RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 ALDH8A1Q9H2A2 487 aaPredicted RBP31.3■■■□□ 2.6
SH3GL3-204ENST00000492099 B4GALT4O60513 344 aa31.29■■■□□ 2.6
SH3GL3-204ENST00000492099 ARHGAP1Q07960 439 aa31.29■■■□□ 2.6
SH3GL3-204ENST00000492099 PPIGQ13427 754 aaKnown RBP eCLIP31.29■■■□□ 2.6
SH3GL3-204ENST00000492099 APOA5Q6Q788 366 aa31.29■■■□□ 2.6
SH3GL3-204ENST00000492099 TMTC3Q6ZXV5 915 aa31.29■■■□□ 2.6
SH3GL3-204ENST00000492099 RAB11FIP4Q86YS3 637 aa31.29■■■□□ 2.6
SH3GL3-204ENST00000492099 CMTR1Q8N1G2 835 aaKnown RBP31.29■■■□□ 2.6
SH3GL3-204ENST00000492099 AFG1LQ8WV93 481 aa31.29■■■□□ 2.6
SH3GL3-204ENST00000492099 KCNB2Q92953 911 aa31.29■■■□□ 2.6
SH3GL3-204ENST00000492099 CUL5Q93034 780 aa31.29■■■□□ 2.6
SH3GL3-204ENST00000492099 TRPV6Q9H1D0 765 aa31.29■■■□□ 2.6
SH3GL3-204ENST00000492099 REC8O95072 547 aa31.28■■■□□ 2.6
SH3GL3-204ENST00000492099 SUPT20HL2P0C7V6 817 aa31.28■■■□□ 2.6
SH3GL3-204ENST00000492099 EPHB4P54760 987 aa31.28■■■□□ 2.6
SH3GL3-204ENST00000492099 EMID1Q96A84 441 aaPredicted RBP31.28■■■□□ 2.6
SH3GL3-204ENST00000492099 PPP1R12CQ9BZL4 782 aa31.28■■■□□ 2.6
SH3GL3-204ENST00000492099 HIPK3Q9H422 1215 aa31.28■■■□□ 2.6
SH3GL3-204ENST00000492099 RBM28Q9NW13 759 aaKnown RBP31.28■■■□□ 2.6
SH3GL3-204ENST00000492099 RGS20O76081 388 aa31.27■■■□□ 2.6
SH3GL3-204ENST00000492099 MMP3P08254 477 aa31.27■■■□□ 2.6
SH3GL3-204ENST00000492099 HSPA4P34932 840 aa31.27■■■□□ 2.6
SH3GL3-204ENST00000492099 LAMC2Q13753 1193 aa31.27■■■□□ 2.6
SH3GL3-204ENST00000492099 NBPF20Q3BBV1 942 aa31.27■■■□□ 2.6
SH3GL3-204ENST00000492099 ERICH6BQ5W0A0 696 aa31.27■■■□□ 2.6
SH3GL3-204ENST00000492099 NFRKBQ6P4R8 1299 aa31.27■■■□□ 2.6
SH3GL3-204ENST00000492099 IL31RAQ8NI17 732 aa31.27■■■□□ 2.6
SH3GL3-204ENST00000492099 SMARCC2Q8TAQ2 1214 aa31.27■■■□□ 2.6
SH3GL3-204ENST00000492099 TCEANC2Q96MN5 208 aa31.27■■■□□ 2.6
SH3GL3-204ENST00000492099 KIAA1217Q5T5P2 1943 aa31.27■■■□□ 2.6
SH3GL3-204ENST00000492099 PIK3CDO00329 1044 aa31.26■■■□□ 2.59
SH3GL3-204ENST00000492099 TGFB3P10600 412 aa31.26■■■□□ 2.59
SH3GL3-204ENST00000492099 CASTP20810 708 aaKnown RBP31.26■■■□□ 2.59
SH3GL3-204ENST00000492099 DHX37Q8IY37 1157 aaKnown RBP31.26■■■□□ 2.59
SH3GL3-204ENST00000492099 CCDC82Q8N4S0 544 aa31.26■■■□□ 2.59
SH3GL3-204ENST00000492099 RNPC3Q96LT9 517 aaKnown RBP31.26■■■□□ 2.59
SH3GL3-204ENST00000492099 FRMPD4Q14CM0 1322 aa31.25■■■□□ 2.59
SH3GL3-204ENST00000492099 ZBTB43O43298 467 aa31.25■■■□□ 2.59
SH3GL3-204ENST00000492099 STAM2O75886 525 aa31.25■■■□□ 2.59
SH3GL3-204ENST00000492099 PTPN11Q06124 597 aaPredicted RBP31.25■■■□□ 2.59
SH3GL3-204ENST00000492099 DGKDQ16760 1214 aa31.25■■■□□ 2.59
SH3GL3-204ENST00000492099 DEFB123Q8N688 67 aa31.25■■■□□ 2.59
SH3GL3-204ENST00000492099 CSF2RAP15509 400 aa31.24■■■□□ 2.59
SH3GL3-204ENST00000492099 CYP2C18P33260 490 aa31.24■■■□□ 2.59
SH3GL3-204ENST00000492099 PPTC7Q8NI37 304 aa31.24■■■□□ 2.59
SH3GL3-204ENST00000492099 PPP4R2Q9NY27 417 aa31.24■■■□□ 2.59
SH3GL3-204ENST00000492099 BRPF3Q9ULD4 1205 aa31.24■■■□□ 2.59
SH3GL3-204ENST00000492099 MEIS2O14770 477 aa31.23■■■□□ 2.59
SH3GL3-204ENST00000492099 FGD1P98174 961 aa31.23■■■□□ 2.59
SH3GL3-204ENST00000492099 RTN1Q16799 776 aa31.23■■■□□ 2.59
SH3GL3-204ENST00000492099 GNPTABQ3T906 1256 aa31.23■■■□□ 2.59
SH3GL3-204ENST00000492099 FAM47CQ5HY64 1035 aa31.23■■■□□ 2.59
SH3GL3-204ENST00000492099 USP17L6PQ6QN14 398 aa31.23■■■□□ 2.59
SH3GL3-204ENST00000492099 NOC4LQ9BVI4 516 aaKnown RBP31.23■■■□□ 2.59
SH3GL3-204ENST00000492099 PSTPIP2Q9H939 334 aa31.23■■■□□ 2.59
SH3GL3-204ENST00000492099 TRMT13Q9NUP7 481 aaKnown RBP31.23■■■□□ 2.59
SH3GL3-204ENST00000492099 SCN10AQ9Y5Y9 1956 aa31.23■■■□□ 2.59
SH3GL3-204ENST00000492099 RCAN1P53805 252 aa31.22■■■□□ 2.59
SH3GL3-204ENST00000492099 FAM109BQ6ICB4 259 aaPredicted RBP31.22■■■□□ 2.59
SH3GL3-204ENST00000492099 SNX14Q9Y5W7 946 aa31.22■■■□□ 2.59
SH3GL3-204ENST00000492099 KLF18A0A0U1RQI7 1052 aa31.21■■■□□ 2.59
SH3GL3-204ENST00000492099 EPB41L2O43491 1005 aaKnown RBP31.21■■■□□ 2.59
SH3GL3-204ENST00000492099 SMAD3P84022 425 aaKnown RBP31.21■■■□□ 2.59
SH3GL3-204ENST00000492099 CELF3Q5SZQ8 465 aaKnown RBP31.21■■■□□ 2.59
SH3GL3-204ENST00000492099 MYSM1Q5VVJ2 828 aa31.21■■■□□ 2.59
SH3GL3-204ENST00000492099 XRRA1Q6P2D8 792 aa31.21■■■□□ 2.59
SH3GL3-204ENST00000492099 JAKMIP1Q96N16 626 aaKnown RBP31.21■■■□□ 2.59
SH3GL3-204ENST00000492099 BUD13Q9BRD0 619 aaKnown RBP eCLIP31.21■■■□□ 2.59
SH3GL3-204ENST00000492099 hCG_1642624A0A1W2PR95 340 aa31.2■■■□□ 2.59
SH3GL3-204ENST00000492099 MRPS9P82933 396 aaKnown RBP31.2■■■□□ 2.59
SH3GL3-204ENST00000492099 PSRC1Q6PGN9 363 aaPredicted RBP31.2■■■□□ 2.59
SH3GL3-204ENST00000492099 BLOC1S2Q6QNY1 142 aa31.2■■■□□ 2.59
SH3GL3-204ENST00000492099 Q7L0L9 218 aa31.2■■■□□ 2.59
SH3GL3-204ENST00000492099 INPP4AQ96PE3 977 aaPredicted RBP31.2■■■□□ 2.59
SH3GL3-204ENST00000492099 GOLGA8AA7E2F4 631 aa31.19■■■□□ 2.58
SH3GL3-204ENST00000492099 GOLGA8BA8MQT2 603 aa31.19■■■□□ 2.58
SH3GL3-204ENST00000492099 GGPS1O95749 300 aa31.19■■■□□ 2.58
SH3GL3-204ENST00000492099 UBA1P22314 1058 aaKnown RBP31.19■■■□□ 2.58
SH3GL3-204ENST00000492099 TMEM240Q5SV17 173 aa31.19■■■□□ 2.58
SH3GL3-204ENST00000492099 PCNX4Q63HM2 1172 aa31.19■■■□□ 2.58
SH3GL3-204ENST00000492099 C16orf59Q7L2K0 433 aa31.19■■■□□ 2.58
SH3GL3-204ENST00000492099 HEATR3Q7Z4Q2 680 aa31.19■■■□□ 2.58
SH3GL3-204ENST00000492099 KAT2BQ92831 832 aa31.19■■■□□ 2.58
SH3GL3-204ENST00000492099 ZFP91Q96JP5 570 aaPredicted RBP31.19■■■□□ 2.58
SH3GL3-204ENST00000492099 KATNAL1Q9BW62 490 aa31.19■■■□□ 2.58
SH3GL3-204ENST00000492099 IL23AQ9NPF7 189 aa31.19■■■□□ 2.58
SH3GL3-204ENST00000492099 UMODL1Q5DID0 1318 aa31.19■■■□□ 2.58
SH3GL3-204ENST00000492099 PPFIA4O75335 1185 aa31.18■■■□□ 2.58
SH3GL3-204ENST00000492099 CYP2C9P11712 490 aa31.18■■■□□ 2.58
SH3GL3-204ENST00000492099 PSMA5P28066 241 aa31.18■■■□□ 2.58
SH3GL3-204ENST00000492099 ICAM3P32942 547 aa31.18■■■□□ 2.58
SH3GL3-204ENST00000492099 CCL23P55773 120 aa31.18■■■□□ 2.58
SH3GL3-204ENST00000492099 CHMP4BP1P59074 171 aa31.18■■■□□ 2.58
SH3GL3-204ENST00000492099 SP2Q02086 613 aa31.18■■■□□ 2.58
SH3GL3-204ENST00000492099 SESTD1Q86VW0 696 aa31.18■■■□□ 2.58
SH3GL3-204ENST00000492099 SPATA33Q96N06 139 aa31.18■■■□□ 2.58
SH3GL3-204ENST00000492099 MLXIPQ9HAP2 919 aa31.18■■■□□ 2.58
SH3GL3-204ENST00000492099 CNTNAP5Q8WYK1 1306 aa31.18■■■□□ 2.58
SH3GL3-204ENST00000492099 HOXD8P13378 290 aaPredicted RBP31.17■■■□□ 2.58
SH3GL3-204ENST00000492099 CPA1P15085 419 aa31.17■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms