RNA–Protein interactions for RNA: ENST00000493542.1

TCN2-207, Transcript of transcobalamin 2, humanhuman

TSL 3

Gene TCN2, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN2-207ENST00000493542 LAMA4Q16363 1823 aa10.89□□□□□ -0.67
TCN2-207ENST00000493542 DCXO43602 365 aa10.89□□□□□ -0.67
TCN2-207ENST00000493542 REC8O95072 547 aa10.89□□□□□ -0.67
TCN2-207ENST00000493542 IQCF3P0C7M6 154 aa10.89□□□□□ -0.67
TCN2-207ENST00000493542 RFC2P35250 354 aa10.89□□□□□ -0.67
TCN2-207ENST00000493542 SLC16A2P36021 539 aa10.89□□□□□ -0.67
TCN2-207ENST00000493542 PURAQ00577 322 aaKnown RBP10.89□□□□□ -0.67
TCN2-207ENST00000493542 BAATQ14032 418 aaPredicted RBP10.89□□□□□ -0.67
TCN2-207ENST00000493542 ADCK5Q3MIX3 580 aa10.89□□□□□ -0.67
TCN2-207ENST00000493542 PTCRAQ6ISU1 281 aaPredicted RBP10.89□□□□□ -0.67
TCN2-207ENST00000493542 KIAA1211Q6ZU35 1233 aa10.89□□□□□ -0.67
TCN2-207ENST00000493542 PPP1R13LQ8WUF5 828 aa10.89□□□□□ -0.67
TCN2-207ENST00000493542 DCAF4Q8WV16 495 aa10.89□□□□□ -0.67
TCN2-207ENST00000493542 CLEC4DQ8WXI8 215 aa10.89□□□□□ -0.67
TCN2-207ENST00000493542 TBC1D32Q96NH3 1257 aa10.89□□□□□ -0.67
TCN2-207ENST00000493542 PHOX2BQ99453 314 aa10.89□□□□□ -0.67
TCN2-207ENST00000493542 KCNH6Q9H252 994 aa10.89□□□□□ -0.67
TCN2-207ENST00000493542 SNX14Q9Y5W7 946 aa10.89□□□□□ -0.67
TCN2-207ENST00000493542 WDFY4Q6ZS81 3184 aa10.89□□□□□ -0.67
TCN2-207ENST00000493542 COL4A4P53420 1690 aaPredicted RBP10.89□□□□□ -0.67
TCN2-207ENST00000493542 LOC102724159A0A0B4J2E5 919 aa10.88□□□□□ -0.67
TCN2-207ENST00000493542 POTEB3A0JP26 581 aa10.88□□□□□ -0.67
TCN2-207ENST00000493542 GRXCR2A6NFK2 248 aa10.88□□□□□ -0.67
TCN2-207ENST00000493542 RANBP6O60518 1105 aaKnown RBP10.88□□□□□ -0.67
TCN2-207ENST00000493542 EDNRBP24530 442 aa10.88□□□□□ -0.67
TCN2-207ENST00000493542 KCNJ6P48051 423 aa10.88□□□□□ -0.67
TCN2-207ENST00000493542 PWP2Q15269 919 aaKnown RBP10.88□□□□□ -0.67
TCN2-207ENST00000493542 FAM47CQ5HY64 1035 aa10.88□□□□□ -0.67
TCN2-207ENST00000493542 SYDE2Q5VT97 1194 aa10.88□□□□□ -0.67
TCN2-207ENST00000493542 POTEBQ6S5H4 581 aa10.88□□□□□ -0.67
TCN2-207ENST00000493542 CASC1Q6TDU7 716 aa10.88□□□□□ -0.67
TCN2-207ENST00000493542 SLC30A10Q6XR72 485 aa10.88□□□□□ -0.67
TCN2-207ENST00000493542 RETREG2Q8NC44 543 aa10.88□□□□□ -0.67
TCN2-207ENST00000493542 TMEM47Q9BQJ4 181 aa10.88□□□□□ -0.67
TCN2-207ENST00000493542 ZBED2Q9BTP6 218 aa10.88□□□□□ -0.67
TCN2-207ENST00000493542 WDR11Q9BZH6 1224 aa10.88□□□□□ -0.67
TCN2-207ENST00000493542 SUGCTQ9HAC7 445 aa10.88□□□□□ -0.67
TCN2-207ENST00000493542 TCP11L1Q9NUJ3 509 aa10.88□□□□□ -0.67
TCN2-207ENST00000493542 MTMR7Q9Y216 660 aa10.88□□□□□ -0.67
TCN2-207ENST00000493542 FRMPD2Q68DX3 1309 aaPredicted RBP10.87□□□□□ -0.67
TCN2-207ENST00000493542 MYL3P08590 195 aa10.87□□□□□ -0.67
TCN2-207ENST00000493542 PDHBP11177 359 aa10.87□□□□□ -0.67
TCN2-207ENST00000493542 ANTXR2P58335 489 aa10.87□□□□□ -0.67
TCN2-207ENST00000493542 HAND2P61296 217 aa10.87□□□□□ -0.67
TCN2-207ENST00000493542 EXOSC10Q01780 885 aaKnown RBP10.87□□□□□ -0.67
TCN2-207ENST00000493542 CCDC96Q2M329 555 aa10.87□□□□□ -0.67
TCN2-207ENST00000493542 MB21D2Q8IYB1 491 aaPredicted RBP10.87□□□□□ -0.67
TCN2-207ENST00000493542 POLR3EQ9NVU0 708 aa10.87□□□□□ -0.67
TCN2-207ENST00000493542 ADD3Q9UEY8 706 aaKnown RBP10.87□□□□□ -0.67
TCN2-207ENST00000493542 CTNNA3Q9UI47 895 aa10.87□□□□□ -0.67
TCN2-207ENST00000493542 MYH7BA7E2Y1 1941 aa10.87□□□□□ -0.67
TCN2-207ENST00000493542 NEDD4P46934 1319 aa10.86□□□□□ -0.67
TCN2-207ENST00000493542 E7EWF7 191 aa10.86□□□□□ -0.67
TCN2-207ENST00000493542 H3BQ06 376 aaPredicted RBP10.86□□□□□ -0.67
TCN2-207ENST00000493542 PITPNM1O00562 1244 aa10.86□□□□□ -0.67
TCN2-207ENST00000493542 BAIAP3O94812 1187 aa10.86□□□□□ -0.67
TCN2-207ENST00000493542 SNHG28P0DPA3 235 aa10.86□□□□□ -0.67
TCN2-207ENST00000493542 TOP1P11387 765 aaKnown RBP10.86□□□□□ -0.67
TCN2-207ENST00000493542 ANAPC15P60006 121 aa10.86□□□□□ -0.67
TCN2-207ENST00000493542 ERVK-21P61565 698 aa10.86□□□□□ -0.67
TCN2-207ENST00000493542 WDR5P61964 334 aaKnown RBP10.86□□□□□ -0.67
TCN2-207ENST00000493542 DEFB103AP81534 67 aa10.86□□□□□ -0.67
TCN2-207ENST00000493542 NBPF20Q3BBV1 942 aa10.86□□□□□ -0.67
TCN2-207ENST00000493542 HFE2Q6ZVN8 426 aa10.86□□□□□ -0.67
TCN2-207ENST00000493542 COPS5Q92905 334 aa10.86□□□□□ -0.67
TCN2-207ENST00000493542 MTG1Q9BT17 334 aaPredicted RBP10.86□□□□□ -0.67
TCN2-207ENST00000493542 GPCPD1Q9NPB8 672 aa10.86□□□□□ -0.67
TCN2-207ENST00000493542 PTPDC1A2A3K4 754 aa10.85□□□□□ -0.67
TCN2-207ENST00000493542 A6NJR5 290 aa10.85□□□□□ -0.67
TCN2-207ENST00000493542 ZNF213O14771 459 aa10.85□□□□□ -0.67
TCN2-207ENST00000493542 ARIH2O95376 493 aa10.85□□□□□ -0.67
TCN2-207ENST00000493542 CALML3P27482 149 aa10.85□□□□□ -0.67
TCN2-207ENST00000493542 CPT1AP50416 773 aa10.85□□□□□ -0.67
TCN2-207ENST00000493542 RPS6P62753 249 aaKnown RBP10.85□□□□□ -0.67
TCN2-207ENST00000493542 ZNF543Q08ER8 600 aa10.85□□□□□ -0.67
TCN2-207ENST00000493542 RNF207Q6ZRF8 634 aa10.85□□□□□ -0.67
TCN2-207ENST00000493542 CYB5R4Q7L1T6 521 aa10.85□□□□□ -0.67
TCN2-207ENST00000493542 FBXL16Q8N461 479 aa10.85□□□□□ -0.67
TCN2-207ENST00000493542 OR6J1Q8NGC5 347 aa10.85□□□□□ -0.67
TCN2-207ENST00000493542 TGS1Q96RS0 853 aaKnown RBP10.85□□□□□ -0.67
TCN2-207ENST00000493542 CTAGE1Q96RT6 745 aa10.85□□□□□ -0.67
TCN2-207ENST00000493542 AGXT2Q9BYV1 514 aa10.85□□□□□ -0.67
TCN2-207ENST00000493542 C22orf23Q9BZE7 217 aa10.85□□□□□ -0.67
TCN2-207ENST00000493542 TM6SF1Q9BZW5 370 aa10.85□□□□□ -0.67
TCN2-207ENST00000493542 ZSWIM6Q9HCJ5 1215 aa10.85□□□□□ -0.67
TCN2-207ENST00000493542 GPHNQ9NQX3 736 aaPredicted RBP10.85□□□□□ -0.67
TCN2-207ENST00000493542 WDR19Q8NEZ3 1342 aa10.84□□□□□ -0.67
TCN2-207ENST00000493542 BRWD1Q9NSI6 2320 aa10.84□□□□□ -0.67
TCN2-207ENST00000493542 USP34Q70CQ2 3546 aa10.84□□□□□ -0.67
TCN2-207ENST00000493542 LINC01553A4QN01 128 aa10.84□□□□□ -0.67
TCN2-207ENST00000493542 RBAK-RBAKDNI3L0D1 243 aa10.84□□□□□ -0.67
TCN2-207ENST00000493542 NKRFO15226 690 aaKnown RBP eCLIP10.84□□□□□ -0.67
TCN2-207ENST00000493542 PCP11498 1178 aaKnown RBP10.84□□□□□ -0.67
TCN2-207ENST00000493542 BFSP2Q13515 415 aa10.84□□□□□ -0.67
TCN2-207ENST00000493542 GPNMBQ14956 572 aa10.84□□□□□ -0.67
TCN2-207ENST00000493542 IMMTQ16891 758 aaKnown RBP10.84□□□□□ -0.67
TCN2-207ENST00000493542 PUS10Q3MIT2 529 aaKnown RBP10.84□□□□□ -0.67
TCN2-207ENST00000493542 FAM117BQ6P1L5 589 aa10.84□□□□□ -0.67
TCN2-207ENST00000493542 NFRKBQ6P4R8 1299 aa10.84□□□□□ -0.67
TCN2-207ENST00000493542 CCDC62Q6P9F0 684 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms