RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 MTMR8Q96EF0 704 aa17.37■□□□□ 0.37
CDC42SE1-205ENST00000491825 ZNF274Q96GC6 653 aaPredicted RBP17.37■□□□□ 0.37
CDC42SE1-205ENST00000491825 SPZ1Q9BXG8 430 aa17.37■□□□□ 0.37
CDC42SE1-205ENST00000491825 SEZ6LQ9BYH1 1024 aa17.37■□□□□ 0.37
CDC42SE1-205ENST00000491825 CPVLQ9H3G5 476 aa17.37■□□□□ 0.37
CDC42SE1-205ENST00000491825 RIOX1Q9H6W3 641 aa17.37■□□□□ 0.37
CDC42SE1-205ENST00000491825 UMODL1Q5DID0 1318 aa17.37■□□□□ 0.37
CDC42SE1-205ENST00000491825 ZEB2O60315 1214 aa17.36■□□□□ 0.37
CDC42SE1-205ENST00000491825 B4GALT4O60513 344 aa17.36■□□□□ 0.37
CDC42SE1-205ENST00000491825 RXRAP19793 462 aa17.36■□□□□ 0.37
CDC42SE1-205ENST00000491825 CYP2C18P33260 490 aa17.36■□□□□ 0.37
CDC42SE1-205ENST00000491825 METAP2P50579 478 aaKnown RBP eCLIP17.36■□□□□ 0.37
CDC42SE1-205ENST00000491825 AK2P54819 239 aa17.36■□□□□ 0.37
CDC42SE1-205ENST00000491825 PSMC6P62333 389 aa17.36■□□□□ 0.37
CDC42SE1-205ENST00000491825 RTN1Q16799 776 aa17.36■□□□□ 0.37
CDC42SE1-205ENST00000491825 PSRC1Q6PGN9 363 aaPredicted RBP17.36■□□□□ 0.37
CDC42SE1-205ENST00000491825 TMTC3Q6ZXV5 915 aa17.36■□□□□ 0.37
CDC42SE1-205ENST00000491825 MAFAQ8NHW3 353 aaPredicted RBP17.36■□□□□ 0.37
CDC42SE1-205ENST00000491825 NOC4LQ9BVI4 516 aaKnown RBP17.36■□□□□ 0.37
CDC42SE1-205ENST00000491825 WDR11Q9BZH6 1224 aa17.36■□□□□ 0.37
CDC42SE1-205ENST00000491825 UBA5Q9GZZ9 404 aa17.36■□□□□ 0.37
CDC42SE1-205ENST00000491825 HIPK3Q9H422 1215 aa17.36■□□□□ 0.37
CDC42SE1-205ENST00000491825 JMJD4Q9H9V9 463 aa17.36■□□□□ 0.37
CDC42SE1-205ENST00000491825 MYH6P13533 1939 aa17.36■□□□□ 0.37
CDC42SE1-205ENST00000491825 CCDC196A0A1B0GTZ2 297 aa17.35■□□□□ 0.37
CDC42SE1-205ENST00000491825 GOLGA8AA7E2F4 631 aa17.35■□□□□ 0.37
CDC42SE1-205ENST00000491825 CYTH3O43739 400 aa17.35■□□□□ 0.37
CDC42SE1-205ENST00000491825 ACRP10323 421 aa17.35■□□□□ 0.37
CDC42SE1-205ENST00000491825 PDIA3P30101 505 aaKnown RBP17.35■□□□□ 0.37
CDC42SE1-205ENST00000491825 PURAQ00577 322 aaKnown RBP17.35■□□□□ 0.37
CDC42SE1-205ENST00000491825 GRIN2CQ14957 1233 aa17.35■□□□□ 0.37
CDC42SE1-205ENST00000491825 SLC35G1Q2M3R5 365 aa17.35■□□□□ 0.37
CDC42SE1-205ENST00000491825 ZNF365Q70YC5 407 aa17.35■□□□□ 0.37
CDC42SE1-205ENST00000491825 DNERQ8NFT8 737 aa17.35■□□□□ 0.37
CDC42SE1-205ENST00000491825 VWCEQ96DN2 955 aa17.35■□□□□ 0.37
CDC42SE1-205ENST00000491825 TRPV6Q9H1D0 765 aa17.35■□□□□ 0.37
CDC42SE1-205ENST00000491825 WNT8AQ9H1J5 351 aa17.35■□□□□ 0.37
CDC42SE1-205ENST00000491825 IL23AQ9NPF7 189 aa17.35■□□□□ 0.37
CDC42SE1-205ENST00000491825 GRXCR1A8MXD5 290 aa17.34■□□□□ 0.37
CDC42SE1-205ENST00000491825 PLEKHA8P1O95397 391 aa17.34■□□□□ 0.37
CDC42SE1-205ENST00000491825 CDC37Q16543 378 aaPredicted RBP17.34■□□□□ 0.37
CDC42SE1-205ENST00000491825 RGS22Q8NE09 1264 aa17.34■□□□□ 0.37
CDC42SE1-205ENST00000491825 HERVK_113Q902F9 699 aa17.34■□□□□ 0.37
CDC42SE1-205ENST00000491825 COL25A1Q9BXS0 654 aaPredicted RBP17.34■□□□□ 0.37
CDC42SE1-205ENST00000491825 PBX4Q9BYU1 374 aa17.34■□□□□ 0.37
CDC42SE1-205ENST00000491825 FAM217BQ9NTX9 383 aaPredicted RBP17.34■□□□□ 0.37
CDC42SE1-205ENST00000491825 CHD9Q3L8U1 2897 aa17.34■□□□□ 0.37
CDC42SE1-205ENST00000491825 CNTNAP5Q8WYK1 1306 aa17.33■□□□□ 0.36
CDC42SE1-205ENST00000491825 ZBTB5O15062 677 aa17.33■□□□□ 0.36
CDC42SE1-205ENST00000491825 DHX16O60231 1041 aaKnown RBP17.33■□□□□ 0.36
CDC42SE1-205ENST00000491825 FOSL2P15408 326 aa17.33■□□□□ 0.36
CDC42SE1-205ENST00000491825 PBX2P40425 430 aa17.33■□□□□ 0.36
CDC42SE1-205ENST00000491825 CPT1AP50416 773 aa17.33■□□□□ 0.36
CDC42SE1-205ENST00000491825 USH1GQ495M9 461 aa17.33■□□□□ 0.36
CDC42SE1-205ENST00000491825 RAB11FIP4Q86YS3 637 aa17.33■□□□□ 0.36
CDC42SE1-205ENST00000491825 SRBD1Q8N5C6 995 aaKnown RBP17.33■□□□□ 0.36
CDC42SE1-205ENST00000491825 TIFAQ96CG3 184 aa17.33■□□□□ 0.36
CDC42SE1-205ENST00000491825 MAF1Q9H063 256 aa17.33■□□□□ 0.36
CDC42SE1-205ENST00000491825 ZNF576Q9H609 170 aa17.33■□□□□ 0.36
CDC42SE1-205ENST00000491825 POLR3EQ9NVU0 708 aa17.33■□□□□ 0.36
CDC42SE1-205ENST00000491825 CXXC1Q9P0U4 656 aaPredicted RBP17.33■□□□□ 0.36
CDC42SE1-205ENST00000491825 TPCN1Q9ULQ1 816 aa17.33■□□□□ 0.36
CDC42SE1-205ENST00000491825 NKRFO15226 690 aaKnown RBP eCLIP17.32■□□□□ 0.36
CDC42SE1-205ENST00000491825 ARIH2O95376 493 aa17.32■□□□□ 0.36
CDC42SE1-205ENST00000491825 CDC27P30260 824 aa17.32■□□□□ 0.36
CDC42SE1-205ENST00000491825 PDE4DQ08499 809 aa17.32■□□□□ 0.36
CDC42SE1-205ENST00000491825 FUT2Q10981 343 aa17.32■□□□□ 0.36
CDC42SE1-205ENST00000491825 QRICH1Q2TAL8 776 aa17.32■□□□□ 0.36
CDC42SE1-205ENST00000491825 OR6J1Q8NGC5 347 aa17.32■□□□□ 0.36
CDC42SE1-205ENST00000491825 SCFD2Q8WU76 684 aa17.32■□□□□ 0.36
CDC42SE1-205ENST00000491825 TBC1D5Q92609 795 aa17.32■□□□□ 0.36
CDC42SE1-205ENST00000491825 COL20A1Q9P218 1284 aa17.32■□□□□ 0.36
CDC42SE1-205ENST00000491825 NAP1L2Q9ULW6 460 aaPredicted RBP17.32■□□□□ 0.36
CDC42SE1-205ENST00000491825 A6NJR5 290 aa17.31■□□□□ 0.36
CDC42SE1-205ENST00000491825 ST18O60284 1047 aa17.31■□□□□ 0.36
CDC42SE1-205ENST00000491825 CCL23P55773 120 aa17.31■□□□□ 0.36
CDC42SE1-205ENST00000491825 TRAF1Q13077 416 aa17.31■□□□□ 0.36
CDC42SE1-205ENST00000491825 SYTL5Q8TDW5 730 aaPredicted RBP17.31■□□□□ 0.36
CDC42SE1-205ENST00000491825 COPS5Q92905 334 aa17.31■□□□□ 0.36
CDC42SE1-205ENST00000491825 RRP36Q96EU6 259 aaKnown RBP17.31■□□□□ 0.36
CDC42SE1-205ENST00000491825 MTG1Q9BT17 334 aaPredicted RBP17.31■□□□□ 0.36
CDC42SE1-205ENST00000491825 TRMT13Q9NUP7 481 aaKnown RBP17.31■□□□□ 0.36
CDC42SE1-205ENST00000491825 MUC3AQ02505 3323 aa17.31■□□□□ 0.36
CDC42SE1-205ENST00000491825 ABCB11O95342 1321 aa17.3■□□□□ 0.36
CDC42SE1-205ENST00000491825 PNMA6FA0A0J9YX94 578 aa17.3■□□□□ 0.36
CDC42SE1-205ENST00000491825 PFKFB2O60825 505 aa17.3■□□□□ 0.36
CDC42SE1-205ENST00000491825 MYL3P08590 195 aa17.3■□□□□ 0.36
CDC42SE1-205ENST00000491825 NTRK3Q16288 839 aa17.3■□□□□ 0.36
CDC42SE1-205ENST00000491825 CCDC62Q6P9F0 684 aa17.3■□□□□ 0.36
CDC42SE1-205ENST00000491825 FBXO11Q86XK2 927 aa17.3■□□□□ 0.36
CDC42SE1-205ENST00000491825 PIGSQ96S52 555 aa17.3■□□□□ 0.36
CDC42SE1-205ENST00000491825 MPHOSPH6Q99547 160 aaKnown RBP17.3■□□□□ 0.36
CDC42SE1-205ENST00000491825 AMNQ9BXJ7 453 aa17.3■□□□□ 0.36
CDC42SE1-205ENST00000491825 BAZ2BQ9UIF8 2168 aaKnown RBP17.3■□□□□ 0.36
CDC42SE1-205ENST00000491825 PPP1R11O60927 126 aaPredicted RBP17.29■□□□□ 0.36
CDC42SE1-205ENST00000491825 FGBP02675 491 aa17.29■□□□□ 0.36
CDC42SE1-205ENST00000491825 CYP2C9P11712 490 aa17.29■□□□□ 0.36
CDC42SE1-205ENST00000491825 IFNAR1P17181 557 aa17.29■□□□□ 0.36
CDC42SE1-205ENST00000491825 ADD1P35611 737 aaKnown RBP17.29■□□□□ 0.36
CDC42SE1-205ENST00000491825 HOMER1Q86YM7 354 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms