RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 PCNX4Q63HM2 1172 aa14.27□□□□□ -0.12
TRA2A-209ENST00000494255 GALNT17Q6IS24 598 aa14.27□□□□□ -0.12
TRA2A-209ENST00000494255 SEPT14Q6ZU15 432 aa14.27□□□□□ -0.12
TRA2A-209ENST00000494255 ANKLE1Q8NAG6 615 aa14.27□□□□□ -0.12
TRA2A-209ENST00000494255 ARRDC4Q8NCT1 418 aa14.27□□□□□ -0.12
TRA2A-209ENST00000494255 WDR11Q9BZH6 1224 aa14.27□□□□□ -0.12
TRA2A-209ENST00000494255 TMEM260Q9NX78 707 aa14.27□□□□□ -0.12
TRA2A-209ENST00000494255 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.26□□□□□ -0.13
TRA2A-209ENST00000494255 RBM47A0AV96 593 aaKnown RBP14.26□□□□□ -0.13
TRA2A-209ENST00000494255 NKRFO15226 690 aaKnown RBP eCLIP14.26□□□□□ -0.131e-12■■□□□ 11.7
TRA2A-209ENST00000494255 FARP2O94887 1054 aaPredicted RBP14.26□□□□□ -0.13
TRA2A-209ENST00000494255 MYCNP04198 464 aaPredicted RBP14.26□□□□□ -0.13
TRA2A-209ENST00000494255 FDPSP14324 419 aaKnown RBP14.26□□□□□ -0.13
TRA2A-209ENST00000494255 CLK2P49760 499 aaKnown RBP14.26□□□□□ -0.13
TRA2A-209ENST00000494255 TRIM29Q14134 588 aa14.26□□□□□ -0.13
TRA2A-209ENST00000494255 LENG1Q96BZ8 264 aaPredicted RBP14.26□□□□□ -0.13
TRA2A-209ENST00000494255 AP5M1Q9H0R1 490 aa14.26□□□□□ -0.13
TRA2A-209ENST00000494255 PCDHA4Q9UN74 947 aa14.26□□□□□ -0.13
TRA2A-209ENST00000494255 KBTBD13C9JR72 458 aa14.26□□□□□ -0.13
TRA2A-209ENST00000494255 TXNP10599 105 aaKnown RBP14.26□□□□□ -0.13
TRA2A-209ENST00000494255 SMPD1P17405 629 aa14.26□□□□□ -0.13
TRA2A-209ENST00000494255 GNPTABQ3T906 1256 aa14.26□□□□□ -0.13
TRA2A-209ENST00000494255 DUSP28Q4G0W2 176 aa14.26□□□□□ -0.13
TRA2A-209ENST00000494255 KCNV1Q6PIU1 500 aa14.26□□□□□ -0.13
TRA2A-209ENST00000494255 RNF180Q86T96 592 aa14.26□□□□□ -0.13
TRA2A-209ENST00000494255 TLK2Q86UE8 772 aa14.26□□□□□ -0.13
TRA2A-209ENST00000494255 BLIDQ8IZY5 108 aa14.26□□□□□ -0.13
TRA2A-209ENST00000494255 FAM184AQ8NB25 1140 aa14.26□□□□□ -0.13
TRA2A-209ENST00000494255 DAGLBQ8NCG7 672 aa14.26□□□□□ -0.13
TRA2A-209ENST00000494255 PGBD1Q96JS3 809 aa14.26□□□□□ -0.13
TRA2A-209ENST00000494255 KCNJ14Q9UNX9 436 aa14.26□□□□□ -0.13
TRA2A-209ENST00000494255 MRVI1Q9Y6F6 885 aa14.26□□□□□ -0.13
TRA2A-209ENST00000494255 ADCY6O43306 1168 aa14.25□□□□□ -0.13
TRA2A-209ENST00000494255 PGK1P00558 417 aa14.25□□□□□ -0.13
TRA2A-209ENST00000494255 NLRX1Q86UT6 975 aa14.25□□□□□ -0.13
TRA2A-209ENST00000494255 ZFP91Q96JP5 570 aaPredicted RBP14.25□□□□□ -0.13
TRA2A-209ENST00000494255 PHF20Q9BVI0 1012 aa14.25□□□□□ -0.13
TRA2A-209ENST00000494255 BRMS1Q9HCU9 246 aa14.25□□□□□ -0.13
TRA2A-209ENST00000494255 RTEL1Q9NZ71 1219 aa14.25□□□□□ -0.13
TRA2A-209ENST00000494255 GNEQ9Y223 722 aaKnown RBP14.25□□□□□ -0.13
TRA2A-209ENST00000494255 Q9Y3F1 56 aa14.25□□□□□ -0.13
TRA2A-209ENST00000494255 KIF3AQ9Y496 699 aa14.25□□□□□ -0.13
TRA2A-209ENST00000494255 SYNRGQ9UMZ2 1314 aa14.25□□□□□ -0.13
TRA2A-209ENST00000494255 C6orf222P0C671 652 aaPredicted RBP14.24□□□□□ -0.13
TRA2A-209ENST00000494255 SREBF1P36956 1147 aa14.24□□□□□ -0.13
TRA2A-209ENST00000494255 FOSBP53539 338 aa14.24□□□□□ -0.13
TRA2A-209ENST00000494255 MRPS9P82933 396 aaKnown RBP14.24□□□□□ -0.13
TRA2A-209ENST00000494255 LRRC41Q15345 812 aa14.24□□□□□ -0.13
TRA2A-209ENST00000494255 IFFO2Q5TF58 517 aa14.24□□□□□ -0.13
TRA2A-209ENST00000494255 RASGRP4Q8TDF6 673 aa14.24□□□□□ -0.13
TRA2A-209ENST00000494255 INPP4AQ96PE3 977 aaPredicted RBP14.24□□□□□ -0.13
TRA2A-209ENST00000494255 UPF3AQ9H1J1 476 aaKnown RBP14.24□□□□□ -0.13
TRA2A-209ENST00000494255 DNM1LO00429 736 aa14.23□□□□□ -0.13
TRA2A-209ENST00000494255 DYNC1LI2O43237 492 aaPredicted RBP14.23□□□□□ -0.13
TRA2A-209ENST00000494255 TGFB3P10600 412 aa14.23□□□□□ -0.13
TRA2A-209ENST00000494255 ZNF76P36508 570 aa14.23□□□□□ -0.13
TRA2A-209ENST00000494255 GJA9P57773 515 aa14.23□□□□□ -0.13
TRA2A-209ENST00000494255 ARHGAP4P98171 946 aa14.23□□□□□ -0.13
TRA2A-209ENST00000494255 GJC2Q5T442 439 aaPredicted RBP14.23□□□□□ -0.13
TRA2A-209ENST00000494255 NECAB2Q7Z6G3 386 aa14.23□□□□□ -0.13
TRA2A-209ENST00000494255 OR6J1Q8NGC5 347 aa14.23□□□□□ -0.13
TRA2A-209ENST00000494255 C8orf76Q96K31 380 aa14.23□□□□□ -0.13
TRA2A-209ENST00000494255 GJB4Q9NTQ9 266 aa14.23□□□□□ -0.13
TRA2A-209ENST00000494255 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.23□□□□□ -0.13
TRA2A-209ENST00000494255 ADAMTS3O15072 1205 aa14.23□□□□□ -0.13
TRA2A-209ENST00000494255 FIBPO43427 364 aa14.23□□□□□ -0.13
TRA2A-209ENST00000494255 ZEB2O60315 1214 aa14.23□□□□□ -0.13
TRA2A-209ENST00000494255 ADAMTS4O75173 837 aa14.23□□□□□ -0.13
TRA2A-209ENST00000494255 RGS20O76081 388 aa14.23□□□□□ -0.13
TRA2A-209ENST00000494255 GH1P01241 217 aa14.23□□□□□ -0.13
TRA2A-209ENST00000494255 NPY5RQ15761 445 aa14.23□□□□□ -0.13
TRA2A-209ENST00000494255 LY6KQ17RY6 165 aa14.23□□□□□ -0.13
TRA2A-209ENST00000494255 BRDTQ58F21 947 aaPredicted RBP14.23□□□□□ -0.13
TRA2A-209ENST00000494255 GNASQ5JWF2 1037 aa14.23□□□□□ -0.13
TRA2A-209ENST00000494255 CCDC62Q6P9F0 684 aa14.23□□□□□ -0.13
TRA2A-209ENST00000494255 KRT25Q7Z3Z0 450 aa14.23□□□□□ -0.13
TRA2A-209ENST00000494255 PCSK9Q8NBP7 692 aaKnown RBP14.23□□□□□ -0.13
TRA2A-209ENST00000494255 GPRASP2Q96D09 838 aa14.23□□□□□ -0.13
TRA2A-209ENST00000494255 CDHR1Q96JP9 859 aa14.23□□□□□ -0.13
TRA2A-209ENST00000494255 CCDC194A0A1B0GVG4 234 aa14.22□□□□□ -0.13
TRA2A-209ENST00000494255 ARIH2O95376 493 aa14.22□□□□□ -0.13
TRA2A-209ENST00000494255 CST5P28325 142 aaPredicted RBP14.22□□□□□ -0.13
TRA2A-209ENST00000494255 KRT2P35908 639 aa14.22□□□□□ -0.13
TRA2A-209ENST00000494255 NONOQ15233 471 aaKnown RBP eCLIP14.22□□□□□ -0.133e-11■□□□□ 10.5
TRA2A-209ENST00000494255 SAFBQ15424 915 aaKnown RBP eCLIP14.22□□□□□ -0.13
TRA2A-209ENST00000494255 TMEM63BQ5T3F8 832 aa14.22□□□□□ -0.13
TRA2A-209ENST00000494255 KRT40Q6A162 431 aa14.22□□□□□ -0.13
TRA2A-209ENST00000494255 HSCBQ8IWL3 235 aa14.22□□□□□ -0.13
TRA2A-209ENST00000494255 DIS3LQ8TF46 1054 aaKnown RBP14.22□□□□□ -0.13
TRA2A-209ENST00000494255 COPS5Q92905 334 aa14.22□□□□□ -0.13
TRA2A-209ENST00000494255 SNX21Q969T3 373 aa14.22□□□□□ -0.13
TRA2A-209ENST00000494255 PAWRQ96IZ0 340 aaKnown RBP14.22□□□□□ -0.13
TRA2A-209ENST00000494255 TSEN34Q9BSV6 310 aaKnown RBP14.22□□□□□ -0.13
TRA2A-209ENST00000494255 C11orf49Q9H6J7 331 aa14.22□□□□□ -0.13
TRA2A-209ENST00000494255 DDX41Q9UJV9 622 aaKnown RBP14.22□□□□□ -0.13
TRA2A-209ENST00000494255 SMC3Q9UQE7 1217 aa14.22□□□□□ -0.13
TRA2A-209ENST00000494255 UBIAD1Q9Y5Z9 338 aa14.22□□□□□ -0.13
TRA2A-209ENST00000494255 MYH7BA7E2Y1 1941 aa14.22□□□□□ -0.13
TRA2A-209ENST00000494255 SPATA31C2B4DYI2 1134 aa14.21□□□□□ -0.13
TRA2A-209ENST00000494255 K7ELQ4 463 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms