RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 CCDC144BQ3MJ40 725 aa10.75□□□□□ -0.69
BRCA1-219ENST00000491747 TAPT1Q6NXT6 567 aa10.75□□□□□ -0.69
BRCA1-219ENST00000491747 RBM28Q9NW13 759 aaKnown RBP10.75□□□□□ -0.69
BRCA1-219ENST00000491747 MSCO60682 206 aa10.75□□□□□ -0.69
BRCA1-219ENST00000491747 PDIA3P30101 505 aaKnown RBP10.75□□□□□ -0.69
BRCA1-219ENST00000491747 METAP2P50579 478 aaKnown RBP eCLIP10.75□□□□□ -0.69
BRCA1-219ENST00000491747 GJC2Q5T442 439 aaPredicted RBP10.75□□□□□ -0.69
BRCA1-219ENST00000491747 MCF2L2Q86YR7 1114 aa10.75□□□□□ -0.69
BRCA1-219ENST00000491747 FBXO16Q8IX29 292 aaPredicted RBP10.75□□□□□ -0.69
BRCA1-219ENST00000491747 ANKLE1Q8NAG6 615 aa10.75□□□□□ -0.69
BRCA1-219ENST00000491747 PDRG1Q9NUG6 133 aa10.75□□□□□ -0.69
BRCA1-219ENST00000491747 NID2Q14112 1375 aa10.75□□□□□ -0.69
BRCA1-219ENST00000491747 FIBPO43427 364 aa10.74□□□□□ -0.69
BRCA1-219ENST00000491747 TPM3P06753 285 aa10.74□□□□□ -0.69
BRCA1-219ENST00000491747 PDIA4P13667 645 aaKnown RBP10.74□□□□□ -0.69
BRCA1-219ENST00000491747 AKR1A1P14550 325 aa10.74□□□□□ -0.69
BRCA1-219ENST00000491747 EDNRBP24530 442 aa10.74□□□□□ -0.69
BRCA1-219ENST00000491747 ADCYAP1R1P41586 468 aa10.74□□□□□ -0.69
BRCA1-219ENST00000491747 RCAN1P53805 252 aa10.74□□□□□ -0.69
BRCA1-219ENST00000491747 DNERQ8NFT8 737 aa10.74□□□□□ -0.69
BRCA1-219ENST00000491747 NCOA5Q9HCD5 579 aaKnown RBP10.74□□□□□ -0.69
BRCA1-219ENST00000491747 ADD3Q9UEY8 706 aaKnown RBP10.74□□□□□ -0.69
BRCA1-219ENST00000491747 FAM184BQ9ULE4 1060 aa10.74□□□□□ -0.69
BRCA1-219ENST00000491747 PPFIA3O75145 1194 aa10.74□□□□□ -0.69
BRCA1-219ENST00000491747 PGK1P00558 417 aa10.74□□□□□ -0.69
BRCA1-219ENST00000491747 COL6A1P12109 1028 aa10.74□□□□□ -0.69
BRCA1-219ENST00000491747 GTF2F1P35269 517 aaKnown RBP eCLIP10.74□□□□□ -0.694e-8■■■□□ 16.5
BRCA1-219ENST00000491747 CCT2P78371 535 aaKnown RBP10.74□□□□□ -0.69
BRCA1-219ENST00000491747 GPKOWQ92917 476 aaPredicted RBP eCLIP10.74□□□□□ -0.69
BRCA1-219ENST00000491747 MAF1Q9H063 256 aa10.74□□□□□ -0.69
BRCA1-219ENST00000491747 SH2B1Q9NRF2 756 aaPredicted RBP10.74□□□□□ -0.69
BRCA1-219ENST00000491747 SEC63Q9UGP8 760 aaKnown RBP10.74□□□□□ -0.69
BRCA1-219ENST00000491747 V9GY48 417 aaPredicted RBP10.74□□□□□ -0.69
BRCA1-219ENST00000491747 DNAH12Q6ZR08 3092 aa10.73□□□□□ -0.69
BRCA1-219ENST00000491747 CAPN2P17655 700 aa10.73□□□□□ -0.69
BRCA1-219ENST00000491747 LRRC41Q15345 812 aa10.73□□□□□ -0.69
BRCA1-219ENST00000491747 NTRK3Q16288 839 aa10.73□□□□□ -0.69
BRCA1-219ENST00000491747 TYW1BQ6NUM6 668 aa10.73□□□□□ -0.69
BRCA1-219ENST00000491747 ZSCAN31Q96LW9 406 aaPredicted RBP10.73□□□□□ -0.69
BRCA1-219ENST00000491747 RMDN3Q96TC7 470 aa10.73□□□□□ -0.69
BRCA1-219ENST00000491747 TTC12Q9H892 705 aaPredicted RBP10.73□□□□□ -0.69
BRCA1-219ENST00000491747 XPNPEP3Q9NQH7 507 aa10.73□□□□□ -0.69
BRCA1-219ENST00000491747 SPTLC3Q9NUV7 552 aa10.73□□□□□ -0.69
BRCA1-219ENST00000491747 MYADML2A6NDP7 307 aa10.73□□□□□ -0.69
BRCA1-219ENST00000491747 GOLGA6L6A8MZA4 724 aa10.73□□□□□ -0.69
BRCA1-219ENST00000491747 MEIS2O14770 477 aa10.73□□□□□ -0.69
BRCA1-219ENST00000491747 ADAMTS4O75173 837 aa10.73□□□□□ -0.69
BRCA1-219ENST00000491747 RARBP10826 455 aa10.73□□□□□ -0.69
BRCA1-219ENST00000491747 SMPD1P17405 629 aa10.73□□□□□ -0.69
BRCA1-219ENST00000491747 EIF2AK2P19525 551 aaKnown RBP10.73□□□□□ -0.69
BRCA1-219ENST00000491747 WWC2Q6AWC2 1192 aa10.73□□□□□ -0.69
BRCA1-219ENST00000491747 USP17L6PQ6QN14 398 aa10.73□□□□□ -0.69
BRCA1-219ENST00000491747 NECAB2Q7Z6G3 386 aa10.73□□□□□ -0.69
BRCA1-219ENST00000491747 SMAP1Q8IYB5 467 aaPredicted RBP10.73□□□□□ -0.69
BRCA1-219ENST00000491747 ZNF830Q96NB3 372 aaPredicted RBP10.73□□□□□ -0.69
BRCA1-219ENST00000491747 CCDC94Q9BW85 323 aaPredicted RBP10.73□□□□□ -0.69
BRCA1-219ENST00000491747 PXMP2Q9NR77 195 aa10.73□□□□□ -0.69
BRCA1-219ENST00000491747 SYNRGQ9UMZ2 1314 aa10.72□□□□□ -0.69
BRCA1-219ENST00000491747 LOC102724159A0A0B4J2E5 919 aa10.72□□□□□ -0.69
BRCA1-219ENST00000491747 GCOM1H8Y6P7 765 aaPredicted RBP10.72□□□□□ -0.69
BRCA1-219ENST00000491747 CTAGE5O15320 804 aa10.72□□□□□ -0.69
BRCA1-219ENST00000491747 DTNBO60941 627 aa10.72□□□□□ -0.69
BRCA1-219ENST00000491747 MYCNP04198 464 aaPredicted RBP10.72□□□□□ -0.69
BRCA1-219ENST00000491747 POLR2MP0CAP2 368 aa10.72□□□□□ -0.69
BRCA1-219ENST00000491747 STK3Q13188 491 aa10.72□□□□□ -0.69
BRCA1-219ENST00000491747 PWP2Q15269 919 aaKnown RBP10.72□□□□□ -0.69
BRCA1-219ENST00000491747 HEATR3Q7Z4Q2 680 aa10.72□□□□□ -0.69
BRCA1-219ENST00000491747 FCHSD1Q86WN1 690 aa10.72□□□□□ -0.69
BRCA1-219ENST00000491747 IL31RAQ8NI17 732 aa10.72□□□□□ -0.69
BRCA1-219ENST00000491747 NSUN6Q8TEA1 469 aaKnown RBP10.72□□□□□ -0.69
BRCA1-219ENST00000491747 PHKBQ93100 1093 aa10.72□□□□□ -0.69
BRCA1-219ENST00000491747 ZFP91Q96JP5 570 aaPredicted RBP10.72□□□□□ -0.69
BRCA1-219ENST00000491747 FUCA2Q9BTY2 467 aa10.72□□□□□ -0.69
BRCA1-219ENST00000491747 ALDH8A1Q9H2A2 487 aaPredicted RBP10.72□□□□□ -0.69
BRCA1-219ENST00000491747 C11orf49Q9H6J7 331 aa10.72□□□□□ -0.69
BRCA1-219ENST00000491747 VTA1Q9NP79 307 aa10.72□□□□□ -0.69
BRCA1-219ENST00000491747 MAP3K20Q9NYL2 800 aaKnown RBP10.72□□□□□ -0.69
BRCA1-219ENST00000491747 GNEQ9Y223 722 aaKnown RBP10.72□□□□□ -0.69
BRCA1-219ENST00000491747 MYH7BA7E2Y1 1941 aa10.72□□□□□ -0.69
BRCA1-219ENST00000491747 RBM47A0AV96 593 aaKnown RBP10.72□□□□□ -0.69
BRCA1-219ENST00000491747 DNM1LO00429 736 aa10.72□□□□□ -0.69
BRCA1-219ENST00000491747 DUSP11O75319 330 aaKnown RBP10.72□□□□□ -0.69
BRCA1-219ENST00000491747 GJB2P29033 226 aa10.72□□□□□ -0.69
BRCA1-219ENST00000491747 PLCB2Q00722 1185 aa10.72□□□□□ -0.69
BRCA1-219ENST00000491747 TNFAIP2Q03169 654 aa10.72□□□□□ -0.69
BRCA1-219ENST00000491747 PDE4DQ08499 809 aa10.72□□□□□ -0.69
BRCA1-219ENST00000491747 TRAF1Q13077 416 aa10.72□□□□□ -0.69
BRCA1-219ENST00000491747 PPP2R5BQ15173 497 aa10.72□□□□□ -0.69
BRCA1-219ENST00000491747 PKN1Q16512 942 aa10.72□□□□□ -0.69
BRCA1-219ENST00000491747 ARHGEF16Q5VV41 709 aa10.72□□□□□ -0.69
BRCA1-219ENST00000491747 SAMD3Q8N6K7 520 aa10.72□□□□□ -0.69
BRCA1-219ENST00000491747 ZNF274Q96GC6 653 aaPredicted RBP10.72□□□□□ -0.69
BRCA1-219ENST00000491747 TPCN1Q9ULQ1 816 aa10.72□□□□□ -0.69
BRCA1-219ENST00000491747 KIF3AQ9Y496 699 aa10.72□□□□□ -0.69
BRCA1-219ENST00000491747 DOCK5Q9H7D0 1870 aa10.71□□□□□ -0.69
BRCA1-219ENST00000491747 STXBP3O00186 592 aa10.71□□□□□ -0.69
BRCA1-219ENST00000491747 ADAMTS3O15072 1205 aa10.71□□□□□ -0.69
BRCA1-219ENST00000491747 ARIH2O95376 493 aa10.71□□□□□ -0.69
BRCA1-219ENST00000491747 NR3C2P08235 984 aa10.71□□□□□ -0.69
BRCA1-219ENST00000491747 CCDC192P0DO97 292 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms