RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 ALDH8A1Q9H2A2 487 aaPredicted RBP17.34■□□□□ 0.37
TOM1-215ENST00000491987 HIPK3Q9H422 1215 aa17.34■□□□□ 0.37
TOM1-215ENST00000491987 SEC63Q9UGP8 760 aaKnown RBP17.34■□□□□ 0.37
TOM1-215ENST00000491987 DDX41Q9UJV9 622 aaKnown RBP17.34■□□□□ 0.37
TOM1-215ENST00000491987 KIAA1217Q5T5P2 1943 aa17.33■□□□□ 0.37
TOM1-215ENST00000491987 UMODL1Q5DID0 1318 aa17.33■□□□□ 0.36
TOM1-215ENST00000491987 KPNA6O60684 536 aa17.33■□□□□ 0.36
TOM1-215ENST00000491987 MMP3P08254 477 aa17.33■□□□□ 0.36
TOM1-215ENST00000491987 SMARCA1P28370 1054 aa17.33■□□□□ 0.36
TOM1-215ENST00000491987 CHMP4BP1P59074 171 aa17.33■□□□□ 0.36
TOM1-215ENST00000491987 NBPF20Q3BBV1 942 aa17.33■□□□□ 0.36
TOM1-215ENST00000491987 ADCK5Q3MIX3 580 aa17.33■□□□□ 0.36
TOM1-215ENST00000491987 MICU3Q86XE3 530 aa17.33■□□□□ 0.36
TOM1-215ENST00000491987 ZFP91Q96JP5 570 aaPredicted RBP17.33■□□□□ 0.36
TOM1-215ENST00000491987 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.33■□□□□ 0.361e-7■□□□□ 10
TOM1-215ENST00000491987 TRMT13Q9NUP7 481 aaKnown RBP17.33■□□□□ 0.36
TOM1-215ENST00000491987 BAZ2BQ9UIF8 2168 aaKnown RBP17.33■□□□□ 0.36
TOM1-215ENST00000491987 RGS20O76081 388 aa17.32■□□□□ 0.36
TOM1-215ENST00000491987 CCND2P30279 289 aa17.32■□□□□ 0.36
TOM1-215ENST00000491987 C16orf59Q7L2K0 433 aa17.32■□□□□ 0.36
TOM1-215ENST00000491987 VSIG10LQ86VR7 867 aa17.32■□□□□ 0.36
TOM1-215ENST00000491987 SGMS1Q86VZ5 419 aa17.32■□□□□ 0.36
TOM1-215ENST00000491987 CCDC82Q8N4S0 544 aa17.32■□□□□ 0.36
TOM1-215ENST00000491987 NOC4LQ9BVI4 516 aaKnown RBP17.32■□□□□ 0.36
TOM1-215ENST00000491987 hCG_1642624A0A1W2PR95 340 aa17.31■□□□□ 0.36
TOM1-215ENST00000491987 SORBS3O60504 671 aa17.31■□□□□ 0.36
TOM1-215ENST00000491987 ACRP10323 421 aa17.31■□□□□ 0.36
TOM1-215ENST00000491987 CYP2C9P11712 490 aa17.31■□□□□ 0.36
TOM1-215ENST00000491987 CCL23P55773 120 aa17.31■□□□□ 0.36
TOM1-215ENST00000491987 TSGA10IPQ3SY00 556 aa17.31■□□□□ 0.36
TOM1-215ENST00000491987 TMEM240Q5SV17 173 aa17.31■□□□□ 0.36
TOM1-215ENST00000491987 APOA5Q6Q788 366 aa17.31■□□□□ 0.36
TOM1-215ENST00000491987 SYNE3Q6ZMZ3 975 aa17.31■□□□□ 0.36
TOM1-215ENST00000491987 DHX32Q7L7V1 743 aaKnown RBP17.31■□□□□ 0.36
TOM1-215ENST00000491987 FANCBQ8NB91 859 aa17.31■□□□□ 0.36
TOM1-215ENST00000491987 FAM161BQ96MY7 647 aa17.31■□□□□ 0.36
TOM1-215ENST00000491987 MTMR10Q9NXD2 777 aa17.31■□□□□ 0.36
TOM1-215ENST00000491987 FRMPD4Q14CM0 1322 aa17.3■□□□□ 0.36
TOM1-215ENST00000491987 SCN10AQ9Y5Y9 1956 aa17.3■□□□□ 0.36
TOM1-215ENST00000491987 SUPT20HL2P0C7V6 817 aa17.3■□□□□ 0.36
TOM1-215ENST00000491987 SMAD3P84022 425 aaKnown RBP17.3■□□□□ 0.36
TOM1-215ENST00000491987 EXOSC10Q01780 885 aaKnown RBP17.3■□□□□ 0.36
TOM1-215ENST00000491987 KRT32Q14532 448 aa17.3■□□□□ 0.36
TOM1-215ENST00000491987 PSRC1Q6PGN9 363 aaPredicted RBP17.3■□□□□ 0.36
TOM1-215ENST00000491987 USP17L6PQ6QN14 398 aa17.3■□□□□ 0.36
TOM1-215ENST00000491987 TMTC3Q6ZXV5 915 aa17.3■□□□□ 0.36
TOM1-215ENST00000491987 DHX37Q8IY37 1157 aaKnown RBP17.3■□□□□ 0.36
TOM1-215ENST00000491987 SMARCC2Q8TAQ2 1214 aa17.3■□□□□ 0.36
TOM1-215ENST00000491987 CUL5Q93034 780 aa17.3■□□□□ 0.36
TOM1-215ENST00000491987 EMID1Q96A84 441 aaPredicted RBP17.3■□□□□ 0.36
TOM1-215ENST00000491987 WNT8AQ9H1J5 351 aa17.3■□□□□ 0.36
TOM1-215ENST00000491987 IL23AQ9NPF7 189 aa17.3■□□□□ 0.36
TOM1-215ENST00000491987 BRPF3Q9ULD4 1205 aa17.3■□□□□ 0.36
TOM1-215ENST00000491987 GGPS1O95749 300 aa17.29■□□□□ 0.36
TOM1-215ENST00000491987 CASTP20810 708 aaKnown RBP17.29■□□□□ 0.36
TOM1-215ENST00000491987 LAMC2Q13753 1193 aa17.29■□□□□ 0.36
TOM1-215ENST00000491987 ZNF697Q5TEC3 545 aa17.29■□□□□ 0.36
TOM1-215ENST00000491987 FAM109BQ6ICB4 259 aaPredicted RBP17.29■□□□□ 0.36
TOM1-215ENST00000491987 NFRKBQ6P4R8 1299 aa17.29■□□□□ 0.36
TOM1-215ENST00000491987 KCNV1Q6PIU1 500 aa17.29■□□□□ 0.36
TOM1-215ENST00000491987 ZNF365Q70YC5 407 aa17.29■□□□□ 0.36
TOM1-215ENST00000491987 GPKOWQ92917 476 aaPredicted RBP eCLIP17.29■□□□□ 0.36
TOM1-215ENST00000491987 MEIS2O14770 477 aa17.28■□□□□ 0.36
TOM1-215ENST00000491987 ZNF286BP0CG31 522 aa17.28■□□□□ 0.36
TOM1-215ENST00000491987 CPA1P15085 419 aa17.28■□□□□ 0.36
TOM1-215ENST00000491987 UBA1P22314 1058 aaKnown RBP17.28■□□□□ 0.36
TOM1-215ENST00000491987 MRPS9P82933 396 aaKnown RBP17.28■□□□□ 0.36
TOM1-215ENST00000491987 SP2Q02086 613 aa17.28■□□□□ 0.36
TOM1-215ENST00000491987 PTPN11Q06124 597 aaPredicted RBP17.28■□□□□ 0.36
TOM1-215ENST00000491987 DGKDQ16760 1214 aa17.28■□□□□ 0.36
TOM1-215ENST00000491987 GNPTABQ3T906 1256 aa17.28■□□□□ 0.36
TOM1-215ENST00000491987 PPTC7Q8NI37 304 aa17.28■□□□□ 0.36
TOM1-215ENST00000491987 KAT2BQ92831 832 aa17.28■□□□□ 0.36
TOM1-215ENST00000491987 SCLYQ96I15 445 aa17.28■□□□□ 0.36
TOM1-215ENST00000491987 CNTNAP5Q8WYK1 1306 aa17.27■□□□□ 0.36
TOM1-215ENST00000491987 KLF18A0A0U1RQI7 1052 aa17.27■□□□□ 0.36
TOM1-215ENST00000491987 PIK3CDO00329 1044 aa17.27■□□□□ 0.36
TOM1-215ENST00000491987 ZBTB43O43298 467 aa17.27■□□□□ 0.36
TOM1-215ENST00000491987 RTN1Q16799 776 aa17.27■□□□□ 0.36
TOM1-215ENST00000491987 CELF3Q5SZQ8 465 aaKnown RBP17.27■□□□□ 0.36
TOM1-215ENST00000491987 MYSM1Q5VVJ2 828 aa17.27■□□□□ 0.36
TOM1-215ENST00000491987 HEATR3Q7Z4Q2 680 aa17.27■□□□□ 0.36
TOM1-215ENST00000491987 SPATA33Q96N06 139 aa17.27■□□□□ 0.36
TOM1-215ENST00000491987 RBM28Q9NW13 759 aaKnown RBP17.27■□□□□ 0.36
TOM1-215ENST00000491987 RTEL1Q9NZ71 1219 aa17.27■□□□□ 0.36
TOM1-215ENST00000491987 NAP1L2Q9ULW6 460 aaPredicted RBP17.27■□□□□ 0.36
TOM1-215ENST00000491987 NOD1Q9Y239 953 aa17.27■□□□□ 0.36
TOM1-215ENST00000491987 SNX14Q9Y5W7 946 aa17.27■□□□□ 0.36
TOM1-215ENST00000491987 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.26■□□□□ 0.35
TOM1-215ENST00000491987 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.26■□□□□ 0.35
TOM1-215ENST00000491987 GOLGA8AA7E2F4 631 aa17.26■□□□□ 0.35
TOM1-215ENST00000491987 GOLGA8BA8MQT2 603 aa17.26■□□□□ 0.35
TOM1-215ENST00000491987 STAM2O75886 525 aa17.26■□□□□ 0.35
TOM1-215ENST00000491987 HMGB1P09429 215 aaKnown RBP17.26■□□□□ 0.35
TOM1-215ENST00000491987 TGFB3P10600 412 aa17.26■□□□□ 0.35
TOM1-215ENST00000491987 HSPA4P34932 840 aa17.26■□□□□ 0.35
TOM1-215ENST00000491987 PSEN2P49810 448 aa17.26■□□□□ 0.35
TOM1-215ENST00000491987 FGD1P98174 961 aa17.26■□□□□ 0.35
TOM1-215ENST00000491987 PTGISQ16647 500 aa17.26■□□□□ 0.35
TOM1-215ENST00000491987 UBE2SQ16763 222 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms