RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 DCDC2CA8MYV0 355 aa5.33□□□□□ -1.56
UBR4-215ENST00000492606 TCP10L2B9ZVM9 353 aa5.33□□□□□ -1.56
UBR4-215ENST00000492606 TGFBR3LH3BV60 316 aa5.33□□□□□ -1.56
UBR4-215ENST00000492606 THBS1P07996 1170 aa5.33□□□□□ -1.56
UBR4-215ENST00000492606 DNM1Q05193 864 aaKnown RBP5.33□□□□□ -1.56
UBR4-215ENST00000492606 TRIP4Q15650 581 aaPredicted RBP5.33□□□□□ -1.56
UBR4-215ENST00000492606 ENOX2Q16206 610 aaKnown RBP5.33□□□□□ -1.56
UBR4-215ENST00000492606 PTPN21Q16825 1174 aa5.33□□□□□ -1.56
UBR4-215ENST00000492606 KRTAP21-3Q3LHN1 58 aa5.33□□□□□ -1.56
UBR4-215ENST00000492606 GNASQ5JWF2 1037 aa5.33□□□□□ -1.56
UBR4-215ENST00000492606 IER5Q5VY09 327 aa5.33□□□□□ -1.56
UBR4-215ENST00000492606 GADL1Q6ZQY3 521 aa5.33□□□□□ -1.56
UBR4-215ENST00000492606 PPP1R42Q7Z4L9 355 aa5.33□□□□□ -1.56
UBR4-215ENST00000492606 PRRT2Q7Z6L0 340 aaPredicted RBP5.33□□□□□ -1.56
UBR4-215ENST00000492606 GPR152Q8TDT2 470 aa5.33□□□□□ -1.56
UBR4-215ENST00000492606 FAM84BQ96KN1 310 aaPredicted RBP5.33□□□□□ -1.56
UBR4-215ENST00000492606 UTP14AQ9BVJ6 771 aaKnown RBP5.33□□□□□ -1.56
UBR4-215ENST00000492606 POLMQ9NP87 494 aaPredicted RBP5.33□□□□□ -1.56
UBR4-215ENST00000492606 CLDND1Q9NY35 253 aa5.33□□□□□ -1.56
UBR4-215ENST00000492606 ANKIB1Q9P2G1 1089 aa5.33□□□□□ -1.56
UBR4-215ENST00000492606 ZNF70Q9UC06 446 aaPredicted RBP5.33□□□□□ -1.56
UBR4-215ENST00000492606 HCN2Q9UL51 889 aa5.33□□□□□ -1.56
UBR4-215ENST00000492606 USP20Q9Y2K6 914 aa5.33□□□□□ -1.56
UBR4-215ENST00000492606 SLC45A1Q9Y2W3 748 aa5.33□□□□□ -1.56
UBR4-215ENST00000492606 SMCHD1A6NHR9 2005 aa5.33□□□□□ -1.56
UBR4-215ENST00000492606 RFX7Q2KHR2 1363 aa5.32□□□□□ -1.56
UBR4-215ENST00000492606 UMODL1Q5DID0 1318 aa5.32□□□□□ -1.56
UBR4-215ENST00000492606 F8W031 263 aaPredicted RBP5.32□□□□□ -1.56
UBR4-215ENST00000492606 CXCL11O14625 94 aa5.32□□□□□ -1.56
UBR4-215ENST00000492606 MYO1BO43795 1136 aa5.32□□□□□ -1.56
UBR4-215ENST00000492606 MAFO75444 373 aaPredicted RBP5.32□□□□□ -1.56
UBR4-215ENST00000492606 ICAM3P32942 547 aa5.32□□□□□ -1.56
UBR4-215ENST00000492606 SMCPP49901 116 aaPredicted RBP5.32□□□□□ -1.56
UBR4-215ENST00000492606 CLCN5P51795 746 aa5.32□□□□□ -1.56
UBR4-215ENST00000492606 ORC1Q13415 861 aa5.32□□□□□ -1.56
UBR4-215ENST00000492606 AAMPQ13685 434 aa5.32□□□□□ -1.56
UBR4-215ENST00000492606 TTLL4Q14679 1199 aa5.32□□□□□ -1.56
UBR4-215ENST00000492606 C6orf118Q5T5N4 469 aa5.32□□□□□ -1.56
UBR4-215ENST00000492606 CWF19L1Q69YN2 538 aaKnown RBP5.32□□□□□ -1.56
UBR4-215ENST00000492606 TTLL5Q6EMB2 1281 aa5.32□□□□□ -1.56
UBR4-215ENST00000492606 ZFPM1Q8IX07 1006 aa5.32□□□□□ -1.56
UBR4-215ENST00000492606 GPR161Q8N6U8 529 aaKnown RBP5.32□□□□□ -1.56
UBR4-215ENST00000492606 DTWD2Q8NBA8 298 aa5.32□□□□□ -1.56
UBR4-215ENST00000492606 BACH2Q9BYV9 841 aa5.32□□□□□ -1.56
UBR4-215ENST00000492606 NCDNQ9UBB6 729 aa5.32□□□□□ -1.56
UBR4-215ENST00000492606 POLKQ9UBT6 870 aa5.32□□□□□ -1.56
UBR4-215ENST00000492606 PARP2Q9UGN5 583 aa5.32□□□□□ -1.56
UBR4-215ENST00000492606 USP18Q9UMW8 372 aa5.32□□□□□ -1.56
UBR4-215ENST00000492606 WASF3Q9UPY6 502 aa5.32□□□□□ -1.56
UBR4-215ENST00000492606 KCNMB2Q9Y691 235 aa5.32□□□□□ -1.56
UBR4-215ENST00000492606 SIP14410 1827 aa5.32□□□□□ -1.56
UBR4-215ENST00000492606 ITPR2Q14571 2701 aa5.32□□□□□ -1.56
UBR4-215ENST00000492606 ATG2AQ2TAZ0 1938 aa5.31□□□□□ -1.56
UBR4-215ENST00000492606 A0A1W2PQ45 241 aaPredicted RBP5.31□□□□□ -1.56
UBR4-215ENST00000492606 A0A1W2PQY0 241 aa5.31□□□□□ -1.56
UBR4-215ENST00000492606 PRPF40AO75400 957 aaKnown RBP5.31□□□□□ -1.56
UBR4-215ENST00000492606 TOP3BO95985 862 aaKnown RBP5.31□□□□□ -1.56
UBR4-215ENST00000492606 LDHBP07195 334 aaKnown RBP5.31□□□□□ -1.56
UBR4-215ENST00000492606 BMP2P12643 396 aa5.31□□□□□ -1.56
UBR4-215ENST00000492606 CYBAP13498 195 aa5.31□□□□□ -1.56
UBR4-215ENST00000492606 RHOQP17081 205 aa5.31□□□□□ -1.56
UBR4-215ENST00000492606 MSX1P28360 303 aa5.31□□□□□ -1.56
UBR4-215ENST00000492606 CYP2C19P33261 490 aa5.31□□□□□ -1.56
UBR4-215ENST00000492606 MAPK8P45983 427 aa5.31□□□□□ -1.56
UBR4-215ENST00000492606 IDH3AP50213 366 aa5.31□□□□□ -1.56
UBR4-215ENST00000492606 DAB2P98082 770 aa5.31□□□□□ -1.56
UBR4-215ENST00000492606 SMAD4Q13485 552 aaKnown RBP5.31□□□□□ -1.56
UBR4-215ENST00000492606 TCEAL5Q5H9L2 206 aa5.31□□□□□ -1.56
UBR4-215ENST00000492606 TREML2Q5T2D2 321 aa5.31□□□□□ -1.56
UBR4-215ENST00000492606 XKR5Q6UX68 686 aa5.31□□□□□ -1.56
UBR4-215ENST00000492606 FASTKD5Q7L8L6 764 aaKnown RBP5.31□□□□□ -1.56
UBR4-215ENST00000492606 LYSMD3Q7Z3D4 306 aa5.31□□□□□ -1.56
UBR4-215ENST00000492606 RPAINQ86UA6 219 aa5.31□□□□□ -1.56
UBR4-215ENST00000492606 TXNRD3Q86VQ6 643 aa5.31□□□□□ -1.56
UBR4-215ENST00000492606 RHPN1Q8TCX5 695 aa5.31□□□□□ -1.56
UBR4-215ENST00000492606 SOCS4Q8WXH5 440 aa5.31□□□□□ -1.56
UBR4-215ENST00000492606 RIN2Q8WYP3 895 aaPredicted RBP5.31□□□□□ -1.56
UBR4-215ENST00000492606 DUSP9Q99956 384 aaKnown RBP5.31□□□□□ -1.56
UBR4-215ENST00000492606 SMOC2Q9H3U7 446 aa5.31□□□□□ -1.56
UBR4-215ENST00000492606 TDRD3Q9H7E2 651 aaKnown RBP5.31□□□□□ -1.56
UBR4-215ENST00000492606 GPC6Q9Y625 555 aaPredicted RBP5.31□□□□□ -1.56
UBR4-215ENST00000492606 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.31□□□□□ -1.56
UBR4-215ENST00000492606 CACNA1IQ9P0X4 2223 aa5.31□□□□□ -1.56
UBR4-215ENST00000492606 UTP20O75691 2785 aaKnown RBP5.3□□□□□ -1.56
UBR4-215ENST00000492606 A0A1B0GUL7 405 aa5.3□□□□□ -1.56
UBR4-215ENST00000492606 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.3□□□□□ -1.56
UBR4-215ENST00000492606 FIGNL2A6NMB9 653 aa5.3□□□□□ -1.56
UBR4-215ENST00000492606 TCF3P15923 654 aa5.3□□□□□ -1.56
UBR4-215ENST00000492606 RGS2P41220 211 aa5.3□□□□□ -1.56
UBR4-215ENST00000492606 USP5P45974 858 aa5.3□□□□□ -1.56
UBR4-215ENST00000492606 RPS8P62241 208 aaKnown RBP5.3□□□□□ -1.56
UBR4-215ENST00000492606 TNFAIP1Q13829 316 aa5.3□□□□□ -1.56
UBR4-215ENST00000492606 UBAP2LQ14157 1087 aaKnown RBP5.3□□□□□ -1.56
UBR4-215ENST00000492606 CTC1Q2NKJ3 1217 aa5.3□□□□□ -1.56
UBR4-215ENST00000492606 PARP10Q53GL7 1025 aa5.3□□□□□ -1.56
UBR4-215ENST00000492606 FAM47AQ5JRC9 791 aa5.3□□□□□ -1.56
UBR4-215ENST00000492606 MFSD14CQ5VZR4 134 aa5.3□□□□□ -1.56
UBR4-215ENST00000492606 MIGA2Q7L4E1 593 aa5.3□□□□□ -1.56
UBR4-215ENST00000492606 BTLAQ7Z6A9 289 aa5.3□□□□□ -1.56
UBR4-215ENST00000492606 NETO1Q8TDF5 533 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms