RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-238ENST00000493853 SLC1A4P43007 532 aa8.92□□□□□ -0.98
RBM39-238ENST00000493853 LRRC41Q15345 812 aa8.92□□□□□ -0.98
RBM39-238ENST00000493853 ZNF792Q3KQV3 632 aa8.92□□□□□ -0.98
RBM39-238ENST00000493853 FOXD4L5Q5VV16 416 aaPredicted RBP8.92□□□□□ -0.98
RBM39-238ENST00000493853 SLC39A5Q6ZMH5 540 aa8.92□□□□□ -0.98
RBM39-238ENST00000493853 LYSMD3Q7Z3D4 306 aa8.92□□□□□ -0.98
RBM39-238ENST00000493853 LRRC47Q8N1G4 583 aaKnown RBP8.92□□□□□ -0.98
RBM39-238ENST00000493853 NEDD1Q8NHV4 660 aa8.92□□□□□ -0.98
RBM39-238ENST00000493853 CRBNQ96SW2 442 aa8.92□□□□□ -0.98
RBM39-238ENST00000493853 RAVER2Q9HCJ3 691 aaKnown RBP8.92□□□□□ -0.98
RBM39-238ENST00000493853 PRDM5Q9NQX1 630 aaPredicted RBP8.92□□□□□ -0.98
RBM39-238ENST00000493853 FAM184BQ9ULE4 1060 aa8.92□□□□□ -0.98
RBM39-238ENST00000493853 SYNPO2Q9UMS6 1093 aa8.92□□□□□ -0.98
RBM39-238ENST00000493853 IGKV6D-41A0A0C4DH26 115 aa8.91□□□□□ -0.98
RBM39-238ENST00000493853 SOX1O00570 391 aaPredicted RBP8.91□□□□□ -0.98
RBM39-238ENST00000493853 ATP2A1O14983 1001 aa8.91□□□□□ -0.98
RBM39-238ENST00000493853 PGK1P00558 417 aa8.91□□□□□ -0.98
RBM39-238ENST00000493853 IGHA2P01877 340 aa8.91□□□□□ -0.98
RBM39-238ENST00000493853 VSIG8P0DPA2 414 aa8.91□□□□□ -0.98
RBM39-238ENST00000493853 MCCP23508 829 aa8.91□□□□□ -0.98
RBM39-238ENST00000493853 STAT2P52630 851 aa8.91□□□□□ -0.98
RBM39-238ENST00000493853 PDE1AP54750 535 aa8.91□□□□□ -0.98
RBM39-238ENST00000493853 AAMPQ13685 434 aa8.91□□□□□ -0.98
RBM39-238ENST00000493853 LRIT3Q3SXY7 679 aa8.91□□□□□ -0.98
RBM39-238ENST00000493853 CCDC129Q6ZRS4 1044 aa8.91□□□□□ -0.98
RBM39-238ENST00000493853 FAM160B2Q86V87 743 aa8.91□□□□□ -0.98
RBM39-238ENST00000493853 MSL3Q8N5Y2 521 aaKnown RBP8.91□□□□□ -0.98
RBM39-238ENST00000493853 DEFB123Q8N688 67 aa8.91□□□□□ -0.98
RBM39-238ENST00000493853 GMCL1P1Q8NEA9 526 aa8.91□□□□□ -0.98
RBM39-238ENST00000493853 CHST13Q8NET6 341 aa8.91□□□□□ -0.98
RBM39-238ENST00000493853 REPS2Q8NFH8 660 aa8.91□□□□□ -0.98
RBM39-238ENST00000493853 VTI1AQ96AJ9 217 aa8.91□□□□□ -0.98
RBM39-238ENST00000493853 CHMP4CQ96CF2 233 aa8.91□□□□□ -0.98
RBM39-238ENST00000493853 RWDD1Q9H446 243 aaPredicted RBP8.91□□□□□ -0.98
RBM39-238ENST00000493853 SPC25Q9HBM1 224 aa8.91□□□□□ -0.98
RBM39-238ENST00000493853 HELLSQ9NRZ9 838 aa8.91□□□□□ -0.98
RBM39-238ENST00000493853 HOMER2Q9NSB8 354 aa8.91□□□□□ -0.98
RBM39-238ENST00000493853 ZHX1Q9UKY1 873 aaPredicted RBP8.91□□□□□ -0.98
RBM39-238ENST00000493853 MTMR7Q9Y216 660 aa8.91□□□□□ -0.98
RBM39-238ENST00000493853 CDK5RAP2Q96SN8 1893 aa8.91□□□□□ -0.98
RBM39-238ENST00000493853 NAV1Q8NEY1 1877 aa8.9□□□□□ -0.98
RBM39-238ENST00000493853 SLC35F4A4IF30 521 aa8.9□□□□□ -0.98
RBM39-238ENST00000493853 TAL1P17542 331 aaPredicted RBP8.9□□□□□ -0.98
RBM39-238ENST00000493853 RNF144AP50876 292 aaPredicted RBP8.9□□□□□ -0.98
RBM39-238ENST00000493853 OAZ1P54368 228 aa8.9□□□□□ -0.98
RBM39-238ENST00000493853 HDAC1Q13547 482 aaPredicted RBP8.9□□□□□ -0.98
RBM39-238ENST00000493853 RRP12Q5JTH9 1297 aaKnown RBP8.9□□□□□ -0.98
RBM39-238ENST00000493853 RCSD1Q6JBY9 416 aa8.9□□□□□ -0.98
RBM39-238ENST00000493853 NOL8Q76FK4 1167 aaKnown RBP8.9□□□□□ -0.98
RBM39-238ENST00000493853 PRICKLE2Q7Z3G6 844 aa8.9□□□□□ -0.98
RBM39-238ENST00000493853 SLC17A8Q8NDX2 589 aa8.9□□□□□ -0.98
RBM39-238ENST00000493853 NUP133Q8WUM0 1156 aa8.9□□□□□ -0.98
RBM39-238ENST00000493853 STAG1Q8WVM7 1258 aa8.9□□□□□ -0.98
RBM39-238ENST00000493853 RILPL2Q969X0 211 aa8.9□□□□□ -0.98
RBM39-238ENST00000493853 SLC38A10Q9HBR0 1119 aa8.9□□□□□ -0.98
RBM39-238ENST00000493853 RIPK3Q9Y572 518 aa8.9□□□□□ -0.98
RBM39-238ENST00000493853 TACC3Q9Y6A5 838 aa8.9□□□□□ -0.98
RBM39-238ENST00000493853 DOCK3Q8IZD9 2030 aa8.9□□□□□ -0.99
RBM39-238ENST00000493853 SYNGAP1Q96PV0 1343 aa8.89□□□□□ -0.99
RBM39-238ENST00000493853 DCDC2CA8MYV0 355 aa8.89□□□□□ -0.99
RBM39-238ENST00000493853 ZNF865P0CJ78 1059 aaPredicted RBP8.89□□□□□ -0.99
RBM39-238ENST00000493853 ALAS1P13196 640 aa8.89□□□□□ -0.99
RBM39-238ENST00000493853 MFAP1P55081 439 aaKnown RBP8.89□□□□□ -0.99
RBM39-238ENST00000493853 TLE2Q04725 743 aa8.89□□□□□ -0.99
RBM39-238ENST00000493853 SEMA3FQ13275 785 aa8.89□□□□□ -0.99
RBM39-238ENST00000493853 ACVR2BQ13705 512 aa8.89□□□□□ -0.99
RBM39-238ENST00000493853 CCDC96Q2M329 555 aa8.89□□□□□ -0.99
RBM39-238ENST00000493853 TRIM60Q495X7 471 aa8.89□□□□□ -0.99
RBM39-238ENST00000493853 MCMDC2Q4G0Z9 681 aa8.89□□□□□ -0.99
RBM39-238ENST00000493853 B4GALNT3Q6L9W6 998 aa8.89□□□□□ -0.99
RBM39-238ENST00000493853 MAMDC4Q6UXC1 1216 aa8.89□□□□□ -0.99
RBM39-238ENST00000493853 KCTD1Q719H9 257 aa8.89□□□□□ -0.99
RBM39-238ENST00000493853 TICAM2Q86XR7 235 aa8.89□□□□□ -0.99
RBM39-238ENST00000493853 RNF135Q8IUD6 432 aa8.89□□□□□ -0.99
RBM39-238ENST00000493853 GMCL1Q96IK5 515 aa8.89□□□□□ -0.99
RBM39-238ENST00000493853 LNPKQ9C0E8 428 aa8.89□□□□□ -0.99
RBM39-238ENST00000493853 ABHD16BQ9H3Z7 469 aa8.89□□□□□ -0.99
RBM39-238ENST00000493853 OSBPL3Q9H4L5 887 aa8.89□□□□□ -0.99
RBM39-238ENST00000493853 ACAD9Q9H845 621 aa8.89□□□□□ -0.99
RBM39-238ENST00000493853 INCENPQ9NQS7 918 aa8.89□□□□□ -0.99
RBM39-238ENST00000493853 STK17AQ9UEE5 414 aa8.89□□□□□ -0.99
RBM39-238ENST00000493853 PHF24Q9UPV7 400 aa8.89□□□□□ -0.99
RBM39-238ENST00000493853 DDX60LQ5H9U9 1706 aaKnown RBP8.88□□□□□ -0.99
RBM39-238ENST00000493853 DNAJC25-GNG10A0A024R161 153 aa8.88□□□□□ -0.99
RBM39-238ENST00000493853 ASB14A6NK59 587 aa8.88□□□□□ -0.99
RBM39-238ENST00000493853 PQBP1O60828 265 aaKnown RBP8.88□□□□□ -0.99
RBM39-238ENST00000493853 DUSP11O75319 330 aaKnown RBP8.88□□□□□ -0.99
RBM39-238ENST00000493853 SNAI1O95863 264 aaPredicted RBP8.88□□□□□ -0.99
RBM39-238ENST00000493853 FGAP02671 866 aa8.88□□□□□ -0.99
RBM39-238ENST00000493853 C6orf222P0C671 652 aaPredicted RBP8.88□□□□□ -0.99
RBM39-238ENST00000493853 RAG1P15918 1043 aa8.88□□□□□ -0.99
RBM39-238ENST00000493853 ALX1Q15699 326 aa8.88□□□□□ -0.99
RBM39-238ENST00000493853 TKFCQ3LXA3 575 aa8.88□□□□□ -0.99
RBM39-238ENST00000493853 VPS53Q5VIR6 699 aa8.88□□□□□ -0.99
RBM39-238ENST00000493853 CCDC174Q6PII3 467 aa8.88□□□□□ -0.99
RBM39-238ENST00000493853 ARMCX2Q7L311 632 aa8.88□□□□□ -0.99
RBM39-238ENST00000493853 PCSK9Q8NBP7 692 aaKnown RBP8.88□□□□□ -0.99
RBM39-238ENST00000493853 BADQ92934 168 aa8.88□□□□□ -0.99
RBM39-238ENST00000493853 FAM227BQ96M60 508 aa8.88□□□□□ -0.99
RBM39-238ENST00000493853 TRERF1Q96PN7 1200 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms