RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 AACSQ86V21 672 aa9.84□□□□□ -0.83
RIF1-211ENST00000494333 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.84□□□□□ -0.83
RIF1-211ENST00000494333 NOL10Q9BSC4 688 aaKnown RBP9.84□□□□□ -0.83
RIF1-211ENST00000494333 DNAJC25Q9H1X3 360 aa9.84□□□□□ -0.83
RIF1-211ENST00000494333 IL1RAPL2Q9NP60 686 aa9.84□□□□□ -0.83
RIF1-211ENST00000494333 PRDM6Q9NQX0 595 aa9.84□□□□□ -0.83
RIF1-211ENST00000494333 AATFQ9NY61 560 aaKnown RBP eCLIP9.84□□□□□ -0.83
RIF1-211ENST00000494333 TRIM17Q9Y577 477 aa9.84□□□□□ -0.83
RIF1-211ENST00000494333 CNTNAP5Q8WYK1 1306 aa9.83□□□□□ -0.84
RIF1-211ENST00000494333 BTBD19C9JJ37 291 aa9.83□□□□□ -0.84
RIF1-211ENST00000494333 LILRB5O75023 590 aa9.83□□□□□ -0.84
RIF1-211ENST00000494333 PDE3AQ14432 1141 aa9.83□□□□□ -0.84
RIF1-211ENST00000494333 NOL9Q5SY16 702 aaKnown RBP9.83□□□□□ -0.84
RIF1-211ENST00000494333 FBXO46Q6PJ61 603 aaPredicted RBP9.83□□□□□ -0.84
RIF1-211ENST00000494333 SIRT2Q8IXJ6 389 aa9.83□□□□□ -0.84
RIF1-211ENST00000494333 TEX11Q8IYF3 940 aa9.83□□□□□ -0.84
RIF1-211ENST00000494333 CD99L2Q8TCZ2 262 aa9.83□□□□□ -0.84
RIF1-211ENST00000494333 SH3RF3Q8TEJ3 882 aaPredicted RBP9.83□□□□□ -0.84
RIF1-211ENST00000494333 TTC9Q92623 222 aa9.83□□□□□ -0.84
RIF1-211ENST00000494333 ERO1AQ96HE7 468 aa9.83□□□□□ -0.84
RIF1-211ENST00000494333 RASSF4Q9H2L5 321 aa9.83□□□□□ -0.84
RIF1-211ENST00000494333 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.83□□□□□ -0.84
RIF1-211ENST00000494333 PIH1D3Q9NQM4 214 aaKnown RBP9.83□□□□□ -0.84
RIF1-211ENST00000494333 PICK1Q9NRD5 415 aa9.83□□□□□ -0.84
RIF1-211ENST00000494333 ZHX2Q9Y6X8 837 aa9.83□□□□□ -0.84
RIF1-211ENST00000494333 TLR2O60603 784 aa9.82□□□□□ -0.84
RIF1-211ENST00000494333 CTNND1O60716 968 aaKnown RBP9.82□□□□□ -0.84
RIF1-211ENST00000494333 IGSF3O75054 1194 aa9.82□□□□□ -0.84
RIF1-211ENST00000494333 IDH1O75874 414 aaKnown RBP9.82□□□□□ -0.84
RIF1-211ENST00000494333 EDN3P14138 238 aa9.82□□□□□ -0.84
RIF1-211ENST00000494333 RGS19P49795 217 aa9.82□□□□□ -0.84
RIF1-211ENST00000494333 AFF1P51825 1210 aaKnown RBP9.82□□□□□ -0.84
RIF1-211ENST00000494333 COL9A3Q14050 684 aaPredicted RBP9.82□□□□□ -0.84
RIF1-211ENST00000494333 OTOP1Q7RTM1 612 aa9.82□□□□□ -0.84
RIF1-211ENST00000494333 ADGRA1Q86SQ6 560 aa9.82□□□□□ -0.84
RIF1-211ENST00000494333 GALNT12Q8IXK2 581 aa9.82□□□□□ -0.84
RIF1-211ENST00000494333 SCYL3Q8IZE3 742 aa9.82□□□□□ -0.84
RIF1-211ENST00000494333 CLASRPQ8N2M8 674 aaKnown RBP9.82□□□□□ -0.84
RIF1-211ENST00000494333 TGFBRAP1Q8WUH2 860 aa9.82□□□□□ -0.84
RIF1-211ENST00000494333 KIF1BPQ96EK5 621 aa9.82□□□□□ -0.84
RIF1-211ENST00000494333 OSBPL5Q9H0X9 879 aaPredicted RBP9.82□□□□□ -0.84
RIF1-211ENST00000494333 ANTXR1Q9H6X2 564 aa9.82□□□□□ -0.84
RIF1-211ENST00000494333 LATS2Q9NRM7 1088 aa9.82□□□□□ -0.84
RIF1-211ENST00000494333 RFX7Q2KHR2 1363 aa9.82□□□□□ -0.84
RIF1-211ENST00000494333 ATRNL1Q5VV63 1379 aa9.82□□□□□ -0.84
RIF1-211ENST00000494333 CXCL11O14625 94 aa9.81□□□□□ -0.84
RIF1-211ENST00000494333 RAB11FIP3O75154 756 aa9.81□□□□□ -0.84
RIF1-211ENST00000494333 IFIT2P09913 472 aaKnown RBP9.81□□□□□ -0.84
RIF1-211ENST00000494333 PTPRAP18433 802 aa9.81□□□□□ -0.84
RIF1-211ENST00000494333 CYP7A1P22680 504 aa9.81□□□□□ -0.84
RIF1-211ENST00000494333 MAPK8P45983 427 aa9.81□□□□□ -0.84
RIF1-211ENST00000494333 SOX10P56693 466 aa9.81□□□□□ -0.84
RIF1-211ENST00000494333 PEAR1Q5VY43 1037 aaPredicted RBP9.81□□□□□ -0.84
RIF1-211ENST00000494333 ANKRD23Q86SG2 305 aa9.81□□□□□ -0.84
RIF1-211ENST00000494333 PBX4Q9BYU1 374 aa9.81□□□□□ -0.84
RIF1-211ENST00000494333 DHX36Q9H2U1 1008 aaKnown RBP9.81□□□□□ -0.84
RIF1-211ENST00000494333 ZCCHC17Q9NP64 241 aaKnown RBP9.81□□□□□ -0.84
RIF1-211ENST00000494333 DZANK1Q9NVP4 752 aa9.81□□□□□ -0.84
RIF1-211ENST00000494333 MKL2Q9ULH7 1088 aa9.81□□□□□ -0.84
RIF1-211ENST00000494333 MYH13Q9UKX3 1938 aa9.81□□□□□ -0.84
RIF1-211ENST00000494333 PNMA6FA0A0J9YX94 578 aa9.8□□□□□ -0.84
RIF1-211ENST00000494333 PDHXO00330 501 aa9.8□□□□□ -0.84
RIF1-211ENST00000494333 P4HBP07237 508 aaKnown RBP9.8□□□□□ -0.84
RIF1-211ENST00000494333 DYNLL1P63167 89 aaKnown RBP9.8□□□□□ -0.84
RIF1-211ENST00000494333 CAP1Q01518 475 aa9.8□□□□□ -0.84
RIF1-211ENST00000494333 MAP3K12Q12852 859 aa9.8□□□□□ -0.84
RIF1-211ENST00000494333 ARHGEF6Q15052 776 aa9.8□□□□□ -0.84
RIF1-211ENST00000494333 ENOX2Q16206 610 aaKnown RBP9.8□□□□□ -0.84
RIF1-211ENST00000494333 CEP135Q66GS9 1140 aa9.8□□□□□ -0.84
RIF1-211ENST00000494333 FASTKD5Q7L8L6 764 aaKnown RBP9.8□□□□□ -0.84
RIF1-211ENST00000494333 CCDC84Q86UT8 332 aaPredicted RBP9.8□□□□□ -0.84
RIF1-211ENST00000494333 MAPKAPK5Q8IW41 473 aa9.8□□□□□ -0.84
RIF1-211ENST00000494333 BEND7Q8N7W2 519 aaPredicted RBP9.8□□□□□ -0.84
RIF1-211ENST00000494333 MAGEB6Q8N7X4 407 aa9.8□□□□□ -0.84
RIF1-211ENST00000494333 MIGA1Q8NAN2 632 aa9.8□□□□□ -0.84
RIF1-211ENST00000494333 CCDC74AQ96AQ1 378 aa9.8□□□□□ -0.84
RIF1-211ENST00000494333 SCARF2Q96GP6 870 aaPredicted RBP9.8□□□□□ -0.84
RIF1-211ENST00000494333 OSMRQ99650 979 aa9.8□□□□□ -0.84
RIF1-211ENST00000494333 ZKSCAN3Q9BRR0 538 aa9.8□□□□□ -0.84
RIF1-211ENST00000494333 PI4KBQ9UBF8 816 aa9.8□□□□□ -0.84
RIF1-211ENST00000494333 TRIM33Q9UPN9 1127 aa9.8□□□□□ -0.84
RIF1-211ENST00000494333 PTPN22Q9Y2R2 807 aa9.8□□□□□ -0.84
RIF1-211ENST00000494333 AFG3L2Q9Y4W6 797 aa9.8□□□□□ -0.84
RIF1-211ENST00000494333 TRIM75PA6NK02 468 aa9.79□□□□□ -0.84
RIF1-211ENST00000494333 SMNDC1O75940 238 aaKnown RBP eCLIP9.79□□□□□ -0.84
RIF1-211ENST00000494333 NID1P14543 1247 aa9.79□□□□□ -0.84
RIF1-211ENST00000494333 MOGSQ13724 837 aa9.79□□□□□ -0.84
RIF1-211ENST00000494333 KIF22Q14807 665 aa9.79□□□□□ -0.84
RIF1-211ENST00000494333 TTF1Q15361 905 aaPredicted RBP9.79□□□□□ -0.84
RIF1-211ENST00000494333 GDF6Q6KF10 455 aaPredicted RBP9.79□□□□□ -0.84
RIF1-211ENST00000494333 GPAT2Q6NUI2 795 aa9.79□□□□□ -0.84
RIF1-211ENST00000494333 NPAS4Q8IUM7 802 aa9.79□□□□□ -0.84
RIF1-211ENST00000494333 FOXP4Q8IVH2 680 aaPredicted RBP9.79□□□□□ -0.84
RIF1-211ENST00000494333 TRIM11Q96F44 468 aa9.79□□□□□ -0.84
RIF1-211ENST00000494333 NPHS2Q9NP85 383 aa9.79□□□□□ -0.84
RIF1-211ENST00000494333 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.79□□□□□ -0.84
RIF1-211ENST00000494333 CPA4Q9UI42 421 aa9.79□□□□□ -0.84
RIF1-211ENST00000494333 HERC5Q9UII4 1024 aaKnown RBP9.79□□□□□ -0.84
RIF1-211ENST00000494333 PALD1Q9ULE6 856 aa9.79□□□□□ -0.84
RIF1-211ENST00000494333 MYH2Q9UKX2 1941 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms