RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 CYP4F3Q08477 520 aa3.46□□□□□ -1.86
LMNB1-207ENST00000494185 CBX2Q14781 532 aaPredicted RBP3.46□□□□□ -1.86
LMNB1-207ENST00000494185 PLEKHN1Q494U1 663 aaPredicted RBP3.46□□□□□ -1.86
LMNB1-207ENST00000494185 FAM209AQ5JX71 171 aa3.46□□□□□ -1.86
LMNB1-207ENST00000494185 SLC35F1Q5T1Q4 408 aa3.46□□□□□ -1.86
LMNB1-207ENST00000494185 FOXB2Q5VYV0 432 aa3.46□□□□□ -1.86
LMNB1-207ENST00000494185 RPTNQ6XPR3 784 aa3.46□□□□□ -1.86
LMNB1-207ENST00000494185 JAZF1Q86VZ6 243 aa3.46□□□□□ -1.86
LMNB1-207ENST00000494185 CPNE8Q86YQ8 564 aa3.46□□□□□ -1.86
LMNB1-207ENST00000494185 KREMEN2Q8NCW0 462 aa3.46□□□□□ -1.86
LMNB1-207ENST00000494185 PTPRN2Q92932 1015 aa3.46□□□□□ -1.86
LMNB1-207ENST00000494185 TSPAN17Q96FV3 270 aa3.46□□□□□ -1.86
LMNB1-207ENST00000494185 C1orf159Q96HA4 380 aa3.46□□□□□ -1.86
LMNB1-207ENST00000494185 SIGLEC10Q96LC7 697 aa3.46□□□□□ -1.86
LMNB1-207ENST00000494185 RNPC3Q96LT9 517 aaKnown RBP3.46□□□□□ -1.86
LMNB1-207ENST00000494185 DHRS4Q9BTZ2 278 aa3.46□□□□□ -1.86
LMNB1-207ENST00000494185 TMX1Q9H3N1 280 aa3.46□□□□□ -1.86
LMNB1-207ENST00000494185 CLDND1Q9NY35 253 aa3.46□□□□□ -1.86
LMNB1-207ENST00000494185 GULP1Q9UBP9 304 aa3.46□□□□□ -1.86
LMNB1-207ENST00000494185 CNOT6Q9ULM6 557 aaKnown RBP3.46□□□□□ -1.86
LMNB1-207ENST00000494185 MRPS23Q9Y3D9 190 aaKnown RBP3.46□□□□□ -1.86
LMNB1-207ENST00000494185 RWDD3Q9Y3V2 267 aa3.46□□□□□ -1.86
LMNB1-207ENST00000494185 PCDHA2Q9Y5H9 948 aa3.46□□□□□ -1.86
LMNB1-207ENST00000494185 CARMIL2Q6F5E8 1435 aa3.45□□□□□ -1.86
LMNB1-207ENST00000494185 DBX1A6NMT0 343 aa3.45□□□□□ -1.86
LMNB1-207ENST00000494185 HGSO14964 777 aaPredicted RBP3.45□□□□□ -1.86
LMNB1-207ENST00000494185 N4BP3O15049 544 aa3.45□□□□□ -1.86
LMNB1-207ENST00000494185 MED14OSP0DP75 135 aa3.45□□□□□ -1.86
LMNB1-207ENST00000494185 GRK2P25098 689 aa3.45□□□□□ -1.86
LMNB1-207ENST00000494185 GRK3P35626 688 aa3.45□□□□□ -1.86
LMNB1-207ENST00000494185 CEBPAP49715 358 aaPredicted RBP3.45□□□□□ -1.86
LMNB1-207ENST00000494185 DLG4P78352 724 aa3.45□□□□□ -1.86
LMNB1-207ENST00000494185 MVKQ03426 396 aa3.45□□□□□ -1.86
LMNB1-207ENST00000494185 TIGD5Q53EQ6 642 aa3.45□□□□□ -1.86
LMNB1-207ENST00000494185 TCERG1LQ5VWI1 586 aa3.45□□□□□ -1.86
LMNB1-207ENST00000494185 STYK1Q6J9G0 422 aa3.45□□□□□ -1.86
LMNB1-207ENST00000494185 GIMAP6Q6P9H5 292 aa3.45□□□□□ -1.86
LMNB1-207ENST00000494185 ETV3LQ6ZN32 361 aa3.45□□□□□ -1.86
LMNB1-207ENST00000494185 ATG14Q6ZNE5 492 aa3.45□□□□□ -1.86
LMNB1-207ENST00000494185 CEP68Q76N32 757 aa3.45□□□□□ -1.86
LMNB1-207ENST00000494185 HOMER1Q86YM7 354 aa3.45□□□□□ -1.86
LMNB1-207ENST00000494185 NLGN4XQ8N0W4 816 aa3.45□□□□□ -1.86
LMNB1-207ENST00000494185 FAM177A1Q8N128 213 aaPredicted RBP3.45□□□□□ -1.86
LMNB1-207ENST00000494185 EXOC2Q96KP1 924 aa3.45□□□□□ -1.86
LMNB1-207ENST00000494185 PLCD4Q9BRC7 762 aa3.45□□□□□ -1.86
LMNB1-207ENST00000494185 PHF20Q9BVI0 1012 aa3.45□□□□□ -1.86
LMNB1-207ENST00000494185 KRTAP4-7Q9BYR0 210 aa3.45□□□□□ -1.86
LMNB1-207ENST00000494185 SLKQ9H2G2 1235 aaPredicted RBP3.45□□□□□ -1.86
LMNB1-207ENST00000494185 SP110Q9HB58 689 aa3.45□□□□□ -1.86
LMNB1-207ENST00000494185 TMEM260Q9NX78 707 aa3.45□□□□□ -1.86
LMNB1-207ENST00000494185 SFMBT1Q9UHJ3 866 aa3.45□□□□□ -1.86
LMNB1-207ENST00000494185 TMEFF2Q9UIK5 374 aaPredicted RBP3.45□□□□□ -1.86
LMNB1-207ENST00000494185 ZNF652Q9Y2D9 606 aa3.45□□□□□ -1.86
LMNB1-207ENST00000494185 MRPL42Q9Y6G3 142 aaKnown RBP3.45□□□□□ -1.86
LMNB1-207ENST00000494185 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.45□□□□□ -1.86
LMNB1-207ENST00000494185 ESYT3A0FGR9 886 aa3.44□□□□□ -1.86
LMNB1-207ENST00000494185 TLDC2A0PJX2 215 aa3.44□□□□□ -1.86
LMNB1-207ENST00000494185 BLACEA4D250 179 aa3.44□□□□□ -1.86
LMNB1-207ENST00000494185 NOTOA8MTQ0 251 aa3.44□□□□□ -1.86
LMNB1-207ENST00000494185 SMARCA5O60264 1052 aaPredicted RBP3.44□□□□□ -1.86
LMNB1-207ENST00000494185 NUAK1O60285 661 aa3.44□□□□□ -1.86
LMNB1-207ENST00000494185 CDC45O75419 566 aa3.44□□□□□ -1.86
LMNB1-207ENST00000494185 NPTXRO95502 500 aa3.44□□□□□ -1.86
LMNB1-207ENST00000494185 GLI4P10075 376 aa3.44□□□□□ -1.86
LMNB1-207ENST00000494185 CYP2C8P10632 490 aa3.44□□□□□ -1.86
LMNB1-207ENST00000494185 VIPR1P32241 457 aa3.44□□□□□ -1.86
LMNB1-207ENST00000494185 NKX3-2P78367 333 aa3.44□□□□□ -1.86
LMNB1-207ENST00000494185 PAK1Q13153 545 aa3.44□□□□□ -1.86
LMNB1-207ENST00000494185 SQSTM1Q13501 440 aa3.44□□□□□ -1.86
LMNB1-207ENST00000494185 NTRK3Q16288 839 aa3.44□□□□□ -1.86
LMNB1-207ENST00000494185 KCNA10Q16322 511 aa3.44□□□□□ -1.86
LMNB1-207ENST00000494185 INF2Q27J81 1249 aa3.44□□□□□ -1.86
LMNB1-207ENST00000494185 MBLAC2Q68D91 279 aa3.44□□□□□ -1.86
LMNB1-207ENST00000494185 DENND5AQ6IQ26 1287 aa3.44□□□□□ -1.86
LMNB1-207ENST00000494185 AMIGO3Q86WK7 504 aa3.44□□□□□ -1.86
LMNB1-207ENST00000494185 CCDC103Q8IW40 242 aa3.44□□□□□ -1.86
LMNB1-207ENST00000494185 ZC3H7AQ8IWR0 971 aaKnown RBP3.44□□□□□ -1.86
LMNB1-207ENST00000494185 SP8Q8IXZ3 490 aa3.44□□□□□ -1.86
LMNB1-207ENST00000494185 Q8N1Y9 231 aa3.44□□□□□ -1.86
LMNB1-207ENST00000494185 RCBTB1Q8NDN9 531 aa3.44□□□□□ -1.86
LMNB1-207ENST00000494185 MZB1Q8WU39 189 aa3.44□□□□□ -1.86
LMNB1-207ENST00000494185 APPBP2Q92624 585 aa3.44□□□□□ -1.86
LMNB1-207ENST00000494185 KISS1RQ969F8 398 aaPredicted RBP3.44□□□□□ -1.86
LMNB1-207ENST00000494185 SHISA4Q96DD7 197 aa3.44□□□□□ -1.86
LMNB1-207ENST00000494185 MRPL4Q9BYD3 311 aaKnown RBP3.44□□□□□ -1.86
LMNB1-207ENST00000494185 KANSL2Q9H9L4 492 aa3.44□□□□□ -1.86
LMNB1-207ENST00000494185 GOLGA2P5Q9HBQ8 144 aa3.44□□□□□ -1.86
LMNB1-207ENST00000494185 TBX22Q9Y458 520 aa3.44□□□□□ -1.86
LMNB1-207ENST00000494185 PCDHB4Q9Y5E5 795 aa3.44□□□□□ -1.86
LMNB1-207ENST00000494185 NPFFR2Q9Y5X5 522 aa3.44□□□□□ -1.86
LMNB1-207ENST00000494185 X6R8D5 127 aa3.44□□□□□ -1.86
LMNB1-207ENST00000494185 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.43□□□□□ -1.86
LMNB1-207ENST00000494185 HIP1RO75146 1068 aa3.43□□□□□ -1.86
LMNB1-207ENST00000494185 NTRK1P04629 796 aa3.43□□□□□ -1.86
LMNB1-207ENST00000494185 C8AP07357 584 aa3.43□□□□□ -1.86
LMNB1-207ENST00000494185 C6orf222P0C671 652 aaPredicted RBP3.43□□□□□ -1.86
LMNB1-207ENST00000494185 GJA4P35212 333 aa3.43□□□□□ -1.86
LMNB1-207ENST00000494185 BCL6P41182 706 aa3.43□□□□□ -1.86
LMNB1-207ENST00000494185 GALK1P51570 392 aa3.43□□□□□ -1.86
LMNB1-207ENST00000494185 LINC00310P59036 64 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms