RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 LTFP02788 710 aa5.68□□□□□ -1.5
GTF3A-208ENST00000493903 NBPF7P0C2Y1 421 aaPredicted RBP5.68□□□□□ -1.5
GTF3A-208ENST00000493903 ATP2A2P16615 1042 aaKnown RBP5.68□□□□□ -1.5
GTF3A-208ENST00000493903 GRIK1P39086 918 aa5.68□□□□□ -1.5
GTF3A-208ENST00000493903 IARSP41252 1262 aaKnown RBP5.68□□□□□ -1.5
GTF3A-208ENST00000493903 KIZQ2M2Z5 673 aa5.68□□□□□ -1.5
GTF3A-208ENST00000493903 UVSSAQ2YD98 709 aa5.68□□□□□ -1.5
GTF3A-208ENST00000493903 OVCH1Q7RTY7 1134 aa5.68□□□□□ -1.5
GTF3A-208ENST00000493903 HDGFL2Q7Z4V5 671 aaPredicted RBP5.68□□□□□ -1.5
GTF3A-208ENST00000493903 C11orf96Q7Z7L8 435 aa5.68□□□□□ -1.5
GTF3A-208ENST00000493903 EFHBQ8N7U6 833 aa5.68□□□□□ -1.5
GTF3A-208ENST00000493903 C1orf162Q8NEQ5 155 aaPredicted RBP5.68□□□□□ -1.5
GTF3A-208ENST00000493903 PNISRQ8TF01 805 aaKnown RBP5.68□□□□□ -1.5
GTF3A-208ENST00000493903 SLC5A5Q92911 643 aa5.68□□□□□ -1.5
GTF3A-208ENST00000493903 TTC17Q96AE7 1141 aa5.68□□□□□ -1.5
GTF3A-208ENST00000493903 EVI5LQ96CN4 794 aa5.68□□□□□ -1.5
GTF3A-208ENST00000493903 FAXDC2Q96IV6 333 aa5.68□□□□□ -1.5
GTF3A-208ENST00000493903 MYRFLQ96LU7 910 aa5.68□□□□□ -1.5
GTF3A-208ENST00000493903 YIPF2Q9BWQ6 316 aa5.68□□□□□ -1.5
GTF3A-208ENST00000493903 USP25Q9UHP3 1055 aa5.68□□□□□ -1.5
GTF3A-208ENST00000493903 ZNF652Q9Y2D9 606 aa5.68□□□□□ -1.5
GTF3A-208ENST00000493903 MRFAP1Q9Y605 127 aa5.68□□□□□ -1.5
GTF3A-208ENST00000493903 TRIM75PA6NK02 468 aa5.67□□□□□ -1.5
GTF3A-208ENST00000493903 DHX15O43143 795 aaKnown RBP5.67□□□□□ -1.5
GTF3A-208ENST00000493903 SH3BP5O60239 455 aa5.67□□□□□ -1.5
GTF3A-208ENST00000493903 PRAMEF1O95521 474 aa5.67□□□□□ -1.5
GTF3A-208ENST00000493903 MT-CO1P00395 513 aa5.67□□□□□ -1.5
GTF3A-208ENST00000493903 FOSP01100 380 aaPredicted RBP5.67□□□□□ -1.5
GTF3A-208ENST00000493903 LPOP22079 712 aaPredicted RBP5.67□□□□□ -1.5
GTF3A-208ENST00000493903 PAX3P23760 479 aa5.67□□□□□ -1.5
GTF3A-208ENST00000493903 KIR3DL1P43629 444 aa5.67□□□□□ -1.5
GTF3A-208ENST00000493903 HTR3AP46098 478 aa5.67□□□□□ -1.5
GTF3A-208ENST00000493903 NMIQ13287 307 aaPredicted RBP5.67□□□□□ -1.5
GTF3A-208ENST00000493903 PRSS36Q5K4E3 855 aa5.67□□□□□ -1.5
GTF3A-208ENST00000493903 RCSD1Q6JBY9 416 aa5.67□□□□□ -1.5
GTF3A-208ENST00000493903 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.67□□□□□ -1.5
GTF3A-208ENST00000493903 C16orf59Q7L2K0 433 aa5.67□□□□□ -1.5
GTF3A-208ENST00000493903 EPM2AIP1Q7L775 607 aaPredicted RBP5.67□□□□□ -1.5
GTF3A-208ENST00000493903 TMC3Q7Z5M5 1100 aa5.67□□□□□ -1.5
GTF3A-208ENST00000493903 PNMA8AQ86V59 439 aaPredicted RBP5.67□□□□□ -1.5
GTF3A-208ENST00000493903 CMTR2Q8IYT2 770 aaKnown RBP5.67□□□□□ -1.5
GTF3A-208ENST00000493903 CLRN3Q8NCR9 226 aa5.67□□□□□ -1.5
GTF3A-208ENST00000493903 DIO2Q92813 273 aa5.67□□□□□ -1.5
GTF3A-208ENST00000493903 HSPBAP1Q96EW2 488 aa5.67□□□□□ -1.5
GTF3A-208ENST00000493903 MCMBPQ9BTE3 642 aa5.67□□□□□ -1.5
GTF3A-208ENST00000493903 MAF1Q9H063 256 aa5.67□□□□□ -1.5
GTF3A-208ENST00000493903 COQ6Q9Y2Z9 468 aa5.67□□□□□ -1.5
GTF3A-208ENST00000493903 TRBV23OR9-2A0A075B6M9 112 aa5.66□□□□□ -1.5
GTF3A-208ENST00000493903 PTPDC1A2A3K4 754 aa5.66□□□□□ -1.5
GTF3A-208ENST00000493903 STXBP3O00186 592 aa5.66□□□□□ -1.5
GTF3A-208ENST00000493903 GAS2O43903 313 aaKnown RBP5.66□□□□□ -1.5
GTF3A-208ENST00000493903 LRRN2O75325 713 aa5.66□□□□□ -1.5
GTF3A-208ENST00000493903 CD3EP07766 207 aa5.66□□□□□ -1.5
GTF3A-208ENST00000493903 SRGAP2CP0DJJ0 459 aa5.66□□□□□ -1.5
GTF3A-208ENST00000493903 BMP3P12645 472 aa5.66□□□□□ -1.5
GTF3A-208ENST00000493903 SEPHS1P49903 392 aa5.66□□□□□ -1.5
GTF3A-208ENST00000493903 RBM10P98175 930 aaKnown RBP5.66□□□□□ -1.5
GTF3A-208ENST00000493903 PCBP2Q15366 365 aaKnown RBP eCLIP5.66□□□□□ -1.5
GTF3A-208ENST00000493903 DDB1Q16531 1140 aa5.66□□□□□ -1.5
GTF3A-208ENST00000493903 EEF1DP3Q658K8 133 aa5.66□□□□□ -1.5
GTF3A-208ENST00000493903 OTOP1Q7RTM1 612 aa5.66□□□□□ -1.5
GTF3A-208ENST00000493903 KSR1Q8IVT5 923 aa5.66□□□□□ -1.5
GTF3A-208ENST00000493903 FAM20CQ8IXL6 584 aa5.66□□□□□ -1.5
GTF3A-208ENST00000493903 SPICE1Q8N0Z3 855 aa5.66□□□□□ -1.5
GTF3A-208ENST00000493903 DTWD2Q8NBA8 298 aa5.66□□□□□ -1.5
GTF3A-208ENST00000493903 DAGLBQ8NCG7 672 aa5.66□□□□□ -1.5
GTF3A-208ENST00000493903 FBXW5Q969U6 566 aa5.66□□□□□ -1.5
GTF3A-208ENST00000493903 E2F7Q96AV8 911 aa5.66□□□□□ -1.5
GTF3A-208ENST00000493903 MMP19Q99542 508 aa5.66□□□□□ -1.5
GTF3A-208ENST00000493903 VTA1Q9NP79 307 aa5.66□□□□□ -1.5
GTF3A-208ENST00000493903 GPRC5CQ9NQ84 441 aa5.66□□□□□ -1.5
GTF3A-208ENST00000493903 MAN1C1Q9NR34 630 aa5.66□□□□□ -1.5
GTF3A-208ENST00000493903 GPATCH2Q9NW75 528 aa5.66□□□□□ -1.5
GTF3A-208ENST00000493903 CCDC66A2RUB6 948 aa5.65□□□□□ -1.5
GTF3A-208ENST00000493903 FAM47E-STBD1D6RA91 191 aa5.65□□□□□ -1.5
GTF3A-208ENST00000493903 ARNTLO00327 626 aa5.65□□□□□ -1.5
GTF3A-208ENST00000493903 EOMESO95936 686 aa5.65□□□□□ -1.5
GTF3A-208ENST00000493903 SOD2P04179 222 aa5.65□□□□□ -1.5
GTF3A-208ENST00000493903 YBX3P16989 372 aaKnown RBP eCLIP5.65□□□□□ -1.59e-9■■□□□ 13.6
GTF3A-208ENST00000493903 RAB6AP20340 208 aa5.65□□□□□ -1.5
GTF3A-208ENST00000493903 BMP8BP34820 402 aa5.65□□□□□ -1.5
GTF3A-208ENST00000493903 CTSKP43235 329 aa5.65□□□□□ -1.5
GTF3A-208ENST00000493903 USP11P51784 963 aa5.65□□□□□ -1.5
GTF3A-208ENST00000493903 PHC1P78364 1004 aa5.65□□□□□ -1.5
GTF3A-208ENST00000493903 ST5P78524 1137 aa5.65□□□□□ -1.5
GTF3A-208ENST00000493903 SAFBQ15424 915 aaKnown RBP eCLIP5.65□□□□□ -1.5
GTF3A-208ENST00000493903 SGO2Q562F6 1265 aa5.65□□□□□ -1.5
GTF3A-208ENST00000493903 C10orf62Q5T681 223 aaPredicted RBP5.65□□□□□ -1.5
GTF3A-208ENST00000493903 GPR158Q5T848 1215 aa5.65□□□□□ -1.5
GTF3A-208ENST00000493903 CREB3L3Q68CJ9 461 aa5.65□□□□□ -1.5
GTF3A-208ENST00000493903 PGM2L1Q6PCE3 622 aa5.65□□□□□ -1.5
GTF3A-208ENST00000493903 RASSF3Q86WH2 238 aa5.65□□□□□ -1.5
GTF3A-208ENST00000493903 TICAM2Q86XR7 235 aa5.65□□□□□ -1.5
GTF3A-208ENST00000493903 CCDC103Q8IW40 242 aa5.65□□□□□ -1.5
GTF3A-208ENST00000493903 ZNF655Q8N720 491 aaPredicted RBP5.65□□□□□ -1.5
GTF3A-208ENST00000493903 C2orf69Q8N8R5 385 aa5.65□□□□□ -1.5
GTF3A-208ENST00000493903 PPM1EQ8WY54 764 aa5.65□□□□□ -1.5
GTF3A-208ENST00000493903 EZH1Q92800 747 aaPredicted RBP5.65□□□□□ -1.5
GTF3A-208ENST00000493903 FCRL3Q96P31 734 aaPredicted RBP5.65□□□□□ -1.5
GTF3A-208ENST00000493903 STRBPQ96SI9 672 aaKnown RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 905.4 ms