RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 RASGRP4Q8TDF6 673 aa20.87■□□□□ 0.93
COL27A1-207ENST00000494090 PANX2Q96RD6 677 aa20.87■□□□□ 0.93
COL27A1-207ENST00000494090 KANSL2Q9H9L4 492 aa20.87■□□□□ 0.93
COL27A1-207ENST00000494090 HEG1Q9ULI3 1381 aa20.87■□□□□ 0.93
COL27A1-207ENST00000494090 A0A087WWV3 80 aa20.87■□□□□ 0.93
COL27A1-207ENST00000494090 EIF3CLB5ME19 914 aaKnown RBP20.87■□□□□ 0.93
COL27A1-207ENST00000494090 THAP12O43422 761 aa20.87■□□□□ 0.93
COL27A1-207ENST00000494090 PRKAB2O43741 272 aa20.87■□□□□ 0.93
COL27A1-207ENST00000494090 RINT1Q6NUQ1 792 aa20.87■□□□□ 0.93
COL27A1-207ENST00000494090 NLRP10Q86W26 655 aa20.87■□□□□ 0.93
COL27A1-207ENST00000494090 EIF3CQ99613 913 aaKnown RBP20.87■□□□□ 0.93
COL27A1-207ENST00000494090 ANO3Q9BYT9 981 aa20.87■□□□□ 0.93
COL27A1-207ENST00000494090 SEC31AO94979 1220 aaKnown RBP20.86■□□□□ 0.93
COL27A1-207ENST00000494090 BSPRYQ5W0U4 402 aa20.86■□□□□ 0.93
COL27A1-207ENST00000494090 CC2D2BQ6DHV5 1058 aa20.86■□□□□ 0.93
COL27A1-207ENST00000494090 CCDC170Q8IYT3 715 aa20.86■□□□□ 0.93
COL27A1-207ENST00000494090 SPTLC3Q9NUV7 552 aa20.86■□□□□ 0.93
COL27A1-207ENST00000494090 FKBP3Q00688 224 aaKnown RBP20.86■□□□□ 0.93
COL27A1-207ENST00000494090 MYL7Q01449 175 aa20.86■□□□□ 0.93
COL27A1-207ENST00000494090 LMNB2Q03252 620 aa20.86■□□□□ 0.93
COL27A1-207ENST00000494090 RPS6KA2Q15349 733 aa20.86■□□□□ 0.93
COL27A1-207ENST00000494090 EEF2KMTQ96G04 330 aa20.86■□□□□ 0.93
COL27A1-207ENST00000494090 RPS6KC1Q96S38 1066 aa20.86■□□□□ 0.93
COL27A1-207ENST00000494090 FAM114A2Q9NRY5 505 aa20.86■□□□□ 0.93
COL27A1-207ENST00000494090 SAMSN1Q9NSI8 373 aaKnown RBP20.86■□□□□ 0.93
COL27A1-207ENST00000494090 ANKARQ7Z5J8 1434 aa20.86■□□□□ 0.93
COL27A1-207ENST00000494090 ERVV-1B6SEH8 477 aa20.86■□□□□ 0.93
COL27A1-207ENST00000494090 ATF2P15336 505 aa20.86■□□□□ 0.93
COL27A1-207ENST00000494090 OSBPP22059 807 aa20.86■□□□□ 0.93
COL27A1-207ENST00000494090 IRX4P78413 519 aa20.86■□□□□ 0.93
COL27A1-207ENST00000494090 CCDC38Q502W7 563 aa20.86■□□□□ 0.93
COL27A1-207ENST00000494090 ODR4Q5SWX8 454 aa20.86■□□□□ 0.93
COL27A1-207ENST00000494090 LRCH2Q5VUJ6 765 aa20.86■□□□□ 0.93
COL27A1-207ENST00000494090 RNF14Q9UBS8 474 aa20.86■□□□□ 0.93
COL27A1-207ENST00000494090 CYP4A11Q02928 519 aa20.86■□□□□ 0.93
COL27A1-207ENST00000494090 PPP2R5CQ13362 524 aa20.86■□□□□ 0.93
COL27A1-207ENST00000494090 DHX36Q9H2U1 1008 aaKnown RBP20.86■□□□□ 0.93
COL27A1-207ENST00000494090 IPO11Q9UI26 975 aaKnown RBP20.86■□□□□ 0.93
COL27A1-207ENST00000494090 AFPP02771 609 aaKnown RBP20.85■□□□□ 0.93
COL27A1-207ENST00000494090 PI16Q6UXB8 463 aa20.85■□□□□ 0.93
COL27A1-207ENST00000494090 RILPQ96NA2 401 aa20.85■□□□□ 0.93
COL27A1-207ENST00000494090 NT5C1BQ96P26 610 aa20.85■□□□□ 0.93
COL27A1-207ENST00000494090 THRAP3Q9Y2W1 955 aaKnown RBP20.85■□□□□ 0.93
COL27A1-207ENST00000494090 ERBB3P21860 1342 aa20.85■□□□□ 0.93
COL27A1-207ENST00000494090 FAM170AA1A519 330 aa20.85■□□□□ 0.93
COL27A1-207ENST00000494090 POMGNT1Q8WZA1 660 aa20.85■□□□□ 0.93
COL27A1-207ENST00000494090 SEC31BQ9NQW1 1179 aa20.85■□□□□ 0.93
COL27A1-207ENST00000494090 DLATP10515 647 aaKnown RBP20.85■□□□□ 0.93
COL27A1-207ENST00000494090 ADAT2Q7Z6V5 191 aaKnown RBP20.85■□□□□ 0.93
COL27A1-207ENST00000494090 TBCKQ8TEA7 893 aa20.85■□□□□ 0.93
COL27A1-207ENST00000494090 CCDC68Q9H2F9 335 aa20.85■□□□□ 0.93
COL27A1-207ENST00000494090 PLA2R1Q13018 1463 aa20.85■□□□□ 0.93
COL27A1-207ENST00000494090 PTPREP23469 700 aa20.85■□□□□ 0.93
COL27A1-207ENST00000494090 PSMC2P35998 433 aaKnown RBP20.85■□□□□ 0.93
COL27A1-207ENST00000494090 ZBED6P86452 979 aa20.85■□□□□ 0.93
COL27A1-207ENST00000494090 SARM1Q6SZW1 724 aa20.85■□□□□ 0.93
COL27A1-207ENST00000494090 PAGE5Q96GU1 130 aa20.85■□□□□ 0.93
COL27A1-207ENST00000494090 NOC2LQ9Y3T9 749 aaKnown RBP20.85■□□□□ 0.93
COL27A1-207ENST00000494090 ARHGAP31Q2M1Z3 1444 aa20.85■□□□□ 0.93
COL27A1-207ENST00000494090 SLC7A3Q8WY07 619 aa20.85■□□□□ 0.93
COL27A1-207ENST00000494090 RPAP1Q9BWH6 1393 aaPredicted RBP20.84■□□□□ 0.93
COL27A1-207ENST00000494090 CCNE1P24864 410 aa20.84■□□□□ 0.93
COL27A1-207ENST00000494090 BBS5Q8N3I7 341 aa20.84■□□□□ 0.93
COL27A1-207ENST00000494090 PCDHB6Q9Y5E3 794 aa20.84■□□□□ 0.93
COL27A1-207ENST00000494090 CCDC151A5D8V7 595 aa20.84■□□□□ 0.93
COL27A1-207ENST00000494090 PIK3CAP42336 1068 aa20.84■□□□□ 0.93
COL27A1-207ENST00000494090 CCDC127Q96BQ5 260 aa20.84■□□□□ 0.93
COL27A1-207ENST00000494090 ARHGEF37A1IGU5 675 aa20.84■□□□□ 0.93
COL27A1-207ENST00000494090 SOWAHDA6NJG2 315 aa20.84■□□□□ 0.93
COL27A1-207ENST00000494090 GARSP41250 739 aaKnown RBP20.84■□□□□ 0.93
COL27A1-207ENST00000494090 BFSP1Q12934 665 aa20.84■□□□□ 0.93
COL27A1-207ENST00000494090 H7C1W4 665 aa20.84■□□□□ 0.93
COL27A1-207ENST00000494090 VPS41P49754 854 aa20.84■□□□□ 0.93
COL27A1-207ENST00000494090 TMEM94Q12767 1356 aa20.83■□□□□ 0.93
COL27A1-207ENST00000494090 SEPT2Q15019 361 aa20.83■□□□□ 0.93
COL27A1-207ENST00000494090 STK38LQ9Y2H1 464 aa20.83■□□□□ 0.93
COL27A1-207ENST00000494090 PSMD2Q13200 908 aa20.83■□□□□ 0.93
COL27A1-207ENST00000494090 CDKL2Q92772 493 aa20.83■□□□□ 0.93
COL27A1-207ENST00000494090 PSMD6Q15008 389 aa20.83■□□□□ 0.92
COL27A1-207ENST00000494090 ARL6IP4Q66PJ3 421 aaKnown RBP20.83■□□□□ 0.92
COL27A1-207ENST00000494090 DPP9Q86TI2 863 aa20.83■□□□□ 0.92
COL27A1-207ENST00000494090 ACRBPQ8NEB7 543 aa20.83■□□□□ 0.92
COL27A1-207ENST00000494090 NACC1Q96RE7 527 aa20.83■□□□□ 0.92
COL27A1-207ENST00000494090 A6NJR5 290 aa20.82■□□□□ 0.92
COL27A1-207ENST00000494090 HNRNPDLO14979 420 aaKnown RBP20.82■□□□□ 0.92
COL27A1-207ENST00000494090 TOB2Q14106 344 aaPredicted RBP20.82■□□□□ 0.92
COL27A1-207ENST00000494090 PTPN21Q16825 1174 aa20.82■□□□□ 0.92
COL27A1-207ENST00000494090 PIH1D3Q9NQM4 214 aaKnown RBP20.82■□□□□ 0.92
COL27A1-207ENST00000494090 SERPINB2P05120 415 aa20.82■□□□□ 0.92
COL27A1-207ENST00000494090 ARHGAP4P98171 946 aa20.82■□□□□ 0.92
COL27A1-207ENST00000494090 SATB1Q01826 763 aa20.82■□□□□ 0.92
COL27A1-207ENST00000494090 PRPSAP1Q14558 356 aa20.82■□□□□ 0.92
COL27A1-207ENST00000494090 ZNF772Q68DY9 489 aaPredicted RBP20.82■□□□□ 0.92
COL27A1-207ENST00000494090 AP5M1Q9H0R1 490 aa20.82■□□□□ 0.92
COL27A1-207ENST00000494090 ADCY10Q96PN6 1610 aa20.82■□□□□ 0.92
COL27A1-207ENST00000494090 MIS18BP1Q6P0N0 1132 aa20.82■□□□□ 0.92
COL27A1-207ENST00000494090 ANKRD36BP1Q96IX9 119 aa20.82■□□□□ 0.92
COL27A1-207ENST00000494090 ZNF577Q9BSK1 485 aa20.82■□□□□ 0.92
COL27A1-207ENST00000494090 HEXIM1O94992 359 aaKnown RBP20.82■□□□□ 0.92
COL27A1-207ENST00000494090 RESP18Q5W5W9 173 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms