RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 CCDC144CPQ8IYA2 1237 aa10.17□□□□□ -0.78
ITGB1-217ENST00000494395 ANKLE1Q8NAG6 615 aa10.17□□□□□ -0.78
ITGB1-217ENST00000494395 FANCBQ8NB91 859 aa10.17□□□□□ -0.78
ITGB1-217ENST00000494395 DIS3LQ8TF46 1054 aaKnown RBP10.17□□□□□ -0.78
ITGB1-217ENST00000494395 AMNQ9BXJ7 453 aa10.17□□□□□ -0.78
ITGB1-217ENST00000494395 TM6SF1Q9BZW5 370 aa10.17□□□□□ -0.78
ITGB1-217ENST00000494395 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.17□□□□□ -0.78
ITGB1-217ENST00000494395 SLC12A7Q9Y666 1083 aa10.17□□□□□ -0.78
ITGB1-217ENST00000494395 KIAA1217Q5T5P2 1943 aa10.17□□□□□ -0.78
ITGB1-217ENST00000494395 CNTNAP5Q8WYK1 1306 aa10.16□□□□□ -0.78
ITGB1-217ENST00000494395 LOC102724159A0A0B4J2E5 919 aa10.16□□□□□ -0.78
ITGB1-217ENST00000494395 KLF18A0A0U1RQI7 1052 aa10.16□□□□□ -0.78
ITGB1-217ENST00000494395 MOXD2PA6NHM9 499 aa10.16□□□□□ -0.78
ITGB1-217ENST00000494395 SPTLC1O15269 473 aa10.16□□□□□ -0.78
ITGB1-217ENST00000494395 ADCY6O43306 1168 aa10.16□□□□□ -0.78
ITGB1-217ENST00000494395 DHX16O60231 1041 aaKnown RBP10.16□□□□□ -0.78
ITGB1-217ENST00000494395 FARP2O94887 1054 aaPredicted RBP10.16□□□□□ -0.78
ITGB1-217ENST00000494395 TFRCP02786 760 aaKnown RBP10.16□□□□□ -0.78
ITGB1-217ENST00000494395 PSMA5P28066 241 aa10.16□□□□□ -0.78
ITGB1-217ENST00000494395 CDC27P30260 824 aa10.16□□□□□ -0.78
ITGB1-217ENST00000494395 GNAQP50148 359 aa10.16□□□□□ -0.78
ITGB1-217ENST00000494395 ALDH5A1P51649 535 aaPredicted RBP10.16□□□□□ -0.78
ITGB1-217ENST00000494395 HSD17B4P51659 736 aa10.16□□□□□ -0.78
ITGB1-217ENST00000494395 TOB2Q14106 344 aaPredicted RBP10.16□□□□□ -0.78
ITGB1-217ENST00000494395 PWP2Q15269 919 aaKnown RBP10.16□□□□□ -0.78
ITGB1-217ENST00000494395 RNF207Q6ZRF8 634 aa10.16□□□□□ -0.78
ITGB1-217ENST00000494395 Q6ZUG5 572 aa10.16□□□□□ -0.78
ITGB1-217ENST00000494395 RUFY3Q7L099 469 aa10.16□□□□□ -0.78
ITGB1-217ENST00000494395 HOMER1Q86YM7 354 aa10.16□□□□□ -0.78
ITGB1-217ENST00000494395 DNERQ8NFT8 737 aa10.16□□□□□ -0.78
ITGB1-217ENST00000494395 BRF1Q92994 677 aa10.16□□□□□ -0.78
ITGB1-217ENST00000494395 LZTS2Q9BRK4 669 aa10.16□□□□□ -0.78
ITGB1-217ENST00000494395 ABHD16BQ9H3Z7 469 aa10.16□□□□□ -0.78
ITGB1-217ENST00000494395 COL20A1Q9P218 1284 aa10.16□□□□□ -0.78
ITGB1-217ENST00000494395 MRPL11Q9Y3B7 192 aaKnown RBP10.16□□□□□ -0.78
ITGB1-217ENST00000494395 DDX49Q9Y6V7 483 aaKnown RBP10.16□□□□□ -0.78
ITGB1-217ENST00000494395 PDE4DIPQ5VU43 2346 aa10.16□□□□□ -0.78
ITGB1-217ENST00000494395 PTPDC1A2A3K4 754 aa10.15□□□□□ -0.78
ITGB1-217ENST00000494395 ASB14A6NK59 587 aa10.15□□□□□ -0.78
ITGB1-217ENST00000494395 ZBTB43O43298 467 aa10.15□□□□□ -0.78
ITGB1-217ENST00000494395 COL6A1P12109 1028 aa10.15□□□□□ -0.78
ITGB1-217ENST00000494395 CNGA1P29973 690 aa10.15□□□□□ -0.78
ITGB1-217ENST00000494395 GCGRP47871 477 aa10.15□□□□□ -0.78
ITGB1-217ENST00000494395 ANAPC15P60006 121 aa10.15□□□□□ -0.78
ITGB1-217ENST00000494395 APOBRQ0VD83 1088 aa10.15□□□□□ -0.78
ITGB1-217ENST00000494395 ACVR2BQ13705 512 aa10.15□□□□□ -0.78
ITGB1-217ENST00000494395 TAPT1Q6NXT6 567 aa10.15□□□□□ -0.78
ITGB1-217ENST00000494395 CMTR1Q8N1G2 835 aaKnown RBP10.15□□□□□ -0.78
ITGB1-217ENST00000494395 SAMD3Q8N6K7 520 aa10.15□□□□□ -0.78
ITGB1-217ENST00000494395 SYTL5Q8TDW5 730 aaPredicted RBP10.15□□□□□ -0.78
ITGB1-217ENST00000494395 CNPY2Q9Y2B0 182 aa10.15□□□□□ -0.78
ITGB1-217ENST00000494395 PCDHA1Q9Y5I3 950 aa10.15□□□□□ -0.78
ITGB1-217ENST00000494395 GOLGA8AA7E2F4 631 aa10.14□□□□□ -0.79
ITGB1-217ENST00000494395 GOLGA8BA8MQT2 603 aa10.14□□□□□ -0.79
ITGB1-217ENST00000494395 ADAMTS4O75173 837 aa10.14□□□□□ -0.79
ITGB1-217ENST00000494395 AKR1A1P14550 325 aa10.14□□□□□ -0.79
ITGB1-217ENST00000494395 NDUFV2P19404 249 aa10.14□□□□□ -0.79
ITGB1-217ENST00000494395 CALML3P27482 149 aa10.14□□□□□ -0.79
ITGB1-217ENST00000494395 NKX3-2P78367 333 aa10.14□□□□□ -0.79
ITGB1-217ENST00000494395 MCM6Q14566 821 aa10.14□□□□□ -0.79
ITGB1-217ENST00000494395 RTN1Q16799 776 aa10.14□□□□□ -0.79
ITGB1-217ENST00000494395 TUSC1Q2TAM9 212 aa10.14□□□□□ -0.79
ITGB1-217ENST00000494395 ANO1Q5XXA6 986 aa10.14□□□□□ -0.79
ITGB1-217ENST00000494395 MCF2L2Q86YR7 1114 aa10.14□□□□□ -0.79
ITGB1-217ENST00000494395 LENG1Q96BZ8 264 aaPredicted RBP10.14□□□□□ -0.79
ITGB1-217ENST00000494395 RRP36Q96EU6 259 aaKnown RBP10.14□□□□□ -0.79
ITGB1-217ENST00000494395 PAWRQ96IZ0 340 aaKnown RBP10.14□□□□□ -0.79
ITGB1-217ENST00000494395 TAAR1Q96RJ0 339 aa10.14□□□□□ -0.79
ITGB1-217ENST00000494395 UPF3BQ9BZI7 483 aaKnown RBP10.14□□□□□ -0.79
ITGB1-217ENST00000494395 RBM28Q9NW13 759 aaKnown RBP10.14□□□□□ -0.79
ITGB1-217ENST00000494395 MAP3K20Q9NYL2 800 aaKnown RBP10.14□□□□□ -0.79
ITGB1-217ENST00000494395 ADD3Q9UEY8 706 aaKnown RBP10.14□□□□□ -0.79
ITGB1-217ENST00000494395 FRMPD4Q14CM0 1322 aa10.13□□□□□ -0.79
ITGB1-217ENST00000494395 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.13□□□□□ -0.79
ITGB1-217ENST00000494395 RBM47A0AV96 593 aaKnown RBP10.13□□□□□ -0.79
ITGB1-217ENST00000494395 BHMG1C9JSJ3 638 aaPredicted RBP10.13□□□□□ -0.79
ITGB1-217ENST00000494395 CTAGE5O15320 804 aa10.13□□□□□ -0.79
ITGB1-217ENST00000494395 ADD1P35611 737 aaKnown RBP10.13□□□□□ -0.79
ITGB1-217ENST00000494395 RFC5P40937 340 aa10.13□□□□□ -0.79
ITGB1-217ENST00000494395 METAP2P50579 478 aaKnown RBP eCLIP10.13□□□□□ -0.796e-7■□□□□ 11
ITGB1-217ENST00000494395 TRAF1Q13077 416 aa10.13□□□□□ -0.79
ITGB1-217ENST00000494395 PPP2R5BQ15173 497 aa10.13□□□□□ -0.79
ITGB1-217ENST00000494395 LRRC41Q15345 812 aa10.13□□□□□ -0.79
ITGB1-217ENST00000494395 NTRK3Q16288 839 aa10.13□□□□□ -0.79
ITGB1-217ENST00000494395 CSPP1Q1MSJ5 1256 aa10.13□□□□□ -0.79
ITGB1-217ENST00000494395 CCDC144BQ3MJ40 725 aa10.13□□□□□ -0.79
ITGB1-217ENST00000494395 CCSAPQ6IQ19 270 aaPredicted RBP10.13□□□□□ -0.79
ITGB1-217ENST00000494395 SYNE3Q6ZMZ3 975 aa10.13□□□□□ -0.79
ITGB1-217ENST00000494395 NECAB2Q7Z6G3 386 aa10.13□□□□□ -0.79
ITGB1-217ENST00000494395 LAPTM4BQ86VI4 370 aa10.13□□□□□ -0.79
ITGB1-217ENST00000494395 FBXO16Q8IX29 292 aaPredicted RBP10.13□□□□□ -0.79
ITGB1-217ENST00000494395 PIBF1Q8WXW3 757 aa10.13□□□□□ -0.79
ITGB1-217ENST00000494395 UPF3AQ9H1J1 476 aaKnown RBP10.13□□□□□ -0.79
ITGB1-217ENST00000494395 ALDH8A1Q9H2A2 487 aaPredicted RBP10.13□□□□□ -0.79
ITGB1-217ENST00000494395 VTA1Q9NP79 307 aa10.13□□□□□ -0.79
ITGB1-217ENST00000494395 PDGFCQ9NRA1 345 aa10.13□□□□□ -0.79
ITGB1-217ENST00000494395 ZHX1Q9UKY1 873 aaPredicted RBP10.13□□□□□ -0.79
ITGB1-217ENST00000494395 FAM184BQ9ULE4 1060 aa10.13□□□□□ -0.79
ITGB1-217ENST00000494395 GNEQ9Y223 722 aaKnown RBP10.13□□□□□ -0.79
ITGB1-217ENST00000494395 CYP46A1Q9Y6A2 500 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms