RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.09□□□□□ -1.27
CCDC6-202ENST00000491922 KCNMB3Q9NPA1 279 aa7.09□□□□□ -1.27
CCDC6-202ENST00000491922 CNOT8Q9UFF9 292 aaKnown RBP7.09□□□□□ -1.27
CCDC6-202ENST00000491922 DENND2AQ9ULE3 1009 aa7.09□□□□□ -1.27
CCDC6-202ENST00000491922 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.09□□□□□ -1.27
CCDC6-202ENST00000491922 GDAQ9Y2T3 454 aa7.09□□□□□ -1.27
CCDC6-202ENST00000491922 PCDHGC5Q9Y5F6 944 aa7.09□□□□□ -1.27
CCDC6-202ENST00000491922 RGPD2P0DJD1 1756 aa7.09□□□□□ -1.28
CCDC6-202ENST00000491922 TRIM49BA6NDI0 452 aa7.08□□□□□ -1.28
CCDC6-202ENST00000491922 PSMA7O14818 248 aa7.08□□□□□ -1.28
CCDC6-202ENST00000491922 AKR1B10O60218 316 aa7.08□□□□□ -1.28
CCDC6-202ENST00000491922 CSB-PGBD3P0DP91 1061 aa7.08□□□□□ -1.28
CCDC6-202ENST00000491922 ATP4AP20648 1035 aa7.08□□□□□ -1.28
CCDC6-202ENST00000491922 ARID4AP29374 1257 aaPredicted RBP7.08□□□□□ -1.28
CCDC6-202ENST00000491922 KIF5BP33176 963 aa7.08□□□□□ -1.28
CCDC6-202ENST00000491922 KRT2P35908 639 aa7.08□□□□□ -1.28
CCDC6-202ENST00000491922 MAGEA1P43355 309 aa7.08□□□□□ -1.28
CCDC6-202ENST00000491922 CEBPAP49715 358 aaPredicted RBP7.08□□□□□ -1.28
CCDC6-202ENST00000491922 RCAN1P53805 252 aa7.08□□□□□ -1.28
CCDC6-202ENST00000491922 HLTFQ14527 1009 aaKnown RBP eCLIP7.08□□□□□ -1.28
CCDC6-202ENST00000491922 UAP1Q16222 522 aaPredicted RBP7.08□□□□□ -1.28
CCDC6-202ENST00000491922 TYW1BQ6NUM6 668 aa7.08□□□□□ -1.28
CCDC6-202ENST00000491922 RPUSD2Q8IZ73 545 aaKnown RBP7.08□□□□□ -1.28
CCDC6-202ENST00000491922 CRACR2BQ8N4Y2 399 aaPredicted RBP7.08□□□□□ -1.28
CCDC6-202ENST00000491922 NUP133Q8WUM0 1156 aa7.08□□□□□ -1.28
CCDC6-202ENST00000491922 ZFAND2BQ8WV99 257 aa7.08□□□□□ -1.28
CCDC6-202ENST00000491922 PAIP2Q9BPZ3 127 aaKnown RBP7.08□□□□□ -1.28
CCDC6-202ENST00000491922 PAPOLBQ9NRJ5 636 aaKnown RBP7.08□□□□□ -1.28
CCDC6-202ENST00000491922 PANK4Q9NVE7 773 aa7.08□□□□□ -1.28
CCDC6-202ENST00000491922 CWC25Q9NXE8 425 aaPredicted RBP7.08□□□□□ -1.28
CCDC6-202ENST00000491922 ZNF219Q9P2Y4 722 aaPredicted RBP7.08□□□□□ -1.28
CCDC6-202ENST00000491922 RGS17Q9UGC6 210 aaPredicted RBP7.08□□□□□ -1.28
CCDC6-202ENST00000491922 NOVA2Q9UNW9 492 aaKnown RBP7.08□□□□□ -1.28
CCDC6-202ENST00000491922 ZBTB12Q9Y330 459 aaPredicted RBP7.08□□□□□ -1.28
CCDC6-202ENST00000491922 AFF2P51816 1311 aa7.08□□□□□ -1.28
CCDC6-202ENST00000491922 MYH7BA7E2Y1 1941 aa7.08□□□□□ -1.28
CCDC6-202ENST00000491922 RAD51CO43502 376 aa7.08□□□□□ -1.28
CCDC6-202ENST00000491922 CAND2O75155 1236 aa7.08□□□□□ -1.28
CCDC6-202ENST00000491922 EIF4A3P38919 411 aaKnown RBP7.08□□□□□ -1.28
CCDC6-202ENST00000491922 ZNF131P52739 623 aa7.08□□□□□ -1.28
CCDC6-202ENST00000491922 MAGOHP61326 146 aaKnown RBP7.08□□□□□ -1.28
CCDC6-202ENST00000491922 FOXO4P98177 505 aa7.08□□□□□ -1.28
CCDC6-202ENST00000491922 TRPM8Q7Z2W7 1104 aa7.08□□□□□ -1.28
CCDC6-202ENST00000491922 PIGWQ7Z7B1 504 aa7.08□□□□□ -1.28
CCDC6-202ENST00000491922 NKX2-3Q8TAU0 364 aa7.08□□□□□ -1.28
CCDC6-202ENST00000491922 MAGOHBQ96A72 148 aaKnown RBP7.08□□□□□ -1.28
CCDC6-202ENST00000491922 MTRQ99707 1265 aa7.08□□□□□ -1.28
CCDC6-202ENST00000491922 OSBPL1AQ9BXW6 950 aa7.08□□□□□ -1.28
CCDC6-202ENST00000491922 SAMD15Q9P1V8 674 aa7.08□□□□□ -1.28
CCDC6-202ENST00000491922 ARHGAP20Q9P2F6 1191 aa7.08□□□□□ -1.28
CCDC6-202ENST00000491922 MAPK8IP1Q9UQF2 711 aa7.08□□□□□ -1.28
CCDC6-202ENST00000491922 ADAMTS13Q76LX8 1427 aa7.08□□□□□ -1.28
CCDC6-202ENST00000491922 PKD1L3Q7Z443 1732 aa7.07□□□□□ -1.28
CCDC6-202ENST00000491922 TIAM2Q8IVF5 1701 aa7.07□□□□□ -1.28
CCDC6-202ENST00000491922 CES2O00748 559 aa7.07□□□□□ -1.28
CCDC6-202ENST00000491922 BACH1O14867 736 aa7.07□□□□□ -1.28
CCDC6-202ENST00000491922 CTNND1O60716 968 aaKnown RBP7.07□□□□□ -1.28
CCDC6-202ENST00000491922 PLEKP08567 350 aaPredicted RBP7.07□□□□□ -1.28
CCDC6-202ENST00000491922 ATP2A2P16615 1042 aaKnown RBP7.07□□□□□ -1.28
CCDC6-202ENST00000491922 KLK7P49862 253 aa7.07□□□□□ -1.28
CCDC6-202ENST00000491922 EIF3BP55884 814 aaKnown RBP7.07□□□□□ -1.28
CCDC6-202ENST00000491922 ATP2C1P98194 919 aaPredicted RBP7.07□□□□□ -1.28
CCDC6-202ENST00000491922 SNX1Q13596 522 aa7.07□□□□□ -1.28
CCDC6-202ENST00000491922 ANKRD20A2Q5SQ80 823 aa7.07□□□□□ -1.28
CCDC6-202ENST00000491922 ANKRD20A1Q5TYW2 823 aa7.07□□□□□ -1.28
CCDC6-202ENST00000491922 ANKRD20A3Q5VUR7 823 aa7.07□□□□□ -1.28
CCDC6-202ENST00000491922 GIGYF2Q6Y7W6 1299 aaKnown RBP7.07□□□□□ -1.28
CCDC6-202ENST00000491922 C2CD5Q86YS7 1000 aa7.07□□□□□ -1.28
CCDC6-202ENST00000491922 ZSCAN29Q8IWY8 852 aaPredicted RBP7.07□□□□□ -1.28
CCDC6-202ENST00000491922 ZNF513Q8N8E2 541 aaPredicted RBP7.07□□□□□ -1.28
CCDC6-202ENST00000491922 OR2W6PQ8NHA6 318 aa7.07□□□□□ -1.28
CCDC6-202ENST00000491922 TLCD1Q96CP7 247 aa7.07□□□□□ -1.28
CCDC6-202ENST00000491922 DHTKD1Q96HY7 919 aaPredicted RBP7.07□□□□□ -1.28
CCDC6-202ENST00000491922 ZNF317Q96PQ6 595 aaPredicted RBP7.07□□□□□ -1.28
CCDC6-202ENST00000491922 NSRP1Q9H0G5 558 aaKnown RBP7.07□□□□□ -1.28
CCDC6-202ENST00000491922 CNNM2Q9H8M5 875 aa7.07□□□□□ -1.28
CCDC6-202ENST00000491922 LUC7LQ9NQ29 371 aaKnown RBP7.07□□□□□ -1.28
CCDC6-202ENST00000491922 PHRF1Q9P1Y6 1649 aaKnown RBP7.07□□□□□ -1.28
CCDC6-202ENST00000491922 BICDL2A1A5D9 508 aa7.07□□□□□ -1.28
CCDC6-202ENST00000491922 LRRD1A4D1F6 860 aa7.07□□□□□ -1.28
CCDC6-202ENST00000491922 FLOT1O75955 427 aa7.07□□□□□ -1.28
CCDC6-202ENST00000491922 WFS1O76024 890 aa7.07□□□□□ -1.28
CCDC6-202ENST00000491922 MYL1P05976 194 aa7.07□□□□□ -1.28
CCDC6-202ENST00000491922 GNAT1P11488 350 aa7.07□□□□□ -1.28
CCDC6-202ENST00000491922 ECHS1P30084 290 aa7.07□□□□□ -1.28
CCDC6-202ENST00000491922 MTIF2P46199 727 aaKnown RBP7.07□□□□□ -1.28
CCDC6-202ENST00000491922 CTCFP49711 727 aaPredicted RBP7.07□□□□□ -1.28
CCDC6-202ENST00000491922 ERVK-9P63128 1117 aa7.07□□□□□ -1.28
CCDC6-202ENST00000491922 LMNB2Q03252 620 aa7.07□□□□□ -1.28
CCDC6-202ENST00000491922 PSMD2Q13200 908 aa7.07□□□□□ -1.28
CCDC6-202ENST00000491922 KRT71Q3SY84 523 aa7.07□□□□□ -1.28
CCDC6-202ENST00000491922 SPDYCQ5MJ68 293 aa7.07□□□□□ -1.28
CCDC6-202ENST00000491922 TTC38Q5R3I4 469 aa7.07□□□□□ -1.28
CCDC6-202ENST00000491922 TTI2Q6NXR4 508 aa7.07□□□□□ -1.28
CCDC6-202ENST00000491922 MTHFD1LQ6UB35 978 aa7.07□□□□□ -1.28
CCDC6-202ENST00000491922 GALNT15Q8N3T1 639 aa7.07□□□□□ -1.28
CCDC6-202ENST00000491922 CSGALNACT2Q8N6G5 542 aa7.07□□□□□ -1.28
CCDC6-202ENST00000491922 GBP7Q8N8V2 638 aaPredicted RBP7.07□□□□□ -1.28
CCDC6-202ENST00000491922 USP38Q8NB14 1042 aa7.07□□□□□ -1.28
CCDC6-202ENST00000491922 UBLCP1Q8WVY7 318 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms