RNA–Protein interactions for RNA: ENST00000494446.1

FN1-225, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 676 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-225ENST00000494446 STK11IPQ8N1F8 1099 aa8.15□□□□□ -1.1
FN1-225ENST00000494446 RIPOR3Q96MK2 946 aa8.15□□□□□ -1.1
FN1-225ENST00000494446 CTAGE1Q96RT6 745 aa8.15□□□□□ -1.1
FN1-225ENST00000494446 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.15□□□□□ -1.1
FN1-225ENST00000494446 MRS2Q9HD23 443 aa8.15□□□□□ -1.1
FN1-225ENST00000494446 INCENPQ9NQS7 918 aa8.15□□□□□ -1.1
FN1-225ENST00000494446 CYP39A1Q9NYL5 469 aa8.15□□□□□ -1.1
FN1-225ENST00000494446 CLIP2Q9UDT6 1046 aa8.15□□□□□ -1.1
FN1-225ENST00000494446 KAT6AQ92794 2004 aa8.15□□□□□ -1.11
FN1-225ENST00000494446 USP24Q9UPU5 2620 aa8.15□□□□□ -1.11
FN1-225ENST00000494446 A6NJR5 290 aa8.14□□□□□ -1.11
FN1-225ENST00000494446 GRM6O15303 877 aa8.14□□□□□ -1.11
FN1-225ENST00000494446 LGR5O75473 907 aa8.14□□□□□ -1.11
FN1-225ENST00000494446 RRP1P56182 461 aaKnown RBP8.14□□□□□ -1.11
FN1-225ENST00000494446 IKQ13123 557 aaPredicted RBP8.14□□□□□ -1.11
FN1-225ENST00000494446 ADAM15Q13444 863 aa8.14□□□□□ -1.11
FN1-225ENST00000494446 CBX2Q14781 532 aaPredicted RBP8.14□□□□□ -1.11
FN1-225ENST00000494446 TKFCQ3LXA3 575 aa8.14□□□□□ -1.11
FN1-225ENST00000494446 MUM1L1Q5H9M0 696 aa8.14□□□□□ -1.11
FN1-225ENST00000494446 ZNF618Q5T7W0 954 aa8.14□□□□□ -1.11
FN1-225ENST00000494446 MCTP2Q6DN12 878 aa8.14□□□□□ -1.11
FN1-225ENST00000494446 ZBTB33Q86T24 672 aa8.14□□□□□ -1.11
FN1-225ENST00000494446 DBF4BQ8NFT6 615 aa8.14□□□□□ -1.11
FN1-225ENST00000494446 MORC4Q8TE76 937 aa8.14□□□□□ -1.11
FN1-225ENST00000494446 COPS5Q92905 334 aa8.14□□□□□ -1.11
FN1-225ENST00000494446 CHMP4CQ96CF2 233 aa8.14□□□□□ -1.11
FN1-225ENST00000494446 MSLNLQ96KJ4 702 aa8.14□□□□□ -1.11
FN1-225ENST00000494446 ATP8A2Q9NTI2 1148 aa8.14□□□□□ -1.11
FN1-225ENST00000494446 NYAP2Q9P242 653 aa8.14□□□□□ -1.11
FN1-225ENST00000494446 PLXNA4Q9HCM2 1894 aa8.14□□□□□ -1.11
FN1-225ENST00000494446 RBM47A0AV96 593 aaKnown RBP8.13□□□□□ -1.11
FN1-225ENST00000494446 TMEM232C9JQI7 657 aa8.13□□□□□ -1.11
FN1-225ENST00000494446 NKRFO15226 690 aaKnown RBP eCLIP8.13□□□□□ -1.11
FN1-225ENST00000494446 SURF6O75683 361 aaKnown RBP8.13□□□□□ -1.11
FN1-225ENST00000494446 MBD4O95243 580 aa8.13□□□□□ -1.11
FN1-225ENST00000494446 EYA4O95677 639 aa8.13□□□□□ -1.11
FN1-225ENST00000494446 FDX1P10109 184 aa8.13□□□□□ -1.11
FN1-225ENST00000494446 ICAM3P32942 547 aa8.13□□□□□ -1.11
FN1-225ENST00000494446 ALDH5A1P51649 535 aaPredicted RBP8.13□□□□□ -1.11
FN1-225ENST00000494446 SNAP25P60880 206 aa8.13□□□□□ -1.11
FN1-225ENST00000494446 PDE4BQ07343 736 aa8.13□□□□□ -1.11
FN1-225ENST00000494446 RBL2Q08999 1139 aa8.13□□□□□ -1.11
FN1-225ENST00000494446 MBTPS1Q14703 1052 aa8.13□□□□□ -1.11
FN1-225ENST00000494446 PPP2R5BQ15173 497 aa8.13□□□□□ -1.11
FN1-225ENST00000494446 TTF1Q15361 905 aaPredicted RBP8.13□□□□□ -1.11
FN1-225ENST00000494446 PTPN21Q16825 1174 aa8.13□□□□□ -1.11
FN1-225ENST00000494446 KIAA2013Q8IYS2 634 aa8.13□□□□□ -1.11
FN1-225ENST00000494446 LRRC47Q8N1G4 583 aaKnown RBP8.13□□□□□ -1.11
FN1-225ENST00000494446 TMEM105Q8N8V8 129 aa8.13□□□□□ -1.11
FN1-225ENST00000494446 KCNG4Q8TDN1 519 aa8.13□□□□□ -1.11
FN1-225ENST00000494446 EAF2Q96CJ1 260 aaPredicted RBP8.13□□□□□ -1.11
FN1-225ENST00000494446 DDRGK1Q96HY6 314 aa8.13□□□□□ -1.11
FN1-225ENST00000494446 PHF7Q9BWX1 381 aaPredicted RBP8.13□□□□□ -1.11
FN1-225ENST00000494446 LMAN2LQ9H0V9 348 aa8.13□□□□□ -1.11
FN1-225ENST00000494446 ADD3Q9UEY8 706 aaKnown RBP8.13□□□□□ -1.11
FN1-225ENST00000494446 USP15Q9Y4E8 981 aaPredicted RBP8.13□□□□□ -1.11
FN1-225ENST00000494446 TCRBV5S4A2TA0A5A2 114 aa8.12□□□□□ -1.11
FN1-225ENST00000494446 BCAR3O75815 825 aa8.12□□□□□ -1.11
FN1-225ENST00000494446 RB1P06400 928 aa8.12□□□□□ -1.11
FN1-225ENST00000494446 TXNP10599 105 aaKnown RBP8.12□□□□□ -1.11
FN1-225ENST00000494446 BMP3P12645 472 aa8.12□□□□□ -1.11
FN1-225ENST00000494446 STAT2P52630 851 aa8.12□□□□□ -1.11
FN1-225ENST00000494446 PUM1Q14671 1186 aaKnown RBP eCLIP8.12□□□□□ -1.11
FN1-225ENST00000494446 SLFNL1Q499Z3 407 aa8.12□□□□□ -1.11
FN1-225ENST00000494446 SLFN13Q68D06 897 aa8.12□□□□□ -1.11
FN1-225ENST00000494446 SESTD1Q86VW0 696 aa8.12□□□□□ -1.11
FN1-225ENST00000494446 FIBCD1Q8N539 461 aa8.12□□□□□ -1.11
FN1-225ENST00000494446 C7orf31Q8N865 590 aa8.12□□□□□ -1.11
FN1-225ENST00000494446 SMRP1Q8NCR6 262 aa8.12□□□□□ -1.11
FN1-225ENST00000494446 TOP1MTQ969P6 601 aa8.12□□□□□ -1.11
FN1-225ENST00000494446 ALG1Q9BT22 464 aa8.12□□□□□ -1.11
FN1-225ENST00000494446 C11orf84Q9BUA3 381 aaPredicted RBP8.12□□□□□ -1.11
FN1-225ENST00000494446 MKNK2Q9HBH9 465 aa8.12□□□□□ -1.11
FN1-225ENST00000494446 CLEC1BQ9P126 229 aa8.12□□□□□ -1.11
FN1-225ENST00000494446 HDAC6Q9UBN7 1215 aa8.12□□□□□ -1.11
FN1-225ENST00000494446 LOXHD1Q8IVV2 1947 aa8.11□□□□□ -1.11
FN1-225ENST00000494446 EMSYQ7Z589 1322 aa8.11□□□□□ -1.11
FN1-225ENST00000494446 GOLIM4O00461 696 aa8.11□□□□□ -1.11
FN1-225ENST00000494446 RASA1P20936 1047 aa8.11□□□□□ -1.11
FN1-225ENST00000494446 BMPR1AP36894 532 aa8.11□□□□□ -1.11
FN1-225ENST00000494446 PDE4DQ08499 809 aa8.11□□□□□ -1.11
FN1-225ENST00000494446 COASYQ13057 564 aa8.11□□□□□ -1.11
FN1-225ENST00000494446 PTK7Q13308 1070 aa8.11□□□□□ -1.11
FN1-225ENST00000494446 BAATQ14032 418 aaPredicted RBP8.11□□□□□ -1.11
FN1-225ENST00000494446 ST3GAL2Q16842 350 aa8.11□□□□□ -1.11
FN1-225ENST00000494446 TRIM71Q2Q1W2 868 aaKnown RBP8.11□□□□□ -1.11
FN1-225ENST00000494446 CTR9Q6PD62 1173 aa8.11□□□□□ -1.11
FN1-225ENST00000494446 TRAF7Q6Q0C0 670 aa8.11□□□□□ -1.11
FN1-225ENST00000494446 CHST3Q7LGC8 479 aa8.11□□□□□ -1.11
FN1-225ENST00000494446 RBM23Q86U06 439 aaKnown RBP8.11□□□□□ -1.11
FN1-225ENST00000494446 RPAP2Q8IXW5 612 aaPredicted RBP8.11□□□□□ -1.11
FN1-225ENST00000494446 SCFD2Q8WU76 684 aa8.11□□□□□ -1.11
FN1-225ENST00000494446 CHURC1Q8WUH1 139 aa8.11□□□□□ -1.11
FN1-225ENST00000494446 AFG1LQ8WV93 481 aa8.11□□□□□ -1.11
FN1-225ENST00000494446 WNT8BQ93098 351 aa8.11□□□□□ -1.11
FN1-225ENST00000494446 PPP2R3CQ969Q6 453 aa8.11□□□□□ -1.11
FN1-225ENST00000494446 IL17RAQ96F46 866 aa8.11□□□□□ -1.11
FN1-225ENST00000494446 DNAJC2Q99543 621 aaKnown RBP8.11□□□□□ -1.11
FN1-225ENST00000494446 IFIH1Q9BYX4 1025 aaKnown RBP8.11□□□□□ -1.11
FN1-225ENST00000494446 GTF2IRD1Q9UHL9 959 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms