RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 L1CAMP32004 1257 aa5.93□□□□□ -1.46
RTN4-215ENST00000491592 E4F1Q66K89 784 aaPredicted RBP5.93□□□□□ -1.46
RTN4-215ENST00000491592 MBLAC2Q68D91 279 aa5.93□□□□□ -1.46
RTN4-215ENST00000491592 DENND5AQ6IQ26 1287 aa5.93□□□□□ -1.46
RTN4-215ENST00000491592 ZNF280DQ6N043 979 aa5.93□□□□□ -1.46
RTN4-215ENST00000491592 CEP128Q6ZU80 1094 aa5.93□□□□□ -1.46
RTN4-215ENST00000491592 FMNL3Q8IVF7 1028 aa5.93□□□□□ -1.46
RTN4-215ENST00000491592 CCDC103Q8IW40 242 aa5.93□□□□□ -1.46
RTN4-215ENST00000491592 OXR1Q8N573 874 aa5.93□□□□□ -1.46
RTN4-215ENST00000491592 PRPF38AQ8NAV1 312 aaKnown RBP5.93□□□□□ -1.46
RTN4-215ENST00000491592 KREMEN2Q8NCW0 462 aa5.93□□□□□ -1.46
RTN4-215ENST00000491592 TMEM52Q8NDY8 209 aa5.93□□□□□ -1.46
RTN4-215ENST00000491592 FLAD1Q8NFF5 587 aa5.93□□□□□ -1.46
RTN4-215ENST00000491592 IPO9Q96P70 1041 aaKnown RBP5.93□□□□□ -1.46
RTN4-215ENST00000491592 TCEAL9Q9UHQ7 104 aa5.93□□□□□ -1.46
RTN4-215ENST00000491592 FBXO9Q9UK97 447 aaPredicted RBP5.93□□□□□ -1.46
RTN4-215ENST00000491592 TAF6LQ9Y6J9 622 aa5.93□□□□□ -1.46
RTN4-215ENST00000491592 SYNJ1O43426 1573 aa5.93□□□□□ -1.46
RTN4-215ENST00000491592 CCNB3Q8WWL7 1395 aa5.93□□□□□ -1.46
RTN4-215ENST00000491592 ENPP3O14638 875 aa5.92□□□□□ -1.46
RTN4-215ENST00000491592 NRDCO43847 1150 aa5.92□□□□□ -1.46
RTN4-215ENST00000491592 CDC45O75419 566 aa5.92□□□□□ -1.46
RTN4-215ENST00000491592 RAC2P15153 192 aa5.92□□□□□ -1.46
RTN4-215ENST00000491592 ERVFC1P60507 584 aa5.92□□□□□ -1.46
RTN4-215ENST00000491592 SAFB2Q14151 953 aaKnown RBP eCLIP5.92□□□□□ -1.46
RTN4-215ENST00000491592 NR0B2Q15466 257 aa5.92□□□□□ -1.46
RTN4-215ENST00000491592 TESK1Q15569 626 aa5.92□□□□□ -1.46
RTN4-215ENST00000491592 NTRK3Q16288 839 aa5.92□□□□□ -1.46
RTN4-215ENST00000491592 HSF5Q4G112 596 aaPredicted RBP5.92□□□□□ -1.46
RTN4-215ENST00000491592 HLA-DQA1Q5Y7H0 255 aa5.92□□□□□ -1.46
RTN4-215ENST00000491592 CCSAPQ6IQ19 270 aaPredicted RBP5.92□□□□□ -1.46
RTN4-215ENST00000491592 USP53Q70EK8 1073 aa5.92□□□□□ -1.46
RTN4-215ENST00000491592 HOMER1Q86YM7 354 aa5.92□□□□□ -1.46
RTN4-215ENST00000491592 JAMLQ86YT9 394 aa5.92□□□□□ -1.46
RTN4-215ENST00000491592 SCUBE1Q8IWY4 988 aa5.92□□□□□ -1.46
RTN4-215ENST00000491592 CXorf38Q8TB03 319 aa5.92□□□□□ -1.46
RTN4-215ENST00000491592 KISS1RQ969F8 398 aaPredicted RBP5.92□□□□□ -1.46
RTN4-215ENST00000491592 JMJD8Q96S16 334 aa5.92□□□□□ -1.46
RTN4-215ENST00000491592 MMP19Q99542 508 aa5.92□□□□□ -1.46
RTN4-215ENST00000491592 DHRS4Q9BTZ2 278 aa5.92□□□□□ -1.46
RTN4-215ENST00000491592 SP110Q9HB58 689 aa5.92□□□□□ -1.46
RTN4-215ENST00000491592 FANCLQ9NW38 375 aa5.92□□□□□ -1.46
RTN4-215ENST00000491592 TMEFF2Q9UIK5 374 aaPredicted RBP5.92□□□□□ -1.46
RTN4-215ENST00000491592 PRKAB1Q9Y478 270 aa5.92□□□□□ -1.46
RTN4-215ENST00000491592 MAP3K1Q13233 1512 aa5.92□□□□□ -1.46
RTN4-215ENST00000491592 PEG3Q9GZU2 1588 aa5.92□□□□□ -1.46
RTN4-215ENST00000491592 RAPGEF2Q9Y4G8 1499 aa5.91□□□□□ -1.46
RTN4-215ENST00000491592 A0A1W2PQ45 241 aaPredicted RBP5.91□□□□□ -1.46
RTN4-215ENST00000491592 A0A1W2PQY0 241 aa5.91□□□□□ -1.46
RTN4-215ENST00000491592 BLACEA4D250 179 aa5.91□□□□□ -1.46
RTN4-215ENST00000491592 DBX1A6NMT0 343 aa5.91□□□□□ -1.46
RTN4-215ENST00000491592 FARP2O94887 1054 aaPredicted RBP5.91□□□□□ -1.46
RTN4-215ENST00000491592 ZRANB2O95218 330 aaKnown RBP eCLIP5.91□□□□□ -1.46
RTN4-215ENST00000491592 COPB2P35606 906 aa5.91□□□□□ -1.46
RTN4-215ENST00000491592 GYS2P54840 703 aa5.91□□□□□ -1.46
RTN4-215ENST00000491592 RTP1P59025 263 aa5.91□□□□□ -1.46
RTN4-215ENST00000491592 SLC14A2Q15849 920 aa5.91□□□□□ -1.46
RTN4-215ENST00000491592 PKN1Q16512 942 aa5.91□□□□□ -1.46
RTN4-215ENST00000491592 TIGD5Q53EQ6 642 aa5.91□□□□□ -1.46
RTN4-215ENST00000491592 ATG4DQ86TL0 474 aaPredicted RBP5.91□□□□□ -1.46
RTN4-215ENST00000491592 CPNE8Q86YQ8 564 aa5.91□□□□□ -1.46
RTN4-215ENST00000491592 SPPL2CQ8IUH8 684 aa5.91□□□□□ -1.46
RTN4-215ENST00000491592 JDP2Q8WYK2 163 aa5.91□□□□□ -1.46
RTN4-215ENST00000491592 APPBP2Q92624 585 aa5.91□□□□□ -1.46
RTN4-215ENST00000491592 DIO2Q92813 273 aa5.91□□□□□ -1.46
RTN4-215ENST00000491592 C19orf44Q9H6X5 657 aa5.91□□□□□ -1.46
RTN4-215ENST00000491592 TYW1Q9NV66 732 aaKnown RBP5.91□□□□□ -1.46
RTN4-215ENST00000491592 CCDC163A0A0D9SF12 145 aa5.9□□□□□ -1.46
RTN4-215ENST00000491592 CCDC189A1A4V9 331 aa5.9□□□□□ -1.46
RTN4-215ENST00000491592 NOTOA8MTQ0 251 aa5.9□□□□□ -1.46
RTN4-215ENST00000491592 PLIN1O60240 522 aa5.9□□□□□ -1.46
RTN4-215ENST00000491592 EFEMP2O95967 443 aa5.9□□□□□ -1.46
RTN4-215ENST00000491592 C6orf222P0C671 652 aaPredicted RBP5.9□□□□□ -1.46
RTN4-215ENST00000491592 BDNFP23560 247 aa5.9□□□□□ -1.46
RTN4-215ENST00000491592 TRHRP34981 398 aaPredicted RBP5.9□□□□□ -1.46
RTN4-215ENST00000491592 LTBRP36941 435 aa5.9□□□□□ -1.46
RTN4-215ENST00000491592 DDX10Q13206 875 aaKnown RBP5.9□□□□□ -1.46
RTN4-215ENST00000491592 INF2Q27J81 1249 aa5.9□□□□□ -1.46
RTN4-215ENST00000491592 ZNF648Q5T619 568 aaPredicted RBP5.9□□□□□ -1.46
RTN4-215ENST00000491592 IQCEQ6IPM2 695 aa5.9□□□□□ -1.46
RTN4-215ENST00000491592 GALNT18Q6P9A2 607 aa5.9□□□□□ -1.46
RTN4-215ENST00000491592 PCGF5Q86SE9 256 aa5.9□□□□□ -1.46
RTN4-215ENST00000491592 LILRA2Q8N149 483 aa5.9□□□□□ -1.46
RTN4-215ENST00000491592 SDR16C5Q8N3Y7 309 aa5.9□□□□□ -1.46
RTN4-215ENST00000491592 MYLIPQ8WY64 445 aa5.9□□□□□ -1.46
RTN4-215ENST00000491592 RELTQ969Z4 430 aa5.9□□□□□ -1.46
RTN4-215ENST00000491592 PHF20Q9BVI0 1012 aa5.9□□□□□ -1.46
RTN4-215ENST00000491592 KRTAP4-9Q9BYQ8 210 aa5.9□□□□□ -1.46
RTN4-215ENST00000491592 TMX4Q9H1E5 349 aaPredicted RBP5.9□□□□□ -1.46
RTN4-215ENST00000491592 NCOA5Q9HCD5 579 aaKnown RBP5.9□□□□□ -1.46
RTN4-215ENST00000491592 IMPACTQ9P2X3 320 aa5.9□□□□□ -1.46
RTN4-215ENST00000491592 SFMBT1Q9UHJ3 866 aa5.9□□□□□ -1.46
RTN4-215ENST00000491592 GPR160Q9UJ42 338 aa5.9□□□□□ -1.46
RTN4-215ENST00000491592 NPFFR2Q9Y5X5 522 aa5.9□□□□□ -1.46
RTN4-215ENST00000491592 SETD5Q9C0A6 1442 aa5.9□□□□□ -1.47
RTN4-215ENST00000491592 WTIPA6NIX2 430 aaPredicted RBP5.89□□□□□ -1.47
RTN4-215ENST00000491592 ARNTLO00327 626 aa5.89□□□□□ -1.47
RTN4-215ENST00000491592 ZNF500O60304 480 aaPredicted RBP5.89□□□□□ -1.47
RTN4-215ENST00000491592 ASMTLO95671 621 aa5.89□□□□□ -1.47
RTN4-215ENST00000491592 DEKP35659 375 aaKnown RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms