RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 SCG2P13521 617 aa12.25□□□□□ -0.45
CDC42SE1-206ENST00000492796 IFNAR1P17181 557 aa12.25□□□□□ -0.45
CDC42SE1-206ENST00000492796 RTP1P59025 263 aa12.25□□□□□ -0.45
CDC42SE1-206ENST00000492796 AKAP17AQ02040 695 aaKnown RBP12.25□□□□□ -0.45
CDC42SE1-206ENST00000492796 NTRK3Q16288 839 aa12.25□□□□□ -0.45
CDC42SE1-206ENST00000492796 PFKFB3Q16875 520 aaPredicted RBP12.25□□□□□ -0.45
CDC42SE1-206ENST00000492796 BRDTQ58F21 947 aaPredicted RBP12.25□□□□□ -0.45
CDC42SE1-206ENST00000492796 XRRA1Q6P2D8 792 aa12.25□□□□□ -0.45
CDC42SE1-206ENST00000492796 KCNV1Q6PIU1 500 aa12.25□□□□□ -0.45
CDC42SE1-206ENST00000492796 USP17L6PQ6QN14 398 aa12.25□□□□□ -0.45
CDC42SE1-206ENST00000492796 SEPT14Q6ZU15 432 aa12.25□□□□□ -0.45
CDC42SE1-206ENST00000492796 OR6J1Q8NGC5 347 aa12.25□□□□□ -0.45
CDC42SE1-206ENST00000492796 CCDC12Q8WUD4 166 aaPredicted RBP12.25□□□□□ -0.45
CDC42SE1-206ENST00000492796 FERMT2Q96AC1 680 aa12.25□□□□□ -0.45
CDC42SE1-206ENST00000492796 SPDYE3A6NKU9 549 aa12.24□□□□□ -0.45
CDC42SE1-206ENST00000492796 STXBP3O00186 592 aa12.24□□□□□ -0.45
CDC42SE1-206ENST00000492796 GH1P01241 217 aa12.24□□□□□ -0.45
CDC42SE1-206ENST00000492796 CCT2P78371 535 aaKnown RBP12.24□□□□□ -0.45
CDC42SE1-206ENST00000492796 IRX5P78411 483 aaPredicted RBP12.24□□□□□ -0.45
CDC42SE1-206ENST00000492796 BEX3Q00994 111 aa12.24□□□□□ -0.45
CDC42SE1-206ENST00000492796 GNPTABQ3T906 1256 aa12.24□□□□□ -0.45
CDC42SE1-206ENST00000492796 TMEM63BQ5T3F8 832 aa12.24□□□□□ -0.45
CDC42SE1-206ENST00000492796 PCNX4Q63HM2 1172 aa12.24□□□□□ -0.45
CDC42SE1-206ENST00000492796 MROH7Q68CQ1 1323 aa12.24□□□□□ -0.45
CDC42SE1-206ENST00000492796 CCDC62Q6P9F0 684 aa12.24□□□□□ -0.45
CDC42SE1-206ENST00000492796 CPLX2Q6PUV4 134 aaKnown RBP12.24□□□□□ -0.45
CDC42SE1-206ENST00000492796 IL31RAQ8NI17 732 aa12.24□□□□□ -0.45
CDC42SE1-206ENST00000492796 SEZ6LQ9BYH1 1024 aa12.24□□□□□ -0.45
CDC42SE1-206ENST00000492796 EHMT1Q9H9B1 1298 aa12.24□□□□□ -0.45
CDC42SE1-206ENST00000492796 RIC8AQ9NPQ8 531 aa12.24□□□□□ -0.45
CDC42SE1-206ENST00000492796 POLR3EQ9NVU0 708 aa12.24□□□□□ -0.45
CDC42SE1-206ENST00000492796 MRVI1Q9Y6F6 885 aa12.24□□□□□ -0.45
CDC42SE1-206ENST00000492796 A0A0U1RQG5 324 aaPredicted RBP12.23□□□□□ -0.45
CDC42SE1-206ENST00000492796 ESYT2A0FGR8 921 aa12.23□□□□□ -0.45
CDC42SE1-206ENST00000492796 A6NJR5 290 aa12.23□□□□□ -0.45
CDC42SE1-206ENST00000492796 CPLX1O14810 134 aa12.23□□□□□ -0.45
CDC42SE1-206ENST00000492796 RGS20O76081 388 aa12.23□□□□□ -0.45
CDC42SE1-206ENST00000492796 ARIH2O95376 493 aa12.23□□□□□ -0.45
CDC42SE1-206ENST00000492796 TGFB3P10600 412 aa12.23□□□□□ -0.45
CDC42SE1-206ENST00000492796 ADCY7P51828 1080 aa12.23□□□□□ -0.45
CDC42SE1-206ENST00000492796 TRIM60Q495X7 471 aa12.23□□□□□ -0.45
CDC42SE1-206ENST00000492796 TYW1BQ6NUM6 668 aa12.23□□□□□ -0.45
CDC42SE1-206ENST00000492796 TRIM22Q8IYM9 498 aa12.23□□□□□ -0.45
CDC42SE1-206ENST00000492796 CCDC148Q8NFR7 591 aa12.23□□□□□ -0.45
CDC42SE1-206ENST00000492796 PHKBQ93100 1093 aa12.23□□□□□ -0.45
CDC42SE1-206ENST00000492796 EMID1Q96A84 441 aaPredicted RBP12.23□□□□□ -0.45
CDC42SE1-206ENST00000492796 TOX2Q96NM4 488 aa12.23□□□□□ -0.45
CDC42SE1-206ENST00000492796 INPP4AQ96PE3 977 aaPredicted RBP12.23□□□□□ -0.45
CDC42SE1-206ENST00000492796 NCOA5Q9HCD5 579 aaKnown RBP12.23□□□□□ -0.45
CDC42SE1-206ENST00000492796 DDX41Q9UJV9 622 aaKnown RBP12.23□□□□□ -0.45
CDC42SE1-206ENST00000492796 ATP11BQ9Y2G3 1177 aa12.23□□□□□ -0.45
CDC42SE1-206ENST00000492796 LTBP2Q14767 1821 aa12.23□□□□□ -0.45
CDC42SE1-206ENST00000492796 SMCO2A6NFE2 343 aa12.22□□□□□ -0.45
CDC42SE1-206ENST00000492796 KPNA6O60684 536 aa12.22□□□□□ -0.45
CDC42SE1-206ENST00000492796 CDKL5O76039 1030 aa12.22□□□□□ -0.45
CDC42SE1-206ENST00000492796 FOSP01100 380 aaPredicted RBP12.22□□□□□ -0.45
CDC42SE1-206ENST00000492796 PTGS1P23219 599 aa12.22□□□□□ -0.45
CDC42SE1-206ENST00000492796 ICAM3P32942 547 aa12.22□□□□□ -0.45
CDC42SE1-206ENST00000492796 AK2P54819 239 aa12.22□□□□□ -0.45
CDC42SE1-206ENST00000492796 ARHGAP1Q07960 439 aa12.22□□□□□ -0.45
CDC42SE1-206ENST00000492796 AP3B2Q13367 1082 aa12.22□□□□□ -0.45
CDC42SE1-206ENST00000492796 PKN1Q16512 942 aa12.22□□□□□ -0.45
CDC42SE1-206ENST00000492796 UBE2SQ16763 222 aa12.22□□□□□ -0.45
CDC42SE1-206ENST00000492796 LY6KQ17RY6 165 aa12.22□□□□□ -0.45
CDC42SE1-206ENST00000492796 MCTP2Q6DN12 878 aa12.22□□□□□ -0.45
CDC42SE1-206ENST00000492796 CXCL17Q6UXB2 119 aa12.22□□□□□ -0.45
CDC42SE1-206ENST00000492796 ANKRD33Q7Z3H0 272 aa12.22□□□□□ -0.45
CDC42SE1-206ENST00000492796 COPS5Q92905 334 aa12.22□□□□□ -0.45
CDC42SE1-206ENST00000492796 SLC26A6Q9BXS9 759 aa12.22□□□□□ -0.45
CDC42SE1-206ENST00000492796 ZMYND12Q9H0C1 365 aa12.22□□□□□ -0.45
CDC42SE1-206ENST00000492796 SLKQ9H2G2 1235 aaPredicted RBP12.22□□□□□ -0.45
CDC42SE1-206ENST00000492796 C6orf50Q9HD87 102 aa12.22□□□□□ -0.45
CDC42SE1-206ENST00000492796 PRKAG2Q9UGJ0 569 aa12.22□□□□□ -0.45
CDC42SE1-206ENST00000492796 PCDHA6Q9UN73 950 aa12.22□□□□□ -0.45
CDC42SE1-206ENST00000492796 PCDHA8Q9Y5H6 950 aa12.22□□□□□ -0.45
CDC42SE1-206ENST00000492796 ARVCFO00192 962 aa12.21□□□□□ -0.45
CDC42SE1-206ENST00000492796 FIBPO43427 364 aa12.21□□□□□ -0.45
CDC42SE1-206ENST00000492796 PFKFB2O60825 505 aa12.21□□□□□ -0.45
CDC42SE1-206ENST00000492796 DEXIO95424 95 aa12.21□□□□□ -0.45
CDC42SE1-206ENST00000492796 MMP3P08254 477 aa12.21□□□□□ -0.45
CDC42SE1-206ENST00000492796 UBA1P22314 1058 aaKnown RBP12.21□□□□□ -0.45
CDC42SE1-206ENST00000492796 GNA11P29992 359 aa12.21□□□□□ -0.45
CDC42SE1-206ENST00000492796 CLK2P49760 499 aaKnown RBP12.21□□□□□ -0.45
CDC42SE1-206ENST00000492796 MRPS9P82933 396 aaKnown RBP12.21□□□□□ -0.45
CDC42SE1-206ENST00000492796 PURAQ00577 322 aaKnown RBP12.21□□□□□ -0.45
CDC42SE1-206ENST00000492796 TLE2Q04725 743 aa12.21□□□□□ -0.45
CDC42SE1-206ENST00000492796 SSRP1Q08945 709 aaKnown RBP12.21□□□□□ -0.45
CDC42SE1-206ENST00000492796 SCRN1Q12765 414 aa12.21□□□□□ -0.45
CDC42SE1-206ENST00000492796 STK3Q13188 491 aa12.21□□□□□ -0.45
CDC42SE1-206ENST00000492796 LAMC2Q13753 1193 aa12.21□□□□□ -0.45
CDC42SE1-206ENST00000492796 NLRX1Q86UT6 975 aa12.21□□□□□ -0.45
CDC42SE1-206ENST00000492796 FAM177A1Q8N128 213 aaPredicted RBP12.21□□□□□ -0.45
CDC42SE1-206ENST00000492796 PPTC7Q8NI37 304 aa12.21□□□□□ -0.45
CDC42SE1-206ENST00000492796 BICD2Q8TD16 824 aa12.21□□□□□ -0.45
CDC42SE1-206ENST00000492796 VTI1AQ96AJ9 217 aa12.21□□□□□ -0.45
CDC42SE1-206ENST00000492796 CDHR1Q96JP9 859 aa12.21□□□□□ -0.45
CDC42SE1-206ENST00000492796 MTG1Q9BT17 334 aaPredicted RBP12.21□□□□□ -0.45
CDC42SE1-206ENST00000492796 SH3GLB2Q9NR46 395 aa12.21□□□□□ -0.45
CDC42SE1-206ENST00000492796 TPCN1Q9ULQ1 816 aa12.21□□□□□ -0.45
CDC42SE1-206ENST00000492796 ZMYND8Q9ULU4 1186 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms