RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 IFIT3O14879 490 aaKnown RBP19.31■□□□□ 0.68
PTPRU-208ENST00000493601 NR3C2P08235 984 aa19.31■□□□□ 0.68
PTPRU-208ENST00000493601 CYP21A2P08686 494 aa19.31■□□□□ 0.68
PTPRU-208ENST00000493601 ATP2A2P16615 1042 aaKnown RBP19.31■□□□□ 0.68
PTPRU-208ENST00000493601 CASTP20810 708 aaKnown RBP19.31■□□□□ 0.68
PTPRU-208ENST00000493601 GRM4Q14833 912 aa19.31■□□□□ 0.68
PTPRU-208ENST00000493601 DGKDQ16760 1214 aa19.31■□□□□ 0.68
PTPRU-208ENST00000493601 CHST3Q7LGC8 479 aa19.31■□□□□ 0.68
PTPRU-208ENST00000493601 DEFB128Q7Z7B8 93 aa19.31■□□□□ 0.68
PTPRU-208ENST00000493601 SAMD3Q8N6K7 520 aa19.31■□□□□ 0.68
PTPRU-208ENST00000493601 PPP1R13LQ8WUF5 828 aa19.31■□□□□ 0.68
PTPRU-208ENST00000493601 EMID1Q96A84 441 aaPredicted RBP19.31■□□□□ 0.68
PTPRU-208ENST00000493601 VWCEQ96DN2 955 aa19.31■□□□□ 0.68
PTPRU-208ENST00000493601 YBX2Q9Y2T7 364 aaKnown RBP19.31■□□□□ 0.68
PTPRU-208ENST00000493601 PCDHA11Q9Y5I1 949 aa19.31■□□□□ 0.68
PTPRU-208ENST00000493601 MRVI1Q9Y6F6 885 aa19.31■□□□□ 0.68
PTPRU-208ENST00000493601 PPP1R11O60927 126 aaPredicted RBP19.3■□□□□ 0.68
PTPRU-208ENST00000493601 PTH1RQ03431 593 aa19.3■□□□□ 0.68
PTPRU-208ENST00000493601 PTGISQ16647 500 aa19.3■□□□□ 0.68
PTPRU-208ENST00000493601 SESTD1Q86VW0 696 aa19.3■□□□□ 0.68
PTPRU-208ENST00000493601 HOMER1Q86YM7 354 aa19.3■□□□□ 0.68
PTPRU-208ENST00000493601 NCOA7Q8NI08 942 aa19.3■□□□□ 0.68
PTPRU-208ENST00000493601 DDX41Q9UJV9 622 aaKnown RBP19.3■□□□□ 0.68
PTPRU-208ENST00000493601 MYH7BA7E2Y1 1941 aa19.29■□□□□ 0.68
PTPRU-208ENST00000493601 TRANK1O15050 2925 aa19.29■□□□□ 0.68
PTPRU-208ENST00000493601 IQCF3P0C7M6 154 aa19.29■□□□□ 0.68
PTPRU-208ENST00000493601 WTAPQ15007 396 aa19.29■□□□□ 0.68
PTPRU-208ENST00000493601 PPP2R2DQ66LE6 453 aa19.29■□□□□ 0.68
PTPRU-208ENST00000493601 STOX1Q6ZVD7 989 aa19.29■□□□□ 0.68
PTPRU-208ENST00000493601 USP38Q8NB14 1042 aa19.29■□□□□ 0.68
PTPRU-208ENST00000493601 PPTC7Q8NI37 304 aa19.29■□□□□ 0.68
PTPRU-208ENST00000493601 CAGE1Q8TC20 777 aa19.29■□□□□ 0.68
PTPRU-208ENST00000493601 PDCD2LQ9BRP1 358 aa19.29■□□□□ 0.68
PTPRU-208ENST00000493601 KATNAL1Q9BW62 490 aa19.29■□□□□ 0.68
PTPRU-208ENST00000493601 SPTBN5Q9NRC6 3674 aaKnown RBP19.29■□□□□ 0.68
PTPRU-208ENST00000493601 MYO9BQ13459 2157 aa19.28■□□□□ 0.68
PTPRU-208ENST00000493601 E7EWF7 191 aa19.28■□□□□ 0.68
PTPRU-208ENST00000493601 SGSM2O43147 1006 aa19.28■□□□□ 0.68
PTPRU-208ENST00000493601 RABGGTBP53611 331 aa19.28■□□□□ 0.68
PTPRU-208ENST00000493601 LAMC2Q13753 1193 aa19.28■□□□□ 0.68
PTPRU-208ENST00000493601 KCNV1Q6PIU1 500 aa19.28■□□□□ 0.68
PTPRU-208ENST00000493601 KAT2BQ92831 832 aa19.28■□□□□ 0.68
PTPRU-208ENST00000493601 SLC9A7Q96T83 725 aa19.28■□□□□ 0.68
PTPRU-208ENST00000493601 RIOX1Q9H6W3 641 aa19.28■□□□□ 0.68
PTPRU-208ENST00000493601 TRIP12Q14669 1992 aaPredicted RBP19.28■□□□□ 0.68
PTPRU-208ENST00000493601 MYCLP12524 364 aaPredicted RBP19.27■□□□□ 0.68
PTPRU-208ENST00000493601 HOXA13P31271 388 aaPredicted RBP19.27■□□□□ 0.68
PTPRU-208ENST00000493601 TMEM67Q5HYA8 995 aa19.27■□□□□ 0.68
PTPRU-208ENST00000493601 GDF6Q6KF10 455 aaPredicted RBP19.27■□□□□ 0.68
PTPRU-208ENST00000493601 CATIPQ7Z7H3 387 aa19.27■□□□□ 0.68
PTPRU-208ENST00000493601 DHX37Q8IY37 1157 aaKnown RBP19.27■□□□□ 0.68
PTPRU-208ENST00000493601 C7orf31Q8N865 590 aa19.27■□□□□ 0.68
PTPRU-208ENST00000493601 AFAP1L1Q8TED9 768 aa19.27■□□□□ 0.68
PTPRU-208ENST00000493601 SYMPKQ92797 1274 aaKnown RBP19.27■□□□□ 0.68
PTPRU-208ENST00000493601 PIGSQ96S52 555 aa19.27■□□□□ 0.68
PTPRU-208ENST00000493601 FTOQ9C0B1 505 aaKnown RBP eCLIP19.27■□□□□ 0.68
PTPRU-208ENST00000493601 BAZ2BQ9UIF8 2168 aaKnown RBP19.26■□□□□ 0.67
PTPRU-208ENST00000493601 PNMA6FA0A0J9YX94 578 aa19.26■□□□□ 0.67
PTPRU-208ENST00000493601 GCOM1H8Y6P7 765 aaPredicted RBP19.26■□□□□ 0.67
PTPRU-208ENST00000493601 BAIAP3O94812 1187 aa19.26■□□□□ 0.67
PTPRU-208ENST00000493601 F2P00734 622 aa19.26■□□□□ 0.67
PTPRU-208ENST00000493601 POLR2MP0CAP2 368 aa19.26■□□□□ 0.67
PTPRU-208ENST00000493601 CCND2P30279 289 aa19.26■□□□□ 0.67
PTPRU-208ENST00000493601 IRX6P78412 446 aaPredicted RBP19.26■□□□□ 0.67
PTPRU-208ENST00000493601 TROAPQ12815 778 aa19.26■□□□□ 0.67
PTPRU-208ENST00000493601 PGM5Q15124 567 aa19.26■□□□□ 0.67
PTPRU-208ENST00000493601 SENP2Q9HC62 589 aa19.26■□□□□ 0.67
PTPRU-208ENST00000493601 GTF2IRD1Q9UHL9 959 aa19.26■□□□□ 0.67
PTPRU-208ENST00000493601 TAF6LQ9Y6J9 622 aa19.26■□□□□ 0.67
PTPRU-208ENST00000493601 PARNO95453 639 aaKnown RBP19.25■□□□□ 0.67
PTPRU-208ENST00000493601 ZNF286BP0CG31 522 aa19.25■□□□□ 0.67
PTPRU-208ENST00000493601 HOXD8P13378 290 aaPredicted RBP19.25■□□□□ 0.67
PTPRU-208ENST00000493601 MYOGP15173 224 aa19.25■□□□□ 0.67
PTPRU-208ENST00000493601 IGFBP4P22692 258 aa19.25■□□□□ 0.67
PTPRU-208ENST00000493601 PSEN2P49810 448 aa19.25■□□□□ 0.67
PTPRU-208ENST00000493601 ADGRE1Q14246 886 aa19.25■□□□□ 0.67
PTPRU-208ENST00000493601 MFSD10Q14728 455 aa19.25■□□□□ 0.67
PTPRU-208ENST00000493601 SLC35G1Q2M3R5 365 aa19.25■□□□□ 0.67
PTPRU-208ENST00000493601 VSIG10LQ86VR7 867 aa19.25■□□□□ 0.67
PTPRU-208ENST00000493601 PHOSPHO2Q8TCD6 241 aa19.25■□□□□ 0.67
PTPRU-208ENST00000493601 MAP4K1Q92918 833 aa19.25■□□□□ 0.67
PTPRU-208ENST00000493601 CTAGE1Q96RT6 745 aa19.25■□□□□ 0.67
PTPRU-208ENST00000493601 REV3LO60673 3130 aa19.25■□□□□ 0.67
PTPRU-208ENST00000493601 CYTH3O43739 400 aa19.24■□□□□ 0.67
PTPRU-208ENST00000493601 RGS20O76081 388 aa19.24■□□□□ 0.67
PTPRU-208ENST00000493601 TGFB3P10600 412 aa19.24■□□□□ 0.67
PTPRU-208ENST00000493601 SELPP16109 830 aa19.24■□□□□ 0.67
PTPRU-208ENST00000493601 RBL2Q08999 1139 aa19.24■□□□□ 0.67
PTPRU-208ENST00000493601 KIAA0753Q2KHM9 967 aa19.24■□□□□ 0.67
PTPRU-208ENST00000493601 TJAP1Q5JTD0 557 aa19.24■□□□□ 0.67
PTPRU-208ENST00000493601 CELF3Q5SZQ8 465 aaKnown RBP19.24■□□□□ 0.67
PTPRU-208ENST00000493601 LRRC8DQ7L1W4 858 aa19.24■□□□□ 0.67
PTPRU-208ENST00000493601 MB21D2Q8IYB1 491 aaPredicted RBP19.24■□□□□ 0.67
PTPRU-208ENST00000493601 IL31RAQ8NI17 732 aa19.24■□□□□ 0.67
PTPRU-208ENST00000493601 PPM1EQ8WY54 764 aa19.24■□□□□ 0.67
PTPRU-208ENST00000493601 RBM8AQ9Y5S9 174 aaKnown RBP19.24■□□□□ 0.67
PTPRU-208ENST00000493601 TET1Q8NFU7 2136 aa19.24■□□□□ 0.67
PTPRU-208ENST00000493601 GGPS1O95749 300 aa19.23■□□□□ 0.67
PTPRU-208ENST00000493601 CA3P07451 260 aa19.23■□□□□ 0.67
PTPRU-208ENST00000493601 ANTXR2P58335 489 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms