -0.31
TRIM59-206ENST00000494486 TRERF1Q96PN7 1200 aa13.14□□□□□ -0.31
TRIM59-206ENST00000494486 CYP39A1Q9NYL5 469 aa13.14□□□□□ -0.31
TRIM59-206ENST00000494486 GTF2IRD1Q9UHL9 959 aa13.14□□□□□ -0.31
TRIM59-206ENST00000494486 PLAGL2Q9UPG8 496 aa13.14□□□□□ -0.31
TRIM59-206ENST00000494486 NR2E1Q9Y466 385 aa13.14□□□□□ -0.31
TRIM59-206ENST00000494486 CFAP47Q6ZTR5 3102 aa13.14□□□□□ -0.31
TRIM59-206ENST00000494486 AOC1P19801 751 aa13.13□□□□□ -0.31
TRIM59-206ENST00000494486 NRIP1P48552 1158 aa13.13□□□□□ -0.31
TRIM59-206ENST00000494486 NAALADL2Q58DX5 795 aa13.13□□□□□ -0.31
TRIM59-206ENST00000494486 ADGRD2Q7Z7M1 963 aa13.13□□□□□ -0.31
TRIM59-206ENST00000494486 SDR42E1Q8WUS8 393 aa13.13□□□□□ -0.31
TRIM59-206ENST00000494486 P2RX5Q93086 422 aa13.13□□□□□ -0.31
TRIM59-206ENST00000494486 RTP3Q9BQQ7 232 aa13.13□□□□□ -0.31
TRIM59-206ENST00000494486 PRKRIP1Q9H875 184 aaPredicted RBP13.13□□□□□ -0.31
TRIM59-206ENST00000494486 NYAP2Q9P242 653 aa13.13□□□□□ -0.31
TRIM59-206ENST00000494486 ADD3Q9UEY8 706 aaKnown RBP13.13□□□□□ -0.31
TRIM59-206ENST00000494486 MYO7AQ13402 2215 aa13.13□□□□□ -0.31
TRIM59-206ENST00000494486 FSD2A1L4K1 749 aa13.12□□□□□ -0.31
TRIM59-206ENST00000494486 RSPH10B2B2RC85 870 aa13.12□□□□□ -0.31
TRIM59-206ENST00000494486 CSPG5O95196 566 aa13.12□□□□□ -0.31
TRIM59-206ENST00000494486 RSPH10BP0C881 870 aa13.12□□□□□ -0.31
TRIM59-206ENST00000494486 DMWDQ09019 674 aa13.12□□□□□ -0.31
TRIM59-206ENST00000494486 TNNI3KQ59H18 835 aa13.12□□□□□ -0.31
TRIM59-206ENST00000494486 ZC3H14Q6PJT7 736 aaKnown RBP13.12□□□□□ -0.31
TRIM59-206ENST00000494486 C16orf86Q6ZW13 317 aa13.12□□□□□ -0.31
TRIM59-206ENST00000494486 RPAP2Q8IXW5 612 aaPredicted RBP13.12□□□□□ -0.31
TRIM59-206ENST00000494486 DCLK2Q8N568 766 aa13.12□□□□□ -0.31
TRIM59-206ENST00000494486 GPR161Q8N6U8 529 aaKnown RBP13.12□□□□□ -0.31
TRIM59-206ENST00000494486 C7orf31Q8N865 590 aa13.12□□□□□ -0.31
TRIM59-206ENST00000494486 FLCNQ8NFG4 579 aa13.12□□□□□ -0.31
TRIM59-206ENST00000494486 SALL2Q9Y467 1007 aaPredicted RBP13.12□□□□□ -0.31
TRIM59-206ENST00000494486 R4GN57 208 aa13.12□□□□□ -0.31
TRIM59-206ENST00000494486 FPGT-TNNI3KV9GXZ4 949 aa13.12□□□□□ -0.31
TRIM59-206ENST00000494486 TRIP12Q14669 1992 aaPredicted RBP13.11□□□□□ -0.31
TRIM59-206ENST00000494486 MAP1BP46821 2468 aaKnown RBP13.11□□□□□ -0.31
TRIM59-206ENST00000494486 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.11□□□□□ -0.31
TRIM59-206ENST00000494486 PRR5-ARHGAP8B1AHC4 643 aa13.11□□□□□ -0.31
TRIM59-206ENST00000494486 ALAS1P13196 640 aa13.11□□□□□ -0.31
TRIM59-206ENST00000494486 ARHGAP8P85298 464 aa13.11□□□□□ -0.31
TRIM59-206ENST00000494486 C12orf60Q5U649 245 aa13.11□□□□□ -0.31
TRIM59-206ENST00000494486 CWF19L1Q69YN2 538 aaKnown RBP13.11□□□□□ -0.31
TRIM59-206ENST00000494486 RBM23Q86U06 439 aaKnown RBP13.11□□□□□ -0.31
TRIM59-206ENST00000494486 AMOTL1Q8IY63 956 aa13.11□□□□□ -0.31
TRIM59-206ENST00000494486 SCFD2Q8WU76 684 aa13.11□□□□□ -0.31
TRIM59-206ENST00000494486 NEK1Q96PY6 1258 aa13.11□□□□□ -0.31
TRIM59-206ENST00000494486 RTKNQ9BST9 563 aa13.11□□□□□ -0.31
TRIM59-206ENST00000494486 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.11□□□□□ -0.31
TRIM59-206ENST00000494486 HDAC6Q9UBN7 1215 aa13.11□□□□□ -0.31
TRIM59-206ENST00000494486 PI15O43692 258 aa13.1□□□□□ -0.31
TRIM59-206ENST00000494486 CASTP20810 708 aaKnown RBP13.1□□□□□ -0.31
TRIM59-206ENST00000494486 ALDH5A1P51649 535 aaPredicted RBP13.1□□□□□ -0.31
TRIM59-206ENST00000494486 PDE4BQ07343 736 aa13.1□□□□□ -0.31
TRIM59-206ENST00000494486 SPPL3Q8TCT6 385 aa13.1□□□□□ -0.31
TRIM59-206ENST00000494486 ATP8B4Q8TF62 1192 aa13.1□□□□□ -0.31
TRIM59-206ENST00000494486 SSH1Q8WYL5 1049 aa13.1□□□□□ -0.31
TRIM59-206ENST00000494486 KAT2BQ92831 832 aa13.1□□□□□ -0.31
TRIM59-206ENST00000494486 COPS5Q92905 334 aa13.1□□□□□ -0.31
TRIM59-206ENST00000494486 TLE6Q9H808 572 aa13.1□□□□□ -0.31
TRIM59-206ENST00000494486 ATP8A2Q9NTI2 1148 aa13.1□□□□□ -0.31
TRIM59-206ENST00000494486 DMXL1Q9Y485 3027 aa13.1□□□□□ -0.31
TRIM59-206ENST00000494486 ADGRA3Q8IWK6 1321 aa13.1□□□□□ -0.31
TRIM59-206ENST00000494486 MICAL3Q7RTP6 2002 aa13.1□□□□□ -0.31
TRIM59-206ENST00000494486 TXNP10599 105 aaKnown RBP13.09□□□□□ -0.31
TRIM59-206ENST00000494486 DNAJB1P25685 340 aa13.09□□□□□ -0.31
TRIM59-206ENST00000494486 DDX10Q13206 875 aaKnown RBP13.09□□□□□ -0.31
TRIM59-206ENST00000494486 RALGAPA2Q2PPJ7 1873 aa13.09□□□□□ -0.31
TRIM59-206ENST00000494486 NSMFQ6X4W1 530 aa13.09□□□□□ -0.31
TRIM59-206ENST00000494486 WNT8BQ93098 351 aa13.09□□□□□ -0.31
TRIM59-206ENST00000494486 PURBQ96QR8 312 aaKnown RBP13.09□□□□□ -0.31
TRIM59-206ENST00000494486 CDCA3Q99618 268 aaPredicted RBP13.09□□□□□ -0.31
TRIM59-206ENST00000494486 MEIS3Q99687 375 aa13.09□□□□□ -0.31
TRIM59-206ENST00000494486 S1PR5Q9H228 398 aa13.09□□□□□ -0.31
TRIM59-206ENST00000494486 ANTXR1Q9H6X2 564 aa13.09□□□□□ -0.31
TRIM59-206ENST00000494486 CDV3Q9UKY7 258 aaKnown RBP13.09□□□□□ -0.31
TRIM59-206ENST00000494486 CEP250Q9BV73 2442 aa13.08□□□□□ -0.32
TRIM59-206ENST00000494486 DCDC2BA2VCK2 349 aa13.08□□□□□ -0.32
TRIM59-206ENST00000494486 GNAI3P08754 354 aa13.08□□□□□ -0.32
TRIM59-206ENST00000494486 SRGAP2BP0DMP2 458 aa13.08□□□□□ -0.32
TRIM59-206ENST00000494486 NPR3P17342 541 aa13.08□□□□□ -0.32
TRIM59-206ENST00000494486 THPOP40225 353 aa13.08□□□□□ -0.32
TRIM59-206ENST00000494486 COL9A3Q14050 684 aaPredicted RBP13.08□□□□□ -0.32
TRIM59-206ENST00000494486 MUM1L1Q5H9M0 696 aa13.08□□□□□ -0.32
TRIM59-206ENST00000494486 CHURC1Q8WUH1 139 aa13.08□□□□□ -0.32
TRIM59-206ENST00000494486 AFG1LQ8WV93 481 aa13.08□□□□□ -0.32
TRIM59-206ENST00000494486 APBB2Q92870 758 aa13.08□□□□□ -0.32
TRIM59-206ENST00000494486 MPHOSPH6Q99547 160 aaKnown RBP13.08□□□□□ -0.32
TRIM59-206ENST00000494486 KATNAL1Q9BW62 490 aa13.08□□□□□ -0.32
TRIM59-206ENST00000494486 CLIP2Q9UDT6 1046 aa13.08□□□□□ -0.32
TRIM59-206ENST00000494486 SYNPO2Q9UMS6 1093 aa13.08□□□□□ -0.32
TRIM59-206ENST00000494486 VPS13AQ96RL7 3174 aa13.07□□□□□ -0.32
TRIM59-206ENST00000494486 USP24Q9UPU5 2620 aa13.07□□□□□ -0.32
TRIM59-206ENST00000494486 SOBPA7XYQ1 873 aa13.07□□□□□ -0.32
TRIM59-206ENST00000494486 ITGB1P05556 798 aa13.07□□□□□ -0.32
TRIM59-206ENST00000494486 MMP3P08254 477 aa13.07□□□□□ -0.32
TRIM59-206ENST00000494486 BMP3P12645 472 aa13.07□□□□□ -0.32
TRIM59-206ENST00000494486 SP100P23497 879 aaPredicted RBP13.07□□□□□ -0.32
TRIM59-206ENST00000494486 PSEN2P49810 448 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms